RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 TBC1D2Q9BYX2 928 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 PORCNQ9H237 461 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 FLRT1Q9NZU1 646 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 RBPJLQ9UBG7 517 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 TACC3Q9Y6A5 838 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 UTYO14607 1347 aa12.61□□□□□ -0.39
CCHCR1-212ENST00000475684 FAM86C2PA6NEL3 165 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 ADCYAP1R1P41586 468 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 KCNQ1P51787 676 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 ERVK-9P63128 1117 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 ERVK-24P63145 666 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 TLE2Q04725 743 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 FLIIQ13045 1269 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 METTL24Q5JXM2 366 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 FERMT2Q96AC1 680 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 PBX4Q9BYU1 374 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 CHD9Q3L8U1 2897 aa12.6□□□□□ -0.39
CCHCR1-212ENST00000475684 GLRX3O76003 335 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 PDE8BO95263 885 aa12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 CLTBP09497 229 aa12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 PRDX5P30044 214 aa12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 PICALMQ13492 652 aa12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 PAGR1Q9BTK6 254 aa12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 OSBPL5Q9H0X9 879 aaPredicted RBP12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-212ENST00000475684 RLFQ13129 1914 aa12.58□□□□□ -0.39
CCHCR1-212ENST00000475684 FAM196BA6NMK8 535 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 GRXCR1A8MXD5 290 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 TBC1D12O60347 775 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 HOXA7P31268 230 aaPredicted RBP12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 CYP2C19P33261 490 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 C1orf53Q5VUE5 145 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 ANO1Q5XXA6 986 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 MICALL1Q8N3F8 863 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 TRPV1Q8NER1 839 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 AS3MTQ9HBK9 375 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 C11orf16Q9NQ32 467 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 TMOD4Q9NZQ9 345 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 NDUFB9Q9Y6M9 179 aa12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
CCHCR1-212ENST00000475684 SMIM22K7EJ46 135 aa12.57□□□□□ -0.4
CCHCR1-212ENST00000475684 GRM8O00222 908 aa12.57□□□□□ -0.4
CCHCR1-212ENST00000475684 KIAA0355O15063 1070 aa12.57□□□□□ -0.4
CCHCR1-212ENST00000475684 MTMR2Q13614 643 aa12.57□□□□□ -0.4
CCHCR1-212ENST00000475684 SKIV2LQ15477 1246 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-212ENST00000475684 LRRC24Q50LG9 513 aa12.57□□□□□ -0.4
CCHCR1-212ENST00000475684 WDR78Q5VTH9 848 aa12.57□□□□□ -0.4
CCHCR1-212ENST00000475684 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
CCHCR1-212ENST00000475684 IFIT1P09914 478 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-212ENST00000475684 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-212ENST00000475684 BEND3Q5T5X7 828 aa12.56□□□□□ -0.4
CCHCR1-212ENST00000475684 VGLL2Q8N8G2 317 aa12.56□□□□□ -0.4
CCHCR1-212ENST00000475684 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.56□□□□□ -0.46e-7■■■■■ 32.7
CCHCR1-212ENST00000475684 DDX4Q9NQI0 724 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-212ENST00000475684 TMEM39AQ9NV64 488 aa12.56□□□□□ -0.4
CCHCR1-212ENST00000475684 C9orf78Q9NZ63 289 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-212ENST00000475684 MSRAQ9UJ68 235 aa12.56□□□□□ -0.4
CCHCR1-212ENST00000475684 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
CCHCR1-212ENST00000475684 SLC15A5A6NIM6 579 aa12.55□□□□□ -0.4
CCHCR1-212ENST00000475684 PQBP1O60828 265 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-212ENST00000475684 PTPREP23469 700 aa12.55□□□□□ -0.4
CCHCR1-212ENST00000475684 CAP2P40123 477 aa12.55□□□□□ -0.4
CCHCR1-212ENST00000475684 BACE1P56817 501 aa12.55□□□□□ -0.4
CCHCR1-212ENST00000475684 GTF3C2Q8WUA4 911 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-212ENST00000475684 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCHCR1-212ENST00000475684 KIF16BQ96L93 1317 aa12.55□□□□□ -0.4
CCHCR1-212ENST00000475684 F6X3S4 739 aa12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 ERC2O15083 957 aa12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 CYBAP13498 195 aa12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 CCNA1P78396 465 aa12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 LRRC41Q15345 812 aa12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 PUM3Q15397 648 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 NPLOC4Q8TAT6 608 aa12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 TSR2Q969E8 191 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 WDR18Q9BV38 432 aa12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 SLC28A3Q9HAS3 691 aa12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 RFX7Q2KHR2 1363 aa12.54□□□□□ -0.4
CCHCR1-212ENST00000475684 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 PI4K2BG5E9Z4 385 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 SEPT4O43236 478 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 HOXC6P09630 235 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 FGFR2P21802 821 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 NHLH1Q02575 133 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 RRP1BQ14684 758 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 RAB30Q15771 203 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 CCDC174Q6PII3 467 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 SLC44A5Q8NCS7 719 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 HERVK_113Q902F9 699 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 NKX2-4Q9H2Z4 354 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 IVNS1ABPQ9Y6Y0 642 aa12.53□□□□□ -0.4
CCHCR1-212ENST00000475684 PRR33A8MZF0 331 aa12.52□□□□□ -0.41
CCHCR1-212ENST00000475684 C19orf81C9J6K1 198 aa12.52□□□□□ -0.41
CCHCR1-212ENST00000475684 APAF1O14727 1248 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms