RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CEP126Q9P2H0 1117 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 SRRDQ9UH36 339 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.01□□□□□ -0.33
CALD1-217ENST00000475772 SALL1Q9NSC2 1324 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 RANBP2P49792 3224 aaKnown RBP13.01□□□□□ -0.33
CALD1-217ENST00000475772 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
CALD1-217ENST00000475772 TIMM10P62072 90 aa13□□□□□ -0.33
CALD1-217ENST00000475772 MAP2K5Q13163 448 aa13□□□□□ -0.33
CALD1-217ENST00000475772 IDI2Q9BXS1 227 aa13□□□□□ -0.33
CALD1-217ENST00000475772 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
CALD1-217ENST00000475772 GAKO14976 1311 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 DDTLA6NHG4 134 aaPredicted RBP12.99□□□□□ -0.33
CALD1-217ENST00000475772 CXCL11O14625 94 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 WDHD1O75717 1129 aaPredicted RBP12.99□□□□□ -0.33
CALD1-217ENST00000475772 CYP2C8P10632 490 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 RGS3P49796 1198 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 CCDC102BQ68D86 513 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 COPRSQ9NQ92 184 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 DDX4Q9NQI0 724 aaKnown RBP12.99□□□□□ -0.33
CALD1-217ENST00000475772 DENND2AQ9ULE3 1009 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 GABRQQ9UN88 632 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
CALD1-217ENST00000475772 DOCK2Q92608 1830 aa12.99□□□□□ -0.33
CALD1-217ENST00000475772 RFX7Q2KHR2 1363 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 GOLGA8CPA6NN73 597 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 H0YGN5 161 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 ENTPD3O75355 529 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 UBTFL1P0CB47 393 aaPredicted RBP12.98□□□□□ -0.33
CALD1-217ENST00000475772 PTPRAP18433 802 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 GRK4P32298 578 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 ZEB1P37275 1124 aaPredicted RBP12.98□□□□□ -0.33
CALD1-217ENST00000475772 IL15P40933 162 aaPredicted RBP12.98□□□□□ -0.33
CALD1-217ENST00000475772 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 ZNF384Q8TF68 577 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 SMC4Q9NTJ3 1288 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 AFG3L2Q9Y4W6 797 aa12.98□□□□□ -0.33
CALD1-217ENST00000475772 A0A0G2JLL6 359 aaPredicted RBP12.97□□□□□ -0.33
CALD1-217ENST00000475772 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
CALD1-217ENST00000475772 OATP04181 439 aa12.97□□□□□ -0.33
CALD1-217ENST00000475772 HOXD10P28358 340 aa12.97□□□□□ -0.33
CALD1-217ENST00000475772 PRKCZQ05513 592 aa12.97□□□□□ -0.33
CALD1-217ENST00000475772 RASGRF1Q13972 1273 aa12.97□□□□□ -0.33
CALD1-217ENST00000475772 PRRT2Q7Z6L0 340 aaPredicted RBP12.97□□□□□ -0.33
CALD1-217ENST00000475772 SCYL3Q8IZE3 742 aa12.97□□□□□ -0.33
CALD1-217ENST00000475772 MEIS3Q99687 375 aa12.97□□□□□ -0.33
CALD1-217ENST00000475772 GNL3LQ9NVN8 582 aaKnown RBP12.97□□□□□ -0.33
CALD1-217ENST00000475772 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
CALD1-217ENST00000475772 ZHX2Q9Y6X8 837 aa12.97□□□□□ -0.33
CALD1-217ENST00000475772 MYPNQ86TC9 1320 aa12.96□□□□□ -0.33
CALD1-217ENST00000475772 GJA8P48165 433 aa12.96□□□□□ -0.33
CALD1-217ENST00000475772 RHBDL3P58872 404 aa12.96□□□□□ -0.33
CALD1-217ENST00000475772 METTL3Q86U44 580 aaKnown RBP12.96□□□□□ -0.33
CALD1-217ENST00000475772 CCDC84Q86UT8 332 aaPredicted RBP12.96□□□□□ -0.33
CALD1-217ENST00000475772 RAET1EQ8TD07 263 aa12.96□□□□□ -0.33
CALD1-217ENST00000475772 WNT2BQ93097 391 aa12.96□□□□□ -0.33
CALD1-217ENST00000475772 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
CALD1-217ENST00000475772 PLSCR2Q9NRY7 297 aa12.96□□□□□ -0.33
CALD1-217ENST00000475772 GJB1P08034 283 aa12.95□□□□□ -0.34
CALD1-217ENST00000475772 CCL5P13501 91 aa12.95□□□□□ -0.34
CALD1-217ENST00000475772 PARK7Q99497 189 aaKnown RBP12.95□□□□□ -0.34
CALD1-217ENST00000475772 DOCK1Q14185 1865 aa12.95□□□□□ -0.34
CALD1-217ENST00000475772 GPR75-ASB3A0A0A6YYF3 556 aa12.94□□□□□ -0.34
CALD1-217ENST00000475772 A0A1B0GUL7 405 aa12.94□□□□□ -0.34
CALD1-217ENST00000475772 CTNND1O60716 968 aaKnown RBP12.94□□□□□ -0.34
CALD1-217ENST00000475772 BTDP43251 543 aa12.94□□□□□ -0.34
CALD1-217ENST00000475772 TFCP2Q12800 502 aa12.94□□□□□ -0.34
CALD1-217ENST00000475772 RRP1BQ14684 758 aaKnown RBP12.94□□□□□ -0.34
CALD1-217ENST00000475772 FASTKD5Q7L8L6 764 aaKnown RBP12.94□□□□□ -0.34
CALD1-217ENST00000475772 XAGE2Q96GT9 111 aa12.94□□□□□ -0.34
CALD1-217ENST00000475772 RNF208Q9H0X6 261 aa12.94□□□□□ -0.34
CALD1-217ENST00000475772 UNC93B1Q9H1C4 597 aa12.94□□□□□ -0.34
CALD1-217ENST00000475772 PRO3102Q9H379 93 aa12.94□□□□□ -0.34
CALD1-217ENST00000475772 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
CALD1-217ENST00000475772 PDS5AQ29RF7 1337 aaKnown RBP12.93□□□□□ -0.34
CALD1-217ENST00000475772 RCCD1A6NED2 376 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
CALD1-217ENST00000475772 FLT3LGP49771 235 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 RARSP54136 660 aaKnown RBP12.93□□□□□ -0.34
CALD1-217ENST00000475772 FCGRTP55899 365 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 MECOMQ03112 1051 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 PI16Q6UXB8 463 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 GADL1Q6ZQY3 521 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 ZGPATQ8N5A5 531 aaKnown RBP12.93□□□□□ -0.34
CALD1-217ENST00000475772 ANKK1Q8NFD2 765 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 DPF3Q92784 378 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 API5Q9BZZ5 524 aaKnown RBP12.93□□□□□ -0.34
CALD1-217ENST00000475772 HMG20BQ9P0W2 317 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 SLC45A1Q9Y2W3 748 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 ALPK3Q96L96 1907 aa12.93□□□□□ -0.34
CALD1-217ENST00000475772 MYO5AQ9Y4I1 1855 aaKnown RBP12.93□□□□□ -0.34
CALD1-217ENST00000475772 MROH7-TTC4A0A0A0MT08 1334 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 SOWAHBA6NEL2 793 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 FAM196BA6NMK8 535 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 SGPL1O95470 568 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 DNAJB2P25686 324 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 PICALMQ13492 652 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 MTX1Q13505 466 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms