RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 SHISA8B8ZZ34 492 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 NID1P14543 1247 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 CD68P34810 354 aaPredicted RBP7.8□□□□□ -1.16
SDHB-205ENST00000475506 ETF1P62495 437 aaKnown RBP7.8□□□□□ -1.16
SDHB-205ENST00000475506 ERVK-24P63145 666 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 SRSF11Q05519 484 aaKnown RBP7.8□□□□□ -1.16
SDHB-205ENST00000475506 TCEA2Q15560 299 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 UBE3DQ7Z6J8 389 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 PPFIBP1Q86W92 1011 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 MCATQ8IVS2 390 aaKnown RBP7.8□□□□□ -1.16
SDHB-205ENST00000475506 TMEM192Q8IY95 271 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 GALNT6Q8NCL4 622 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 UBASH3BQ8TF42 649 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 FBRSQ9HAH7 460 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 KLHL42Q9P2K6 505 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 SUSD2Q9UGT4 822 aa7.8□□□□□ -1.16
SDHB-205ENST00000475506 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
SDHB-205ENST00000475506 MARCH6O60337 910 aa7.79□□□□□ -1.16
SDHB-205ENST00000475506 ADAMTS2O95450 1211 aa7.79□□□□□ -1.16
SDHB-205ENST00000475506 VIL1P09327 827 aaKnown RBP7.79□□□□□ -1.16
SDHB-205ENST00000475506 SLC7A5Q01650 507 aa7.79□□□□□ -1.16
SDHB-205ENST00000475506 GNPTABQ3T906 1256 aa7.79□□□□□ -1.16
SDHB-205ENST00000475506 ZBTB38Q8NAP3 1195 aaPredicted RBP7.79□□□□□ -1.16
SDHB-205ENST00000475506 ZSWIM2Q8NEG5 633 aa7.79□□□□□ -1.16
SDHB-205ENST00000475506 TMEM87BQ96K49 555 aa7.79□□□□□ -1.16
SDHB-205ENST00000475506 CWC22Q9HCG8 908 aaKnown RBP7.79□□□□□ -1.16
SDHB-205ENST00000475506 UBOX5O94941 541 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 SLFN14P0C7P3 912 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 HCLS1P14317 486 aaPredicted RBP7.78□□□□□ -1.16
SDHB-205ENST00000475506 RAG1P15918 1043 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 CBX2Q14781 532 aaPredicted RBP7.78□□□□□ -1.16
SDHB-205ENST00000475506 NKG7Q16617 165 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 TMEM67Q5HYA8 995 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 NPAS3Q8IXF0 933 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 SLFN12Q8IYM2 578 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 FAM13CQ8NE31 585 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 KIF2CQ99661 725 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 DISC1Q9NRI5 854 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 CRIM1Q9NZV1 1036 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 SYNGAP1Q96PV0 1343 aa7.78□□□□□ -1.16
SDHB-205ENST00000475506 FANCGO15287 622 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 OIP5O43482 229 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 WISP1O95388 367 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 NEFMP07197 916 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 ID3Q02535 119 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 AKAP4Q5JQC9 854 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 Q6ZNB5 142 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 SLC6A18Q96N87 628 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 DPH2Q9BQC3 489 aaPredicted RBP7.77□□□□□ -1.17
SDHB-205ENST00000475506 FAM126AQ9BYI3 521 aaPredicted RBP7.77□□□□□ -1.17
SDHB-205ENST00000475506 EPN3Q9H201 632 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 FAM86C1Q9NVL1 165 aa7.77□□□□□ -1.17
SDHB-205ENST00000475506 C9IYK1 514 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 RGS13O14921 159 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 HOXB4P17483 251 aaPredicted RBP7.76□□□□□ -1.17
SDHB-205ENST00000475506 POU3F3P20264 500 aaPredicted RBP7.76□□□□□ -1.17
SDHB-205ENST00000475506 L1CAMP32004 1257 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 PMS1P54277 932 aaKnown RBP7.76□□□□□ -1.17
SDHB-205ENST00000475506 LONRF2Q1L5Z9 754 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 EXOSC6Q5RKV6 272 aaKnown RBP7.76□□□□□ -1.17
SDHB-205ENST00000475506 TDRD10Q5VZ19 366 aaKnown RBP7.76□□□□□ -1.17
SDHB-205ENST00000475506 MAP4K3Q8IVH8 894 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 MRPL41Q8IXM3 137 aaKnown RBP7.76□□□□□ -1.17
SDHB-205ENST00000475506 SYNPOQ8N3V7 929 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 EXOC2Q96KP1 924 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 FANCD2OSQ96PS1 177 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 TMPRSS13Q9BYE2 586 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 TMX1Q9H3N1 280 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 ARHGEF4Q9NR80 690 aa7.76□□□□□ -1.17
SDHB-205ENST00000475506 DDX56Q9NY93 547 aaKnown RBP7.76□□□□□ -1.17
SDHB-205ENST00000475506 A0A1W2PQU0 124 aa7.75□□□□□ -1.17
SDHB-205ENST00000475506 DLL1O00548 723 aa7.75□□□□□ -1.17
SDHB-205ENST00000475506 YARSP54577 528 aaKnown RBP7.75□□□□□ -1.17
SDHB-205ENST00000475506 PLEKHG6Q3KR16 790 aa7.75□□□□□ -1.17
SDHB-205ENST00000475506 TM4SF20Q53R12 229 aa7.75□□□□□ -1.17
SDHB-205ENST00000475506 HP1BP3Q5SSJ5 553 aaPredicted RBP7.75□□□□□ -1.17
SDHB-205ENST00000475506 YOD1Q5VVQ6 348 aaPredicted RBP7.75□□□□□ -1.17
SDHB-205ENST00000475506 SLC6A19Q695T7 634 aa7.75□□□□□ -1.17
SDHB-205ENST00000475506 HID1Q8IV36 788 aa7.75□□□□□ -1.17
SDHB-205ENST00000475506 DHX37Q8IY37 1157 aaKnown RBP7.75□□□□□ -1.17
SDHB-205ENST00000475506 LRRC47Q8N1G4 583 aaKnown RBP7.75□□□□□ -1.17
SDHB-205ENST00000475506 BAHD1Q8TBE0 780 aaPredicted RBP7.75□□□□□ -1.17
SDHB-205ENST00000475506 KISS1RQ969F8 398 aaPredicted RBP7.75□□□□□ -1.17
SDHB-205ENST00000475506 LGR4Q9BXB1 951 aa7.75□□□□□ -1.17
SDHB-205ENST00000475506 RAD18Q9NS91 495 aa7.75□□□□□ -1.17
SDHB-205ENST00000475506 SUCOQ9UBS9 1254 aaKnown RBP7.75□□□□□ -1.17
SDHB-205ENST00000475506 TP53P04637 393 aaPredicted RBP7.74□□□□□ -1.17
SDHB-205ENST00000475506 CCNFP41002 786 aa7.74□□□□□ -1.17
SDHB-205ENST00000475506 HNRNPUQ00839 825 aaKnown RBP eCLIP7.74□□□□□ -1.17
SDHB-205ENST00000475506 SLBPQ14493 270 aaKnown RBP eCLIP7.74□□□□□ -1.17
SDHB-205ENST00000475506 FAM209AQ5JX71 171 aa7.74□□□□□ -1.17
SDHB-205ENST00000475506 KRT26Q7Z3Y9 468 aa7.74□□□□□ -1.17
SDHB-205ENST00000475506 PHACTR4Q8IZ21 702 aa7.74□□□□□ -1.17
SDHB-205ENST00000475506 ZNF513Q8N8E2 541 aaPredicted RBP7.74□□□□□ -1.17
SDHB-205ENST00000475506 RNF214Q8ND24 703 aa7.74□□□□□ -1.17
SDHB-205ENST00000475506 NINJ1Q92982 152 aa7.74□□□□□ -1.17
SDHB-205ENST00000475506 SGSM3Q96HU1 749 aa7.74□□□□□ -1.17
SDHB-205ENST00000475506 SLC26A8Q96RN1 970 aa7.74□□□□□ -1.17
SDHB-205ENST00000475506 METTL14Q9HCE5 456 aaKnown RBP7.74□□□□□ -1.17
SDHB-205ENST00000475506 PICK1Q9NRD5 415 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms