RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SLFN14P0C7P3 912 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 HOXA5P20719 270 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 TAGLNQ01995 201 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 LLGL2Q6P1M3 1020 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 HS2ST1Q7LGA3 356 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 AMIGO3Q86WK7 504 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 FBXO15Q8NCQ5 510 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 KIRREL1Q96J84 757 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 C20orf173Q96LM9 149 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 DUSP23Q9BVJ7 150 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 NSUN3Q9H649 340 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-213ENST00000474240 SCAMP3O14828 347 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 AFMP43652 599 aa5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 PCNX4Q63HM2 1172 aa5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 CIAPIN1Q6FI81 312 aa5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 CCDC84Q86UT8 332 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 SMYD4Q8IYR2 804 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 TOP6BLQ8N6T0 577 aa5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 MRRFQ96E11 262 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 WDR89Q96FK6 387 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 FANCD2OSQ96PS1 177 aa5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 TNKS2Q9H2K2 1166 aa5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 KCNK12Q9HB15 430 aa5.51□□□□□ -1.53
ECHDC1-213ENST00000474240 HCLS1P14317 486 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 LIG1P18858 919 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 ZNF252P-AS1Q0IIN9 211 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 KCNA10Q16322 511 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 KIF4BQ2VIQ3 1234 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 MEI1Q5TIA1 1274 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 TTBK2Q6IQ55 1244 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 PDZD3Q86UT5 571 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 RELL1Q8IUW5 271 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 TMEM87AQ8NBN3 555 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 RSRP1Q9BUV0 290 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 ATXN3LQ9H3M9 355 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 CBX8Q9HC52 389 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 CD320Q9NPF0 282 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 RNF19AQ9NV58 838 aa5.5□□□□□ -1.53
ECHDC1-213ENST00000474240 RNGTTO60942 597 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 FBXO24O75426 580 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 CELA3AP09093 270 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 ZNF76P36508 570 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 LIG3P49916 1009 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 ZNF157P51786 506 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 TSNAXIP1Q2TAA8 658 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 TMEM67Q5HYA8 995 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 AGMOQ6ZNB7 445 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 ATG14Q6ZNE5 492 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 ASB11Q8WXH4 323 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 KCNB2Q92953 911 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 ACSBG1Q96GR2 724 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 CACNA2D2Q9NY47 1150 aa5.49□□□□□ -1.53
ECHDC1-213ENST00000474240 RECKO95980 971 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 TMEM253P0C7T8 217 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 BMP6P22004 513 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 ID3Q02535 119 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 TTLL4Q14679 1199 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 MAP1SQ66K74 1059 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 CYFIP1Q7L576 1253 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 SPACA3Q8IXA5 215 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 RELTQ969Z4 430 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 BACH2Q9BYV9 841 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 ZC3H12CQ9C0D7 883 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 MIR1-1HGQ9H1L0 117 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 SNX11Q9Y5W9 270 aa5.48□□□□□ -1.53
ECHDC1-213ENST00000474240 TCAF2A6NFQ2 919 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 E9PSI1 815 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 NUAK1O60285 661 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 LMNB2Q03252 620 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 ERMP1Q7Z2K6 904 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 RNF34Q969K3 372 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 HEXIM2Q96MH2 286 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 TMEM74Q96NL1 305 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 CCDC86Q9H6F5 360 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 DISC1Q9NRI5 854 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 GGT7Q9UJ14 662 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 TACC3Q9Y6A5 838 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 PITPNM2Q9BZ72 1349 aa5.47□□□□□ -1.53
ECHDC1-213ENST00000474240 PAGE1O75459 146 aa5.46□□□□□ -1.54
ECHDC1-213ENST00000474240 ERVK-24P63145 666 aa5.46□□□□□ -1.54
ECHDC1-213ENST00000474240 FANCCQ00597 558 aa5.46□□□□□ -1.54
ECHDC1-213ENST00000474240 PHC3Q8NDX5 983 aa5.46□□□□□ -1.54
ECHDC1-213ENST00000474240 EPB41L4BQ9H329 900 aa5.46□□□□□ -1.54
ECHDC1-213ENST00000474240 C19orf73Q9NVV2 129 aa5.46□□□□□ -1.54
ECHDC1-213ENST00000474240 SNCAIPQ9Y6H5 919 aa5.46□□□□□ -1.54
ECHDC1-213ENST00000474240 ROBO2Q9HCK4 1378 aa5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 BPNT1O95861 308 aa5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 NEFMP07197 916 aa5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 GBP2P32456 591 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 RBM25P49756 843 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 LINC00310P59036 64 aa5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 HDXQ7Z353 690 aa5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 KCT2Q8NC54 265 aa5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 GPBAR1Q8TDU6 330 aa5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 RHOVQ96L33 236 aa5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 CARS2Q9HA77 564 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 DCP1AQ9NPI6 582 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 PCDHGC5Q9Y5F6 944 aa5.45□□□□□ -1.54
ECHDC1-213ENST00000474240 A0A0G2JLL6 359 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms