RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 MKNK2Q9HBH9 465 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 SENP2Q9HC62 589 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 ZNF277Q9NRM2 450 aaPredicted RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 USP40Q9NVE5 1235 aa11.92□□□□□ -0.5
PCCB-213ENST00000475214 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 DDX49Q9Y6V7 483 aaKnown RBP11.92□□□□□ -0.5
PCCB-213ENST00000475214 CDK5RAP2Q96SN8 1893 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 FLT1P17948 1338 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 SMIM22K7EJ46 135 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 CAPN15O75808 1086 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 CALM1P0DP23 149 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 CALM2P0DP24 149 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 CALM3P0DP25 149 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 ADD1P35611 737 aaKnown RBP11.91□□□□□ -0.5
PCCB-213ENST00000475214 CRKP46108 304 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 SCNN1DP51172 638 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 EIF6P56537 245 aaKnown RBP11.91□□□□□ -0.5
PCCB-213ENST00000475214 GSE1Q14687 1217 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 SEC23AQ15436 765 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 FOXD4L6Q3SYB3 417 aaPredicted RBP11.91□□□□□ -0.5
PCCB-213ENST00000475214 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 FOXD4L3Q6VB84 417 aaPredicted RBP11.91□□□□□ -0.5
PCCB-213ENST00000475214 CATIPQ7Z7H3 387 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 ZNF654Q8IZM8 581 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 RGS22Q8NE09 1264 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 SAP30BPQ9UHR5 308 aaKnown RBP11.91□□□□□ -0.5
PCCB-213ENST00000475214 NID2Q14112 1375 aa11.91□□□□□ -0.5
PCCB-213ENST00000475214 MYH1P12882 1939 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 FDPSP14324 419 aaKnown RBP11.9□□□□□ -0.5
PCCB-213ENST00000475214 RXRAP19793 462 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 SSRP1Q08945 709 aaKnown RBP11.9□□□□□ -0.5
PCCB-213ENST00000475214 RTN1Q16799 776 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 KLHL40Q2TBA0 621 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 SLC4A8Q2Y0W8 1093 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
PCCB-213ENST00000475214 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 CCDC144CPQ8IYA2 1237 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 GPC2Q8N158 579 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 ENAHQ8N8S7 591 aaPredicted RBP11.9□□□□□ -0.5
PCCB-213ENST00000475214 NUP133Q8WUM0 1156 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 WASF1Q92558 559 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 C8orf76Q96K31 380 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 ZDHHC15Q96MV8 337 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 KCNQ5Q9NR82 932 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 HACL1Q9UJ83 578 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 FOCADQ5VW36 1801 aa11.9□□□□□ -0.5
PCCB-213ENST00000475214 MYO3BQ8WXR4 1341 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 FZD9O00144 591 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 DDAH1O94760 285 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 MBD3O95983 291 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 CDC27P30260 824 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 PLCD1P51178 756 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 RBM5P52756 815 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCCB-213ENST00000475214 KRT85P78386 507 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 TFAP4Q01664 338 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 EVX2Q03828 476 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 DNM1Q05193 864 aaKnown RBP11.89□□□□□ -0.51
PCCB-213ENST00000475214 PICALMQ13492 652 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 FAM47AQ5JRC9 791 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 FERMT3Q86UX7 667 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 FANCBQ8NB91 859 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 TMEM87AQ8NBN3 555 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 DYNLL2Q96FJ2 89 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 CHAMP1Q96JM3 812 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 RBM28Q9NW13 759 aaKnown RBP11.89□□□□□ -0.51
PCCB-213ENST00000475214 SERPINA10Q9UK55 444 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 CNPY2Q9Y2B0 182 aa11.89□□□□□ -0.51
PCCB-213ENST00000475214 STK36Q9NRP7 1315 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 TSPY3P0CV98 308 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 TSPY8P0CW00 308 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 IFNAR1P17181 557 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
PCCB-213ENST00000475214 CDK8P49336 464 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 FOSBP53539 338 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 RESTQ13127 1097 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 TRIM29Q14134 588 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 NTRK3Q16288 839 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 APOBEC3HQ6NTF7 200 aaKnown RBP11.88□□□□□ -0.51
PCCB-213ENST00000475214 CDC42EP5Q6NZY7 148 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 USP48Q86UV5 1035 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 DGKHQ86XP1 1220 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 TRIM22Q8IYM9 498 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 ALG1Q9BT22 464 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 TAF1DQ9H5J8 278 aaPredicted RBP11.88□□□□□ -0.51
PCCB-213ENST00000475214 FAM217BQ9NTX9 383 aaPredicted RBP11.88□□□□□ -0.51
PCCB-213ENST00000475214 TCP11L1Q9NUJ3 509 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 SCN9AQ15858 1988 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 DDX60LQ5H9U9 1706 aaKnown RBP11.88□□□□□ -0.51
PCCB-213ENST00000475214 SCN4AP35499 1836 aa11.88□□□□□ -0.51
PCCB-213ENST00000475214 YDJCA8MPS7 323 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 PPFIA3O75145 1194 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
PCCB-213ENST00000475214 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
PCCB-213ENST00000475214 HLA-DOAP06340 250 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 RASA1P20936 1047 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms