RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SPP2Q13103 211 aa18.82■□□□□ 0.6
CPSF3-203ENST00000475482 TATDN1Q6P1N9 297 aa18.82■□□□□ 0.6
CPSF3-203ENST00000475482 PLEKHM2Q8IWE5 1019 aa18.82■□□□□ 0.6
CPSF3-203ENST00000475482 PROCA1Q8NCQ7 364 aaPredicted RBP18.82■□□□□ 0.6
CPSF3-203ENST00000475482 GPATCH3Q96I76 525 aa18.82■□□□□ 0.6
CPSF3-203ENST00000475482 SAP30BPQ9UHR5 308 aaKnown RBP18.82■□□□□ 0.6
CPSF3-203ENST00000475482 AGTPBP1Q9UPW5 1226 aa18.82■□□□□ 0.6
CPSF3-203ENST00000475482 TNRC18O15417 2968 aaPredicted RBP18.82■□□□□ 0.6
CPSF3-203ENST00000475482 MAGEB6P1A0A0J9YX57 407 aa18.81■□□□□ 0.6
CPSF3-203ENST00000475482 HLA-DOAP06340 250 aa18.81■□□□□ 0.6
CPSF3-203ENST00000475482 USP5P45974 858 aa18.81■□□□□ 0.6
CPSF3-203ENST00000475482 BMP2KLQ5H9B9 411 aa18.81■□□□□ 0.6
CPSF3-203ENST00000475482 GADL1Q6ZQY3 521 aa18.81■□□□□ 0.6
CPSF3-203ENST00000475482 OSBPL3Q9H4L5 887 aa18.81■□□□□ 0.6
CPSF3-203ENST00000475482 NAV1Q8NEY1 1877 aa18.81■□□□□ 0.6
CPSF3-203ENST00000475482 DOCK3Q8IZD9 2030 aa18.8■□□□□ 0.6
CPSF3-203ENST00000475482 ADD2P35612 726 aa18.8■□□□□ 0.6
CPSF3-203ENST00000475482 PRMT2P55345 433 aa18.8■□□□□ 0.6
CPSF3-203ENST00000475482 KIF22Q14807 665 aa18.8■□□□□ 0.6
CPSF3-203ENST00000475482 CRACR2BQ8N4Y2 399 aaPredicted RBP18.8■□□□□ 0.6
CPSF3-203ENST00000475482 AS3MTQ9HBK9 375 aa18.8■□□□□ 0.6
CPSF3-203ENST00000475482 SERPINB13Q9UIV8 391 aa18.8■□□□□ 0.6
CPSF3-203ENST00000475482 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
CPSF3-203ENST00000475482 MX1P20591 662 aa18.79■□□□□ 0.6
CPSF3-203ENST00000475482 SHROOM1Q2M3G4 852 aaPredicted RBP18.79■□□□□ 0.6
CPSF3-203ENST00000475482 TREML2Q5T2D2 321 aa18.79■□□□□ 0.6
CPSF3-203ENST00000475482 TTC6Q86TZ1 520 aa18.79■□□□□ 0.6
CPSF3-203ENST00000475482 TRIM47Q96LD4 638 aa18.79■□□□□ 0.6
CPSF3-203ENST00000475482 BCL11AQ9H165 835 aa18.79■□□□□ 0.6
CPSF3-203ENST00000475482 ECHDC1Q9NTX5 307 aa18.79■□□□□ 0.6
CPSF3-203ENST00000475482 ZBTB21Q9ULJ3 1066 aa18.79■□□□□ 0.6
CPSF3-203ENST00000475482 PTCH2Q9Y6C5 1203 aa18.79■□□□□ 0.6
CPSF3-203ENST00000475482 BRCA2P51587 3418 aa18.79■□□□□ 0.6
CPSF3-203ENST00000475482 PSMC4P43686 418 aa18.78■□□□□ 0.6
CPSF3-203ENST00000475482 PLCD1P51178 756 aa18.78■□□□□ 0.6
CPSF3-203ENST00000475482 PDE1AP54750 535 aa18.78■□□□□ 0.6
CPSF3-203ENST00000475482 BACE1P56817 501 aa18.78■□□□□ 0.6
CPSF3-203ENST00000475482 GABPAQ06546 454 aa18.78■□□□□ 0.6
CPSF3-203ENST00000475482 UBE3CQ15386 1083 aa18.78■□□□□ 0.6
CPSF3-203ENST00000475482 LCORLQ8N3X6 602 aa18.78■□□□□ 0.6
CPSF3-203ENST00000475482 ZNF333Q96JL9 665 aa18.78■□□□□ 0.6
CPSF3-203ENST00000475482 CRNKL1Q9BZJ0 848 aaKnown RBP18.78■□□□□ 0.6
CPSF3-203ENST00000475482 STAP2Q9UGK3 403 aa18.78■□□□□ 0.6
CPSF3-203ENST00000475482 HMGCS2P54868 508 aa18.77■□□□□ 0.6
CPSF3-203ENST00000475482 TRIM34Q9BYJ4 488 aa18.77■□□□□ 0.6
CPSF3-203ENST00000475482 DCP1AQ9NPI6 582 aaPredicted RBP18.77■□□□□ 0.6
CPSF3-203ENST00000475482 SRRDQ9UH36 339 aa18.77■□□□□ 0.6
CPSF3-203ENST00000475482 TTC41PQ6P2S7 1318 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 C19orf81C9J6K1 198 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 ERC2O15083 957 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 GDF11O95390 407 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 SLC4A8Q2Y0W8 1093 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 SLFNL1Q499Z3 407 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 TTC22Q5TAA0 569 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 BACH2Q9BYV9 841 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.76■□□□□ 0.59
CPSF3-203ENST00000475482 PNMA3Q9UL41 463 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 TAOK2Q9UL54 1235 aa18.76■□□□□ 0.59
CPSF3-203ENST00000475482 BAZ2AQ9UIF9 1905 aaKnown RBP18.76■□□□□ 0.59
CPSF3-203ENST00000475482 CHGBP05060 677 aa18.75■□□□□ 0.59
CPSF3-203ENST00000475482 OSBPP22059 807 aa18.75■□□□□ 0.59
CPSF3-203ENST00000475482 HOXD10P28358 340 aa18.75■□□□□ 0.59
CPSF3-203ENST00000475482 HOXA7P31268 230 aaPredicted RBP18.75■□□□□ 0.59
CPSF3-203ENST00000475482 SHMT1P34896 483 aa18.75■□□□□ 0.59
CPSF3-203ENST00000475482 MTMR2Q13614 643 aa18.75■□□□□ 0.59
CPSF3-203ENST00000475482 SDR42E1Q8WUS8 393 aa18.75■□□□□ 0.59
CPSF3-203ENST00000475482 SALL3Q9BXA9 1300 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 USP17L10C9JJH3 530 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 GH2P01242 217 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 EVX2Q03828 476 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 FAM110CQ1W6H9 321 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 SLC9C1Q4G0N8 1177 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 NBPF11Q86T75 865 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 SMCR8Q8TEV9 937 aaPredicted RBP18.74■□□□□ 0.59
CPSF3-203ENST00000475482 ASCC2Q9H1I8 757 aaPredicted RBP18.74■□□□□ 0.59
CPSF3-203ENST00000475482 ARMT1Q9H993 441 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 ATP8A2Q9NTI2 1148 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 MCM9Q9NXL9 1143 aa18.74■□□□□ 0.59
CPSF3-203ENST00000475482 POTEFA5A3E0 1075 aa18.73■□□□□ 0.59
CPSF3-203ENST00000475482 MBD4O95243 580 aa18.73■□□□□ 0.59
CPSF3-203ENST00000475482 POLR3DP05423 398 aaPredicted RBP18.73■□□□□ 0.59
CPSF3-203ENST00000475482 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
CPSF3-203ENST00000475482 FCGRTP55899 365 aa18.73■□□□□ 0.59
CPSF3-203ENST00000475482 PABPC4Q13310 644 aaKnown RBP eCLIP18.73■□□□□ 0.59
CPSF3-203ENST00000475482 ZSCAN25Q6NSZ9 544 aa18.73■□□□□ 0.59
CPSF3-203ENST00000475482 KBTBD3Q8NAB2 608 aa18.73■□□□□ 0.59
CPSF3-203ENST00000475482 TSHZ2Q9NRE2 1034 aa18.73■□□□□ 0.59
CPSF3-203ENST00000475482 EMILIN3Q9NT22 766 aa18.73■□□□□ 0.59
CPSF3-203ENST00000475482 MKI67P46013 3256 aaKnown RBP18.73■□□□□ 0.59
CPSF3-203ENST00000475482 MYH8P13535 1937 aa18.72■□□□□ 0.59
CPSF3-203ENST00000475482 PRKAB2O43741 272 aa18.72■□□□□ 0.59
CPSF3-203ENST00000475482 GLRX3O76003 335 aaKnown RBP18.72■□□□□ 0.59
CPSF3-203ENST00000475482 FMNL1O95466 1100 aaPredicted RBP18.72■□□□□ 0.59
CPSF3-203ENST00000475482 GUCY1A2P33402 732 aa18.72■□□□□ 0.59
CPSF3-203ENST00000475482 C8orf34Q49A92 452 aa18.72■□□□□ 0.59
CPSF3-203ENST00000475482 CERKLQ49MI3 558 aaPredicted RBP18.72■□□□□ 0.59
CPSF3-203ENST00000475482 CASC1Q6TDU7 716 aa18.72■□□□□ 0.59
CPSF3-203ENST00000475482 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
CPSF3-203ENST00000475482 C12orf42Q96LP6 360 aa18.72■□□□□ 0.59
CPSF3-203ENST00000475482 PUS7LQ9H0K6 701 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms