RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ATP13A1Q9HD20 1204 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 CD320Q9NPF0 282 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 CNOT6Q9ULM6 557 aaKnown RBP1.88□□□□□ -2.11
HDAC9-222ENST00000474742 TRAK1Q9UPV9 953 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 PITPNM2Q9BZ72 1349 aa1.88□□□□□ -2.11
HDAC9-222ENST00000474742 TMEM238LA0A1B0GVL6 79 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 ZNF862O60290 1169 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 PSPNO60542 156 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 CBX7O95931 251 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 NEFMP07197 916 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 CELA3BP08861 270 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 MED14OSP0DP75 135 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 PDIA4P13667 645 aaKnown RBP1.87□□□□□ -2.11
HDAC9-222ENST00000474742 GLDCP23378 1020 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 PDE6BP35913 854 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 PLCB3Q01970 1234 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 NKPD1Q17RQ9 610 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 LARP7Q4G0J3 582 aaKnown RBP eCLIP1.87□□□□□ -2.11
HDAC9-222ENST00000474742 ZNF385BQ569K4 471 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 PRPF40BQ6NWY9 871 aaKnown RBP1.87□□□□□ -2.11
HDAC9-222ENST00000474742 NXPE4Q6UWF7 544 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 MPRIPQ6WCQ1 1025 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 ZNF605Q86T29 641 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 TMEM151BQ8IW70 566 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 MFSD4AQ8N468 514 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 UBE2FQ969M7 185 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 C20orf173Q96LM9 149 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 EMILIN2Q9BXX0 1053 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 KRTAP9-3Q9BYQ3 159 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 BCO2Q9BYV7 579 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 TMPRSS5Q9H3S3 457 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 KRT82Q9NSB4 513 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 ZSWIM5Q9P217 1185 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 CSADQ9Y600 493 aa1.87□□□□□ -2.11
HDAC9-222ENST00000474742 ANKRD33BA6NCL7 494 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 PAGE1O75459 146 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 KRT1P04264 644 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 ARNTP27540 789 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 MAPK8P45983 427 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 FCGRTP55899 365 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 ERVK-24P63145 666 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 FGD1P98174 961 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 PTPN12Q05209 780 aaKnown RBP1.86□□□□□ -2.11
HDAC9-222ENST00000474742 RPS26P11Q5JNZ5 115 aaPredicted RBP1.86□□□□□ -2.11
HDAC9-222ENST00000474742 PPM1JQ5JR12 505 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 SFRP5Q5T4F7 317 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 FBXO33Q7Z6M2 555 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 PDZD3Q86UT5 571 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 SULF2Q8IWU5 870 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 KCT2Q8NC54 265 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 BAHD1Q8TBE0 780 aaPredicted RBP1.86□□□□□ -2.11
HDAC9-222ENST00000474742 ELMO3Q96BJ8 720 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 GZF1Q9H116 711 aaPredicted RBP1.86□□□□□ -2.11
HDAC9-222ENST00000474742 TMEM39AQ9NV64 488 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 MAPK8IP1Q9UQF2 711 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 AKAP2Q9Y2D5 859 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 SAMM50Q9Y512 469 aa1.86□□□□□ -2.11
HDAC9-222ENST00000474742 DNAJC25-GNG10A0A024R161 153 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 A0A0G2JLL6 359 aaPredicted RBP1.85□□□□□ -2.11
HDAC9-222ENST00000474742 DCDC2CA8MYV0 355 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 ENC1O14682 589 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 FBXO24O75426 580 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 CTSHP09668 335 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 BMP6P22004 513 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 CYP7A1P22680 504 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 DLG4P78352 724 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 ZC3H12AQ5D1E8 599 aaKnown RBP1.85□□□□□ -2.11
HDAC9-222ENST00000474742 ZNF746Q6NUN9 644 aaPredicted RBP1.85□□□□□ -2.11
HDAC9-222ENST00000474742 ARMCX6Q7L4S7 300 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 THAP5Q7Z6K1 395 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 C12orf40Q86WS4 652 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 CREG2Q8IUH2 290 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 ZDHHC14Q8IZN3 488 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 OXR1Q8N573 874 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 ZNF507Q8TCN5 953 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 GRIN3AQ8TCU5 1115 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 GPBAR1Q8TDU6 330 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 FAM161BQ96MY7 647 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 MIPEPQ99797 713 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 SLC6A17Q9H1V8 727 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 SEMA3GQ9NS98 782 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 NLRP2Q9NX02 1062 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 CACNA2D2Q9NY47 1150 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 PCDHA4Q9UN74 947 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 KCTD3Q9Y597 815 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 PCDHGC5Q9Y5F6 944 aa1.85□□□□□ -2.11
HDAC9-222ENST00000474742 PRAMEF27A3QJZ7 478 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 PRR33A8MZF0 331 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 FANCGO15287 622 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 SEMA7AO75326 666 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 LRIG2O94898 1065 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 EOMESO95936 686 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 LDHBP07195 334 aaKnown RBP1.84□□□□□ -2.11
HDAC9-222ENST00000474742 ADRB1P08588 477 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 CELA3AP09093 270 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 NME2P22392 152 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 LTKP29376 864 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 TRHRP34981 398 aaPredicted RBP1.84□□□□□ -2.11
HDAC9-222ENST00000474742 ERVFC1P60507 584 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 ETF1P62495 437 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms