RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 FAM196BA6NMK8 535 aa17.31■□□□□ 0.36
FAM3A-218ENST00000475657 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
FAM3A-218ENST00000475657 TNFRSF10AO00220 468 aa17.31■□□□□ 0.36
FAM3A-218ENST00000475657 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
FAM3A-218ENST00000475657 ERVK-24P63145 666 aa17.31■□□□□ 0.36
FAM3A-218ENST00000475657 CCAR1Q8IX12 1150 aaKnown RBP17.31■□□□□ 0.36
FAM3A-218ENST00000475657 RTP1P59025 263 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 MAP2K5Q13163 448 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 MTMR2Q13614 643 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 RRP1BQ14684 758 aaKnown RBP17.3■□□□□ 0.36
FAM3A-218ENST00000475657 Q3C1V9 767 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 C9orf50Q5SZB4 431 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 MFSD14CQ5VZR4 134 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 CCDC102BQ68D86 513 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 PORCNQ9H237 461 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 ABCF2Q9UG63 623 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 DDX20Q9UHI6 824 aaKnown RBP17.3■□□□□ 0.36
FAM3A-218ENST00000475657 MAST2Q6P0Q8 1798 aa17.3■□□□□ 0.36
FAM3A-218ENST00000475657 PEX10O60683 326 aa17.29■□□□□ 0.36
FAM3A-218ENST00000475657 ASNSP08243 561 aa17.29■□□□□ 0.36
FAM3A-218ENST00000475657 ATN1P54259 1190 aaPredicted RBP17.29■□□□□ 0.36
FAM3A-218ENST00000475657 RASGRF1Q13972 1273 aa17.29■□□□□ 0.36
FAM3A-218ENST00000475657 EDC3Q96F86 508 aaKnown RBP17.29■□□□□ 0.36
FAM3A-218ENST00000475657 GINM1Q9NU53 330 aa17.29■□□□□ 0.36
FAM3A-218ENST00000475657 GLRX3O76003 335 aaKnown RBP17.28■□□□□ 0.36
FAM3A-218ENST00000475657 PTPRCP08575 1304 aa17.27■□□□□ 0.36
FAM3A-218ENST00000475657 USP17L10C9JJH3 530 aa17.27■□□□□ 0.36
FAM3A-218ENST00000475657 LDHCP07864 332 aa17.27■□□□□ 0.36
FAM3A-218ENST00000475657 HOXC6P09630 235 aa17.27■□□□□ 0.36
FAM3A-218ENST00000475657 IL15P40933 162 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-218ENST00000475657 MECOMQ03112 1051 aa17.27■□□□□ 0.36
FAM3A-218ENST00000475657 ERICH6Q7L0X2 663 aa17.27■□□□□ 0.36
FAM3A-218ENST00000475657 PI4KBQ9UBF8 816 aa17.27■□□□□ 0.36
FAM3A-218ENST00000475657 LTBP2Q14767 1821 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 PLA2G5P39877 138 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 CCNA1P78396 465 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 GSTO1P78417 241 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 SNX17Q15036 470 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 POTEEQ6S8J3 1075 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 SLC39A5Q6ZMH5 540 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 ARRDC4Q8NCT1 418 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 ZNF384Q8TF68 577 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 DHX36Q9H2U1 1008 aaKnown RBP17.26■□□□□ 0.35
FAM3A-218ENST00000475657 ATP11BQ9Y2G3 1177 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 RABGAP1Q9Y3P9 1069 aa17.26■□□□□ 0.35
FAM3A-218ENST00000475657 SLC15A5A6NIM6 579 aa17.25■□□□□ 0.35
FAM3A-218ENST00000475657 IGHA2P01877 340 aa17.25■□□□□ 0.35
FAM3A-218ENST00000475657 C1orf53Q5VUE5 145 aa17.25■□□□□ 0.35
FAM3A-218ENST00000475657 METTL16Q86W50 562 aaKnown RBP17.25■□□□□ 0.35
FAM3A-218ENST00000475657 BADQ92934 168 aa17.25■□□□□ 0.35
FAM3A-218ENST00000475657 SIL1Q9H173 461 aa17.25■□□□□ 0.35
FAM3A-218ENST00000475657 FLRT1Q9NZU1 646 aa17.25■□□□□ 0.35
FAM3A-218ENST00000475657 PTPREP23469 700 aa17.24■□□□□ 0.35
FAM3A-218ENST00000475657 ADORA1P30542 326 aa17.24■□□□□ 0.35
FAM3A-218ENST00000475657 ATP2B2Q01814 1243 aa17.24■□□□□ 0.35
FAM3A-218ENST00000475657 MRPL50Q8N5N7 158 aaKnown RBP17.24■□□□□ 0.35
FAM3A-218ENST00000475657 PAGR1Q9BTK6 254 aa17.24■□□□□ 0.35
FAM3A-218ENST00000475657 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
FAM3A-218ENST00000475657 BDP1A6H8Y1 2624 aa17.23■□□□□ 0.35
FAM3A-218ENST00000475657 CNGA1P29973 690 aa17.23■□□□□ 0.35
FAM3A-218ENST00000475657 FOXP4Q8IVH2 680 aaPredicted RBP17.23■□□□□ 0.35
FAM3A-218ENST00000475657 NSUN4Q96CB9 384 aaKnown RBP17.23■□□□□ 0.35
FAM3A-218ENST00000475657 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
FAM3A-218ENST00000475657 EMILIN3Q9NT22 766 aa17.23■□□□□ 0.35
FAM3A-218ENST00000475657 FRMPD3Q5JV73 1810 aa17.23■□□□□ 0.35
FAM3A-218ENST00000475657 ATAD5Q96QE3 1844 aa17.23■□□□□ 0.35
FAM3A-218ENST00000475657 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
FAM3A-218ENST00000475657 JAG1P78504 1218 aa17.22■□□□□ 0.35
FAM3A-218ENST00000475657 GRB14Q14449 540 aa17.22■□□□□ 0.35
FAM3A-218ENST00000475657 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
FAM3A-218ENST00000475657 USP38Q8NB14 1042 aa17.22■□□□□ 0.35
FAM3A-218ENST00000475657 ATXN2LQ8WWM7 1075 aaKnown RBP17.22■□□□□ 0.35
FAM3A-218ENST00000475657 PRDM5Q9NQX1 630 aaPredicted RBP17.22■□□□□ 0.35
FAM3A-218ENST00000475657 KBTBD13C9JR72 458 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 CNMDO75829 334 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 CYBAP13498 195 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 TIMM10P62072 90 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
FAM3A-218ENST00000475657 GRIN2CQ14957 1233 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 TRIM60Q495X7 471 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 GJC2Q5T442 439 aaPredicted RBP17.21■□□□□ 0.35
FAM3A-218ENST00000475657 LBX2Q6XYB7 198 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 TEX11Q8IYF3 940 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 TRPV1Q8NER1 839 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 FAM122AQ96E09 287 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 COPRSQ9NQ92 184 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 RLFQ13129 1914 aa17.21■□□□□ 0.35
FAM3A-218ENST00000475657 TRIM43BA6NCK2 446 aa17.2■□□□□ 0.34
FAM3A-218ENST00000475657 CYP2C19P33261 490 aa17.2■□□□□ 0.34
FAM3A-218ENST00000475657 TRIM43Q96BQ3 446 aaPredicted RBP17.2■□□□□ 0.34
FAM3A-218ENST00000475657 CDCA7LQ96GN5 454 aa17.2■□□□□ 0.34
FAM3A-218ENST00000475657 RNPC3Q96LT9 517 aaKnown RBP17.2■□□□□ 0.34
FAM3A-218ENST00000475657 DNAJC18Q9H819 358 aa17.2■□□□□ 0.34
FAM3A-218ENST00000475657 RAPGEFL1Q9UHV5 662 aa17.2■□□□□ 0.34
FAM3A-218ENST00000475657 ZBTB21Q9ULJ3 1066 aa17.2■□□□□ 0.34
FAM3A-218ENST00000475657 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
FAM3A-218ENST00000475657 IVNS1ABPQ9Y6Y0 642 aa17.2■□□□□ 0.34
FAM3A-218ENST00000475657 USP17L15C9J2P7 530 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 USP17L13C9JLJ4 530 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms