RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 NRLP54845 237 aa7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 NAA30Q147X3 362 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 KRT24Q2M2I5 525 aa7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 L1TD1Q5T7N2 865 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 MEIS3Q99687 375 aa7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 LPIN3Q9BQK8 851 aa7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 LRRCC1Q9C099 1032 aa7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 MIS18AQ9NYP9 233 aa7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 RGPD8O14715 1765 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 RGS12O14924 1447 aa7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 SETD1BQ9UPS6 1966 aaKnown RBP7.17□□□□□ -1.26
ATPAF1-204ENST00000474020 NWD1Q149M9 1564 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 RAB11FIP3O75154 756 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 FRAT2O75474 233 aaPredicted RBP7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 DDX58O95786 925 aaKnown RBP7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 ATP2B4P23634 1241 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 GATA4P43694 442 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 FAM26DQ5JW98 314 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 SIRT2Q8IXJ6 389 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 C19orf44Q9H6X5 657 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 FAM13BQ9NYF5 915 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 TLR7Q9NYK1 1049 aaKnown RBP7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 AOX1Q06278 1338 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 ATP10DQ9P241 1426 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 NFAT5O94916 1531 aa7.16□□□□□ -1.26
ATPAF1-204ENST00000474020 A0A0A0MRY4 1105 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 ERC2O15083 957 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 GCP02774 474 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 RAC1P63000 192 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 ATP8B2P98198 1209 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 PERM1Q5SV97 790 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 ELMSAN1Q6PJG2 1045 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 KRT28Q7Z3Y7 464 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 USHBP1Q8N6Y0 703 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 ANKRD24Q8TF21 1146 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 RAPGEF4Q8WZA2 1011 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 TTC9Q92623 222 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 GPATCH3Q96I76 525 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 BCL11AQ9H165 835 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 STIM2Q9P246 746 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 DBF4Q9UBU7 674 aaPredicted RBP7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 SPG7Q9UQ90 795 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 CEMIPQ8WUJ3 1361 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 PLEKHG2Q9H7P9 1386 aa7.15□□□□□ -1.26
ATPAF1-204ENST00000474020 DCCP43146 1447 aa7.15□□□□□ -1.27
ATPAF1-204ENST00000474020 NCOA3Q9Y6Q9 1424 aa7.15□□□□□ -1.27
ATPAF1-204ENST00000474020 PHRF1Q9P1Y6 1649 aaKnown RBP7.15□□□□□ -1.27
ATPAF1-204ENST00000474020 F6X3S4 739 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 SLIT3O75094 1523 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 LTN1O94822 1766 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 PSAPP07602 524 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 FURINP09958 794 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 HOXD8P13378 290 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 ELNP15502 786 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 EIF2S2P20042 333 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 SOX18P35713 384 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 ZAP70P43403 619 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 MCM2P49736 904 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 MLLT1Q03111 559 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 PLAURQ03405 335 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 OS9Q13438 667 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 TRIP4Q15650 581 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 GRIK4Q16099 956 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 GRIK5Q16478 980 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 SKOR2Q2VWA4 1001 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 NBPF6Q5VWK0 638 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 ARHGEF25Q86VW2 580 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 ERC1Q8IUD2 1116 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 IL17REQ8NFR9 667 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 PIK3R5Q8WYR1 880 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 NBPF4Q96M43 638 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 ANTXR1Q9H6X2 564 aa7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 FAM208AQ9UK61 1670 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-204ENST00000474020 C1orf167Q5SNV9 1468 aa7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 NPHP3Q7Z494 1330 aa7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 RNMTO43148 476 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 MMP20O60882 483 aa7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 ALDH1L1O75891 902 aa7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 MX1P20591 662 aa7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 EIF4A1P60842 406 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 MSL1Q68DK7 614 aa7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 G2E3Q7L622 706 aa7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 DNAAF4Q8WXU2 420 aa7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 HYPKQ9NX55 129 aa7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 LRRFIP2Q9Y608 721 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-204ENST00000474020 MST1RQ04912 1400 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 IBTKQ9P2D0 1353 aaPredicted RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 CACNA1FO60840 1977 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 LOC102724428A0A0B4J2F2 783 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 C9orf172C9J069 976 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 UBAP1LF5GYI3 381 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 EPB41L2O43491 1005 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 GSPT1P15170 499 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 EIF2AK2P19525 551 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 SDSP20132 328 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 PDE1AP54750 535 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 SIK1P57059 783 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 NUCB2P80303 420 aa7.12□□□□□ -1.27
ATPAF1-204ENST00000474020 NEXNQ0ZGT2 675 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms