RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 PALD1Q9ULE6 856 aa21.85■■□□□ 1.09
SNX4-204ENST00000473417 USP17L5A8MUK1 530 aa21.84■■□□□ 1.09
SNX4-204ENST00000473417 ECM2O94769 699 aaPredicted RBP21.84■■□□□ 1.09
SNX4-204ENST00000473417 OSBPP22059 807 aa21.84■■□□□ 1.09
SNX4-204ENST00000473417 SPP2Q13103 211 aa21.84■■□□□ 1.09
SNX4-204ENST00000473417 MIGA1Q8NAN2 632 aa21.84■■□□□ 1.09
SNX4-204ENST00000473417 SRRDQ9UH36 339 aa21.84■■□□□ 1.09
SNX4-204ENST00000473417 TREML2Q5T2D2 321 aa21.83■■□□□ 1.09
SNX4-204ENST00000473417 FOXP4Q8IVH2 680 aaPredicted RBP21.83■■□□□ 1.09
SNX4-204ENST00000473417 SAP30BPQ9UHR5 308 aaKnown RBP21.83■■□□□ 1.09
SNX4-204ENST00000473417 TTC41PQ6P2S7 1318 aa21.82■■□□□ 1.08
SNX4-204ENST00000473417 FMNL1O95466 1100 aaPredicted RBP21.82■■□□□ 1.08
SNX4-204ENST00000473417 ASNSP08243 561 aa21.82■■□□□ 1.08
SNX4-204ENST00000473417 MX1P20591 662 aa21.82■■□□□ 1.08
SNX4-204ENST00000473417 CRACR2BQ8N4Y2 399 aaPredicted RBP21.82■■□□□ 1.08
SNX4-204ENST00000473417 SH3TC2Q8TF17 1288 aa21.82■■□□□ 1.08
SNX4-204ENST00000473417 AS3MTQ9HBK9 375 aa21.82■■□□□ 1.08
SNX4-204ENST00000473417 BAZ2AQ9UIF9 1905 aaKnown RBP21.82■■□□□ 1.08
SNX4-204ENST00000473417 MYPNQ86TC9 1320 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 HLA-DOAP06340 250 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 HOXD10P28358 340 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 HMGCS2P54868 508 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 FCGRTP55899 365 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 JAG1P78504 1218 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 NUCB1Q02818 461 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 SH3D19Q5HYK7 790 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 SLC9C2Q5TAH2 1124 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 CHD1LQ86WJ1 897 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 SMCR8Q8TEV9 937 aaPredicted RBP21.81■■□□□ 1.08
SNX4-204ENST00000473417 RIOK1Q9BRS2 568 aaKnown RBP21.81■■□□□ 1.08
SNX4-204ENST00000473417 WDR18Q9BV38 432 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 TMEM106CQ9BVX2 250 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 PNMA3Q9UL41 463 aa21.81■■□□□ 1.08
SNX4-204ENST00000473417 PLXNB2O15031 1838 aa21.8■■□□□ 1.08
SNX4-204ENST00000473417 ERC2O15083 957 aa21.8■■□□□ 1.08
SNX4-204ENST00000473417 USP5P45974 858 aa21.8■■□□□ 1.08
SNX4-204ENST00000473417 TRIM34Q9BYJ4 488 aa21.8■■□□□ 1.08
SNX4-204ENST00000473417 GINM1Q9NU53 330 aa21.8■■□□□ 1.08
SNX4-204ENST00000473417 SALL3Q9BXA9 1300 aa21.8■■□□□ 1.08
SNX4-204ENST00000473417 PDE6AP16499 860 aa21.79■■□□□ 1.08
SNX4-204ENST00000473417 EN2P19622 333 aaPredicted RBP21.79■■□□□ 1.08
SNX4-204ENST00000473417 SHROOM1Q2M3G4 852 aaPredicted RBP21.79■■□□□ 1.08
SNX4-204ENST00000473417 SLC4A8Q2Y0W8 1093 aa21.79■■□□□ 1.08
SNX4-204ENST00000473417 PI4K2BQ8TCG2 481 aa21.79■■□□□ 1.08
SNX4-204ENST00000473417 ZBTB21Q9ULJ3 1066 aa21.79■■□□□ 1.08
SNX4-204ENST00000473417 GLRX3O76003 335 aaKnown RBP21.78■■□□□ 1.08
SNX4-204ENST00000473417 GDF11O95390 407 aa21.78■■□□□ 1.08
SNX4-204ENST00000473417 PRKCZQ05513 592 aa21.78■■□□□ 1.08
SNX4-204ENST00000473417 RAET1EQ8TD07 263 aa21.78■■□□□ 1.08
SNX4-204ENST00000473417 EHD4Q9H223 541 aa21.78■■□□□ 1.08
SNX4-204ENST00000473417 ZNF532Q9HCE3 1301 aa21.78■■□□□ 1.08
SNX4-204ENST00000473417 GRK4P32298 578 aa21.77■■□□□ 1.08
SNX4-204ENST00000473417 PDE1AP54750 535 aa21.77■■□□□ 1.08
SNX4-204ENST00000473417 BACE1P56817 501 aa21.77■■□□□ 1.08
SNX4-204ENST00000473417 PABPC4Q13310 644 aaKnown RBP eCLIP21.77■■□□□ 1.08
SNX4-204ENST00000473417 MTMR2Q13614 643 aa21.77■■□□□ 1.08
SNX4-204ENST00000473417 FAM110CQ1W6H9 321 aa21.77■■□□□ 1.08
SNX4-204ENST00000473417 SLFNL1Q499Z3 407 aa21.77■■□□□ 1.08
SNX4-204ENST00000473417 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.77■■□□□ 1.086e-6■■■□□ 19.2
SNX4-204ENST00000473417 MAGEB6P1A0A0J9YX57 407 aa21.76■■□□□ 1.07
SNX4-204ENST00000473417 TCRBV5S4A2TA0A5A2 114 aa21.76■■□□□ 1.07
SNX4-204ENST00000473417 CHGBP05060 677 aa21.76■■□□□ 1.07
SNX4-204ENST00000473417 NEFLP07196 543 aa21.76■■□□□ 1.07
SNX4-204ENST00000473417 TATDN1Q6P1N9 297 aa21.76■■□□□ 1.07
SNX4-204ENST00000473417 ANKRD13CQ8N6S4 541 aa21.76■■□□□ 1.07
SNX4-204ENST00000473417 STAP2Q9UGK3 403 aa21.76■■□□□ 1.07
SNX4-204ENST00000473417 SERPINB13Q9UIV8 391 aa21.76■■□□□ 1.07
SNX4-204ENST00000473417 GABRQQ9UN88 632 aa21.76■■□□□ 1.07
SNX4-204ENST00000473417 MYCP01106 439 aaPredicted RBP21.75■■□□□ 1.07
SNX4-204ENST00000473417 ADD2P35612 726 aa21.75■■□□□ 1.07
SNX4-204ENST00000473417 GCLCP48506 637 aaPredicted RBP21.75■■□□□ 1.07
SNX4-204ENST00000473417 TTC6Q86TZ1 520 aa21.75■■□□□ 1.07
SNX4-204ENST00000473417 ASCC2Q9H1I8 757 aaPredicted RBP21.75■■□□□ 1.07
SNX4-204ENST00000473417 C19orf81C9J6K1 198 aa21.74■■□□□ 1.07
SNX4-204ENST00000473417 USP17L10C9JJH3 530 aa21.74■■□□□ 1.07
SNX4-204ENST00000473417 TNPO2O14787 897 aaKnown RBP21.74■■□□□ 1.07
SNX4-204ENST00000473417 KBTBD3Q8NAB2 608 aa21.74■■□□□ 1.07
SNX4-204ENST00000473417 CRNKL1Q9BZJ0 848 aaKnown RBP21.74■■□□□ 1.07
SNX4-204ENST00000473417 HOXA7P31268 230 aaPredicted RBP21.73■■□□□ 1.07
SNX4-204ENST00000473417 MTFR1Q15390 333 aa21.73■■□□□ 1.07
SNX4-204ENST00000473417 ZSCAN25Q6NSZ9 544 aa21.73■■□□□ 1.07
SNX4-204ENST00000473417 SLAIN1Q8ND83 568 aa21.73■■□□□ 1.07
SNX4-204ENST00000473417 TMOD4Q9NZQ9 345 aa21.73■■□□□ 1.07
SNX4-204ENST00000473417 GH2P01242 217 aa21.72■■□□□ 1.07
SNX4-204ENST00000473417 FLT3LGP49771 235 aa21.72■■□□□ 1.07
SNX4-204ENST00000473417 PLCD1P51178 756 aa21.72■■□□□ 1.07
SNX4-204ENST00000473417 IRF5Q13568 498 aa21.72■■□□□ 1.07
SNX4-204ENST00000473417 UBE3CQ15386 1083 aa21.72■■□□□ 1.07
SNX4-204ENST00000473417 PLEKHM2Q8IWE5 1019 aa21.72■■□□□ 1.07
SNX4-204ENST00000473417 LCORLQ8N3X6 602 aa21.72■■□□□ 1.07
SNX4-204ENST00000473417 MORF4L1Q9UBU8 362 aa21.71■■□□□ 1.07
SNX4-204ENST00000473417 PARP14Q460N5 1801 aa21.71■■□□□ 1.07
SNX4-204ENST00000473417 ADCY3O60266 1144 aa21.7■■□□□ 1.06
SNX4-204ENST00000473417 SHMT1P34896 483 aa21.7■■□□□ 1.06
SNX4-204ENST00000473417 IRX3P78415 501 aaPredicted RBP21.7■■□□□ 1.06
SNX4-204ENST00000473417 GABPAQ06546 454 aa21.7■■□□□ 1.06
SNX4-204ENST00000473417 SDR42E1Q8WUS8 393 aa21.7■■□□□ 1.06
SNX4-204ENST00000473417 COA7Q96BR5 231 aa21.7■■□□□ 1.06
SNX4-204ENST00000473417 SHISA4Q96DD7 197 aa21.7■■□□□ 1.06
SNX4-204ENST00000473417 FSD1Q9BTV5 496 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms