RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 ABCF2Q9UG63 623 aa20.17■□□□□ 0.82
HPS4-210ENST00000473782 ATAD5Q96QE3 1844 aa20.17■□□□□ 0.82
HPS4-210ENST00000473782 PDS5AQ29RF7 1337 aaKnown RBP20.17■□□□□ 0.82
HPS4-210ENST00000473782 CNMDO75829 334 aa20.16■□□□□ 0.82
HPS4-210ENST00000473782 PLEKHH3Q7Z736 793 aa20.16■□□□□ 0.82
HPS4-210ENST00000473782 USP38Q8NB14 1042 aa20.16■□□□□ 0.82
HPS4-210ENST00000473782 TRPV1Q8NER1 839 aa20.16■□□□□ 0.82
HPS4-210ENST00000473782 SYMPKQ92797 1274 aaKnown RBP20.16■□□□□ 0.82
HPS4-210ENST00000473782 FBXO3Q9UK99 471 aa20.16■□□□□ 0.82
HPS4-210ENST00000473782 PDE3AQ14432 1141 aa20.15■□□□□ 0.82
HPS4-210ENST00000473782 SLF2Q8IX21 1173 aa20.15■□□□□ 0.82
HPS4-210ENST00000473782 LPAR1Q92633 364 aa20.15■□□□□ 0.82
HPS4-210ENST00000473782 DNAJC18Q9H819 358 aa20.15■□□□□ 0.82
HPS4-210ENST00000473782 DDX20Q9UHI6 824 aaKnown RBP20.15■□□□□ 0.82
HPS4-210ENST00000473782 SIPA1L1O43166 1804 aa20.14■□□□□ 0.81
HPS4-210ENST00000473782 FOSL2P15408 326 aa20.14■□□□□ 0.81
HPS4-210ENST00000473782 TIMM10P62072 90 aa20.14■□□□□ 0.81
HPS4-210ENST00000473782 MAP2K5Q13163 448 aa20.14■□□□□ 0.81
HPS4-210ENST00000473782 BADQ92934 168 aa20.14■□□□□ 0.81
HPS4-210ENST00000473782 AS3MTQ9HBK9 375 aa20.14■□□□□ 0.81
HPS4-210ENST00000473782 DNM1LO00429 736 aa20.13■□□□□ 0.81
HPS4-210ENST00000473782 NSUN4Q96CB9 384 aaKnown RBP20.13■□□□□ 0.81
HPS4-210ENST00000473782 EDC3Q96F86 508 aaKnown RBP20.13■□□□□ 0.81
HPS4-210ENST00000473782 EMILIN3Q9NT22 766 aa20.13■□□□□ 0.81
HPS4-210ENST00000473782 HERC5Q9UII4 1024 aaKnown RBP20.13■□□□□ 0.81
HPS4-210ENST00000473782 PA2G4Q9UQ80 394 aaKnown RBP20.13■□□□□ 0.81
HPS4-210ENST00000473782 TRIM43BA6NCK2 446 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 TNFRSF10AO00220 468 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 TJAP1Q5JTD0 557 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 SLC39A5Q6ZMH5 540 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 SH3RF1Q7Z6J0 888 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 METTL16Q86W50 562 aaKnown RBP20.12■□□□□ 0.81
HPS4-210ENST00000473782 NPLOC4Q8TAT6 608 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 TRIM43Q96BQ3 446 aaPredicted RBP20.12■□□□□ 0.81
HPS4-210ENST00000473782 PAGR1Q9BTK6 254 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 TMOD4Q9NZQ9 345 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 ATP11BQ9Y2G3 1177 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 NDUFB9Q9Y6M9 179 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.12■□□□□ 0.81
HPS4-210ENST00000473782 RLFQ13129 1914 aa20.12■□□□□ 0.81
HPS4-210ENST00000473782 C19orf81C9J6K1 198 aa20.11■□□□□ 0.81
HPS4-210ENST00000473782 ITGB8P26012 769 aa20.11■□□□□ 0.81
HPS4-210ENST00000473782 SNX17Q15036 470 aa20.11■□□□□ 0.81
HPS4-210ENST00000473782 SPTY2D1Q68D10 685 aaPredicted RBP20.11■□□□□ 0.81
HPS4-210ENST00000473782 ERICH6Q7L0X2 663 aa20.11■□□□□ 0.81
HPS4-210ENST00000473782 USP17L10C9JJH3 530 aa20.1■□□□□ 0.81
HPS4-210ENST00000473782 MAP4K4O95819 1239 aaPredicted RBP20.1■□□□□ 0.81
HPS4-210ENST00000473782 HOXC6P09630 235 aa20.1■□□□□ 0.81
HPS4-210ENST00000473782 IL15P40933 162 aaPredicted RBP20.1■□□□□ 0.81
HPS4-210ENST00000473782 EPHB4P54760 987 aa20.1■□□□□ 0.81
HPS4-210ENST00000473782 GRIN2CQ14957 1233 aa20.1■□□□□ 0.81
HPS4-210ENST00000473782 GJC2Q5T442 439 aaPredicted RBP20.1■□□□□ 0.81
HPS4-210ENST00000473782 PDLIM7Q9NR12 457 aa20.1■□□□□ 0.81
HPS4-210ENST00000473782 PRKAG2Q9UGJ0 569 aa20.1■□□□□ 0.81
HPS4-210ENST00000473782 PTPRCP08575 1304 aa20.09■□□□□ 0.81
HPS4-210ENST00000473782 ASNSP08243 561 aa20.09■□□□□ 0.81
HPS4-210ENST00000473782 PTPREP23469 700 aa20.09■□□□□ 0.81
HPS4-210ENST00000473782 CYP2C19P33261 490 aa20.09■□□□□ 0.81
HPS4-210ENST00000473782 MFSD14CQ5VZR4 134 aa20.09■□□□□ 0.81
HPS4-210ENST00000473782 PI16Q6UXB8 463 aa20.09■□□□□ 0.81
HPS4-210ENST00000473782 TBC1D9Q6ZT07 1266 aa20.09■□□□□ 0.81
HPS4-210ENST00000473782 PI4KBQ9UBF8 816 aa20.09■□□□□ 0.81
HPS4-210ENST00000473782 MSCO60682 206 aa20.08■□□□□ 0.81
HPS4-210ENST00000473782 CYBAP13498 195 aa20.08■□□□□ 0.81
HPS4-210ENST00000473782 TRIM60Q495X7 471 aa20.08■□□□□ 0.81
HPS4-210ENST00000473782 SH3RF3Q8TEJ3 882 aaPredicted RBP20.08■□□□□ 0.81
HPS4-210ENST00000473782 GTF3C2Q8WUA4 911 aaPredicted RBP20.08■□□□□ 0.81
HPS4-210ENST00000473782 XAGE2Q96GT9 111 aa20.08■□□□□ 0.81
HPS4-210ENST00000473782 HMG20BQ9P0W2 317 aa20.08■□□□□ 0.81
HPS4-210ENST00000473782 RABGAP1Q9Y3P9 1069 aa20.08■□□□□ 0.81
HPS4-210ENST00000473782 TMEM265A0A087WTH1 108 aa20.07■□□□□ 0.8
HPS4-210ENST00000473782 SLC15A5A6NIM6 579 aa20.07■□□□□ 0.8
HPS4-210ENST00000473782 CNGA1P29973 690 aa20.07■□□□□ 0.8
HPS4-210ENST00000473782 GRB14Q14449 540 aa20.07■□□□□ 0.8
HPS4-210ENST00000473782 COPRSQ9NQ92 184 aa20.07■□□□□ 0.8
HPS4-210ENST00000473782 PRDM5Q9NQX1 630 aaPredicted RBP20.07■□□□□ 0.8
HPS4-210ENST00000473782 GDF11O95390 407 aa20.06■□□□□ 0.8
HPS4-210ENST00000473782 PLA2G5P39877 138 aa20.06■□□□□ 0.8
HPS4-210ENST00000473782 CCAR1Q8IX12 1150 aaKnown RBP20.06■□□□□ 0.8
HPS4-210ENST00000473782 TEX11Q8IYF3 940 aa20.06■□□□□ 0.8
HPS4-210ENST00000473782 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
HPS4-210ENST00000473782 BTBD7Q9P203 1132 aa20.06■□□□□ 0.8
HPS4-210ENST00000473782 ZBTB21Q9ULJ3 1066 aa20.06■□□□□ 0.8
HPS4-210ENST00000473782 BDP1A6H8Y1 2624 aa20.05■□□□□ 0.8
HPS4-210ENST00000473782 A0A1B0GUL7 405 aa20.05■□□□□ 0.8
HPS4-210ENST00000473782 C12orf42Q96LP6 360 aa20.05■□□□□ 0.8
HPS4-210ENST00000473782 CHD9Q3L8U1 2897 aa20.04■□□□□ 0.8
HPS4-210ENST00000473782 LDHCP07864 332 aa20.04■□□□□ 0.8
HPS4-210ENST00000473782 ATP2B2Q01814 1243 aa20.04■□□□□ 0.8
HPS4-210ENST00000473782 C1orf53Q5VUE5 145 aa20.04■□□□□ 0.8
HPS4-210ENST00000473782 ANO1Q5XXA6 986 aa20.04■□□□□ 0.8
HPS4-210ENST00000473782 USP17L2Q6R6M4 530 aa20.04■□□□□ 0.8
HPS4-210ENST00000473782 DHX36Q9H2U1 1008 aaKnown RBP20.04■□□□□ 0.8
HPS4-210ENST00000473782 GSTO1P78417 241 aa20.03■□□□□ 0.8
HPS4-210ENST00000473782 CATSPERGQ6ZRH7 1159 aa20.03■□□□□ 0.8
HPS4-210ENST00000473782 FOXP4Q8IVH2 680 aaPredicted RBP20.03■□□□□ 0.8
HPS4-210ENST00000473782 SPATA5Q8NB90 893 aa20.03■□□□□ 0.8
HPS4-210ENST00000473782 GINM1Q9NU53 330 aa20.03■□□□□ 0.8
HPS4-210ENST00000473782 NCOR1O75376 2440 aa20.03■□□□□ 0.8
HPS4-210ENST00000473782 ZNF521Q96K83 1311 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms