RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 LAMA4Q16363 1823 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 KLF18A0A0U1RQI7 1052 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 TSPY2A6NKD2 308 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 SH2B2O14492 632 aaPredicted RBP14.34□□□□□ -0.11
MRPL55-227ENST00000475832 PFKFB2O60825 505 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 CYP2D6P10635 497 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 LIFRP42702 1097 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 STK3Q13188 491 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 CYB5R4Q7L1T6 521 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 GTF3C6Q969F1 213 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 LLPHQ9BRT6 129 aaKnown RBP14.34□□□□□ -0.11
MRPL55-227ENST00000475832 IDI2Q9BXS1 227 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 SWAP70Q9UH65 585 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
MRPL55-227ENST00000475832 SLC12A7Q9Y666 1083 aa14.34□□□□□ -0.11
MRPL55-227ENST00000475832 MYH2Q9UKX2 1941 aa14.33□□□□□ -0.11
MRPL55-227ENST00000475832 SHTN1A0MZ66 631 aa14.33□□□□□ -0.12
MRPL55-227ENST00000475832 GOLGA8BA8MQT2 603 aa14.33□□□□□ -0.12
MRPL55-227ENST00000475832 ENTPD3O75355 529 aa14.33□□□□□ -0.12
MRPL55-227ENST00000475832 WDHD1O75717 1129 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-227ENST00000475832 PDCP20941 246 aa14.33□□□□□ -0.12
MRPL55-227ENST00000475832 HIRAP54198 1017 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-227ENST00000475832 EVCP57679 992 aa14.33□□□□□ -0.12
MRPL55-227ENST00000475832 ANTXR2P58335 489 aa14.33□□□□□ -0.12
MRPL55-227ENST00000475832 ZNF280AP59817 542 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-227ENST00000475832 GRM1Q13255 1194 aa14.33□□□□□ -0.12
MRPL55-227ENST00000475832 PRPF38BQ5VTL8 546 aaKnown RBP14.33□□□□□ -0.12
MRPL55-227ENST00000475832 MTMR14Q8NCE2 650 aa14.33□□□□□ -0.12
MRPL55-227ENST00000475832 ZC3H15Q8WU90 426 aaKnown RBP14.33□□□□□ -0.12
MRPL55-227ENST00000475832 ZSCAN10Q96SZ4 725 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-227ENST00000475832 OSBPL5Q9H0X9 879 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-227ENST00000475832 TSKSQ9UJT2 592 aa14.33□□□□□ -0.12
MRPL55-227ENST00000475832 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 H7C1D1 291 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 CPLX1O14810 134 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 CDKL5O76039 1030 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 TSPY3P0CV98 308 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 TSPY8P0CW00 308 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 PDIA3P30101 505 aaKnown RBP14.32□□□□□ -0.12
MRPL55-227ENST00000475832 ECE1P42892 770 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 HMGN5P82970 282 aaKnown RBP14.32□□□□□ -0.12
MRPL55-227ENST00000475832 PPP4R3BQ5MIZ7 849 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 C16orf86Q6ZW13 317 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 SGMS1Q86VZ5 419 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 ZSCAN29Q8IWY8 852 aaPredicted RBP14.32□□□□□ -0.12
MRPL55-227ENST00000475832 NECAB1Q8N987 351 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 INCENPQ9NQS7 918 aa14.32□□□□□ -0.12
MRPL55-227ENST00000475832 CCDC196A0A1B0GTZ2 297 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 ZBTB43O43298 467 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 PRDM1O75626 825 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 LARGE1O95461 756 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 CALM1P0DP23 149 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 CALM2P0DP24 149 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 CALM3P0DP25 149 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 DDIT3P35638 169 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 TNNI2P48788 182 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 METAP2P50579 478 aaKnown RBP eCLIP14.31□□□□□ -0.12
MRPL55-227ENST00000475832 PLCD1P51178 756 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 RCAN1P53805 252 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 PPP2R5BQ15173 497 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 SLC4A8Q2Y0W8 1093 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 IFIT1BQ5T764 474 aaKnown RBP14.31□□□□□ -0.12
MRPL55-227ENST00000475832 MAP1SQ66K74 1059 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-227ENST00000475832 CRACR2BQ8N4Y2 399 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-227ENST00000475832 FAM184AQ8NB25 1140 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 TRPM4Q8TD43 1214 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 IGDCC4Q8TDY8 1250 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 TDRD3Q9H7E2 651 aaKnown RBP14.31□□□□□ -0.12
MRPL55-227ENST00000475832 LY9Q9HBG7 655 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 SERPINB13Q9UIV8 391 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 TNKSO95271 1327 aa14.31□□□□□ -0.12
MRPL55-227ENST00000475832 EGFRP00533 1210 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 GJB2P29033 226 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 CDK8P49336 464 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 TFAP4Q01664 338 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 DGKZQ13574 1117 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 COL9A3Q14050 684 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-227ENST00000475832 FKBP1CQ5VVH2 108 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 SAMD7Q7Z3H4 446 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 CATIPQ7Z7H3 387 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 DYNLL2Q96FJ2 89 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 CAPNS2Q96L46 248 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 PRMT6Q96LA8 375 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-227ENST00000475832 ZKSCAN3Q9BRR0 538 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 EHD4Q9H223 541 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 MYOZ2Q9NPC6 264 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 PI4KBQ9UBF8 816 aa14.3□□□□□ -0.12
MRPL55-227ENST00000475832 GOLGA8AA7E2F4 631 aa14.29□□□□□ -0.12
MRPL55-227ENST00000475832 CCT2P78371 535 aaKnown RBP14.29□□□□□ -0.12
MRPL55-227ENST00000475832 SCRN1Q12765 414 aa14.29□□□□□ -0.12
MRPL55-227ENST00000475832 APOA5Q6Q788 366 aa14.29□□□□□ -0.12
MRPL55-227ENST00000475832 FOXP4Q8IVH2 680 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-227ENST00000475832 GBP4Q96PP9 640 aa14.29□□□□□ -0.12
MRPL55-227ENST00000475832 KAT14Q9H8E8 782 aa14.29□□□□□ -0.12
MRPL55-227ENST00000475832 DDX4Q9NQI0 724 aaKnown RBP14.29□□□□□ -0.12
MRPL55-227ENST00000475832 TCP11L1Q9NUJ3 509 aa14.29□□□□□ -0.12
MRPL55-227ENST00000475832 ZNF70Q9UC06 446 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms