RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 SUPT20HL1Q3ZLR7 823 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 NBPF12Q5TAG4 269 aaPredicted RBP9.83□□□□□ -0.84
CNN3-205ENST00000474409 MIGA2Q7L4E1 593 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 CHST3Q7LGC8 479 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 USP48Q86UV5 1035 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 IQCA1Q86XH1 822 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 FOXP4Q8IVH2 680 aaPredicted RBP9.83□□□□□ -0.84
CNN3-205ENST00000474409 ZNF444Q8N0Y2 327 aaPredicted RBP9.83□□□□□ -0.84
CNN3-205ENST00000474409 CDCA5Q96FF9 252 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 TCEANC2Q96MN5 208 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 KIF2CQ99661 725 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 UBAC1Q9BSL1 405 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 INCENPQ9NQS7 918 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 PDRG1Q9NUG6 133 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 TACC3Q9Y6A5 838 aa9.83□□□□□ -0.84
CNN3-205ENST00000474409 WDR19Q8NEZ3 1342 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 TBC1D12O60347 775 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 GDF11O95390 407 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 FGRP09769 529 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 RASA1P20936 1047 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 CERKLQ49MI3 558 aaPredicted RBP9.82□□□□□ -0.84
CNN3-205ENST00000474409 FAM47AQ5JRC9 791 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 PRAMEF18Q5VWM3 479 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
CNN3-205ENST00000474409 NOL8Q76FK4 1167 aaKnown RBP9.82□□□□□ -0.84
CNN3-205ENST00000474409 CDC37L1Q7L3B6 337 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 DHX32Q7L7V1 743 aaKnown RBP9.82□□□□□ -0.84
CNN3-205ENST00000474409 ZNF341Q9BYN7 854 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 LRRC2Q9BYS8 371 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 GLIS2Q9BZE0 524 aaPredicted RBP9.82□□□□□ -0.84
CNN3-205ENST00000474409 ZSWIM6Q9HCJ5 1215 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 PGAP2Q9UHJ9 254 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 TNKSO95271 1327 aa9.82□□□□□ -0.84
CNN3-205ENST00000474409 IFIT3O14879 490 aaKnown RBP9.81□□□□□ -0.84
CNN3-205ENST00000474409 SLURP2P0DP57 97 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 AKR1B1P15121 316 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 YY1P25490 414 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 ANTXR2P58335 489 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 TFAP4Q01664 338 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 PRKG1Q13976 671 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 TTLL12Q14166 644 aaPredicted RBP9.81□□□□□ -0.84
CNN3-205ENST00000474409 WTAPQ15007 396 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 ABCB5Q2M3G0 1257 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 TATDN1Q6P1N9 297 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 Q6ZUG5 572 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 CYB5R4Q7L1T6 521 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 METTL16Q86W50 562 aaKnown RBP9.81□□□□□ -0.84
CNN3-205ENST00000474409 HSCBQ8IWL3 235 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 TMEM87BQ96K49 555 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 CCDC17Q96LX7 622 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 ZKSCAN3Q9BRR0 538 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 ZNF408Q9H9D4 720 aa9.81□□□□□ -0.84
CNN3-205ENST00000474409 RLFQ13129 1914 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 SH2B2O14492 632 aaPredicted RBP9.8□□□□□ -0.84
CNN3-205ENST00000474409 PPP1R12BO60237 982 aaPredicted RBP9.8□□□□□ -0.84
CNN3-205ENST00000474409 COL9A3Q14050 684 aaPredicted RBP9.8□□□□□ -0.84
CNN3-205ENST00000474409 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 CCDC178Q5BJE1 867 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 TMEM67Q5HYA8 995 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 CHADLQ6NUI6 762 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 TMEM179Q6ZVK1 233 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 IL27Q8NEV9 243 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 NKX2-3Q8TAU0 364 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 WRNIP1Q96S55 665 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 ZSCAN10Q96SZ4 725 aaPredicted RBP9.8□□□□□ -0.84
CNN3-205ENST00000474409 MTA3Q9BTC8 594 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 CABP5Q9NP86 173 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 ZSWIM5Q9P217 1185 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 ZBTB21Q9ULJ3 1066 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 NAP1L2Q9ULW6 460 aaPredicted RBP9.8□□□□□ -0.84
CNN3-205ENST00000474409 ANGEL1Q9UNK9 670 aaKnown RBP9.8□□□□□ -0.84
CNN3-205ENST00000474409 RBM19Q9Y4C8 960 aaKnown RBP9.8□□□□□ -0.84
CNN3-205ENST00000474409 SMCHD1A6NHR9 2005 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 TCHHQ07283 1943 aa9.8□□□□□ -0.84
CNN3-205ENST00000474409 A0A0G2JMZ2 1700 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 CCDC69A6NI79 296 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 TRAF5O00463 557 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 NMT2O60551 498 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 GH2P01242 217 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 IREB2P48200 963 aaKnown RBP9.79□□□□□ -0.84
CNN3-205ENST00000474409 MCM2P49736 904 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 AK2P54819 239 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 EXOSC10Q01780 885 aaKnown RBP9.79□□□□□ -0.84
CNN3-205ENST00000474409 ATP2B2Q01814 1243 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 ICA1Q05084 483 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 RAB3GAP1Q15042 981 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 IFIT1BQ5T764 474 aaKnown RBP9.79□□□□□ -0.84
CNN3-205ENST00000474409 DLK2Q6UY11 383 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 NFXL1Q6ZNB6 911 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 NEDD1Q8NHV4 660 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 BRF1Q92994 677 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 TTC14Q96N46 770 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 STX8Q9UNK0 236 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 FZD1Q9UP38 647 aa9.79□□□□□ -0.84
CNN3-205ENST00000474409 ASNSP08243 561 aa9.78□□□□□ -0.84
CNN3-205ENST00000474409 CAP2P40123 477 aa9.78□□□□□ -0.84
CNN3-205ENST00000474409 TOB2Q14106 344 aaPredicted RBP9.78□□□□□ -0.84
CNN3-205ENST00000474409 BECN1Q14457 450 aa9.78□□□□□ -0.84
CNN3-205ENST00000474409 SHROOM1Q2M3G4 852 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms