RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 AAMPQ13685 434 aa27.21■■□□□ 1.95
PTP4A1-203ENST00000473334 SHROOM1Q2M3G4 852 aaPredicted RBP27.21■■□□□ 1.95
PTP4A1-203ENST00000473334 SH3D19Q5HYK7 790 aa27.21■■□□□ 1.95
PTP4A1-203ENST00000473334 ARHGAP39Q9C0H5 1083 aa27.21■■□□□ 1.95
PTP4A1-203ENST00000473334 DCP1AQ9NPI6 582 aaPredicted RBP27.21■■□□□ 1.95
PTP4A1-203ENST00000473334 MCM9Q9NXL9 1143 aa27.21■■□□□ 1.95
PTP4A1-203ENST00000473334 TTC41PQ6P2S7 1318 aa27.2■■□□□ 1.95
PTP4A1-203ENST00000473334 CHGBP05060 677 aa27.2■■□□□ 1.94
PTP4A1-203ENST00000473334 TREML2Q5T2D2 321 aa27.2■■□□□ 1.94
PTP4A1-203ENST00000473334 GNRH1P01148 92 aa27.19■■□□□ 1.94
PTP4A1-203ENST00000473334 BCRP11274 1271 aa27.19■■□□□ 1.94
PTP4A1-203ENST00000473334 HDAC1Q13547 482 aaPredicted RBP27.19■■□□□ 1.94
PTP4A1-203ENST00000473334 KBTBD3Q8NAB2 608 aa27.19■■□□□ 1.94
PTP4A1-203ENST00000473334 PNMA3Q9UL41 463 aa27.19■■□□□ 1.94
PTP4A1-203ENST00000473334 BACE1P56817 501 aa27.18■■□□□ 1.94
PTP4A1-203ENST00000473334 MTMR2Q13614 643 aa27.18■■□□□ 1.94
PTP4A1-203ENST00000473334 SMCR8Q8TEV9 937 aaPredicted RBP27.18■■□□□ 1.94
PTP4A1-203ENST00000473334 ATP8A2Q9NTI2 1148 aa27.18■■□□□ 1.94
PTP4A1-203ENST00000473334 BAZ2AQ9UIF9 1905 aaKnown RBP27.18■■□□□ 1.94
PTP4A1-203ENST00000473334 ERC2O15083 957 aa27.17■■□□□ 1.94
PTP4A1-203ENST00000473334 GH2P01242 217 aa27.17■■□□□ 1.94
PTP4A1-203ENST00000473334 GABPAQ06546 454 aa27.17■■□□□ 1.94
PTP4A1-203ENST00000473334 PABPC4Q13310 644 aaKnown RBP eCLIP27.17■■□□□ 1.94
PTP4A1-203ENST00000473334 CERKLQ49MI3 558 aaPredicted RBP27.17■■□□□ 1.94
PTP4A1-203ENST00000473334 GCC1Q96CN9 775 aa27.17■■□□□ 1.94
PTP4A1-203ENST00000473334 ZBTB47Q9UFB7 747 aaPredicted RBP27.17■■□□□ 1.94
PTP4A1-203ENST00000473334 MGAMO43451 1857 aa27.17■■□□□ 1.94
PTP4A1-203ENST00000473334 USP17L10C9JJH3 530 aa27.16■■□□□ 1.94
PTP4A1-203ENST00000473334 PRKAB2O43741 272 aa27.16■■□□□ 1.94
PTP4A1-203ENST00000473334 SHMT1P34896 483 aa27.16■■□□□ 1.94
PTP4A1-203ENST00000473334 PSMC4P43686 418 aa27.16■■□□□ 1.94
PTP4A1-203ENST00000473334 OTUD7AQ8TE49 926 aaPredicted RBP27.16■■□□□ 1.94
PTP4A1-203ENST00000473334 PUS7LQ9H0K6 701 aaKnown RBP27.16■■□□□ 1.94
PTP4A1-203ENST00000473334 PTCH2Q9Y6C5 1203 aa27.16■■□□□ 1.94
PTP4A1-203ENST00000473334 C19orf81C9J6K1 198 aa27.15■■□□□ 1.94
PTP4A1-203ENST00000473334 CTGFP29279 349 aa27.15■■□□□ 1.94
PTP4A1-203ENST00000473334 PRMT2P55345 433 aa27.15■■□□□ 1.94
PTP4A1-203ENST00000473334 MLLT1Q03111 559 aaPredicted RBP27.15■■□□□ 1.94
PTP4A1-203ENST00000473334 PI4K2BQ8TCG2 481 aa27.15■■□□□ 1.94
PTP4A1-203ENST00000473334 TMOD4Q9NZQ9 345 aa27.15■■□□□ 1.94
PTP4A1-203ENST00000473334 MYH8P13535 1937 aa27.14■■□□□ 1.94
PTP4A1-203ENST00000473334 GLRX3O76003 335 aaKnown RBP27.14■■□□□ 1.94
PTP4A1-203ENST00000473334 ECM2O94769 699 aaPredicted RBP27.14■■□□□ 1.94
PTP4A1-203ENST00000473334 MX1P20591 662 aa27.14■■□□□ 1.94
PTP4A1-203ENST00000473334 ABCB5Q2M3G0 1257 aa27.14■■□□□ 1.94
PTP4A1-203ENST00000473334 ANKRD45Q5TZF3 282 aa27.14■■□□□ 1.94
PTP4A1-203ENST00000473334 ARMC5Q96C12 935 aa27.14■■□□□ 1.94
PTP4A1-203ENST00000473334 TRIM47Q96LD4 638 aa27.14■■□□□ 1.94
PTP4A1-203ENST00000473334 CABP5Q9NP86 173 aa27.14■■□□□ 1.94
PTP4A1-203ENST00000473334 FMNL1O95466 1100 aaPredicted RBP27.13■■□□□ 1.93
PTP4A1-203ENST00000473334 ZFYP08048 801 aaPredicted RBP27.13■■□□□ 1.93
PTP4A1-203ENST00000473334 CYP2D6P10635 497 aa27.13■■□□□ 1.93
PTP4A1-203ENST00000473334 OSBPP22059 807 aa27.13■■□□□ 1.93
PTP4A1-203ENST00000473334 EVX2Q03828 476 aa27.13■■□□□ 1.93
PTP4A1-203ENST00000473334 DDRGK1Q96HY6 314 aa27.13■■□□□ 1.93
PTP4A1-203ENST00000473334 TAOK2Q9UL54 1235 aa27.13■■□□□ 1.93
PTP4A1-203ENST00000473334 SLC4A4Q9Y6R1 1079 aa27.13■■□□□ 1.93
PTP4A1-203ENST00000473334 SALL3Q9BXA9 1300 aa27.13■■□□□ 1.93
PTP4A1-203ENST00000473334 CENPFP49454 3210 aa27.12■■□□□ 1.93
PTP4A1-203ENST00000473334 RAB3GAP1Q15042 981 aa27.12■■□□□ 1.93
PTP4A1-203ENST00000473334 AMOTL1Q8IY63 956 aa27.12■■□□□ 1.93
PTP4A1-203ENST00000473334 APPBP2Q92624 585 aa27.12■■□□□ 1.93
PTP4A1-203ENST00000473334 ASCC2Q9H1I8 757 aaPredicted RBP27.12■■□□□ 1.93
PTP4A1-203ENST00000473334 SWAP70Q9UH65 585 aa27.12■■□□□ 1.93
PTP4A1-203ENST00000473334 RNF113AO15541 343 aaKnown RBP27.11■■□□□ 1.93
PTP4A1-203ENST00000473334 HOXD10P28358 340 aa27.11■■□□□ 1.93
PTP4A1-203ENST00000473334 FCGRTP55899 365 aa27.11■■□□□ 1.93
PTP4A1-203ENST00000473334 LRRFIP1Q32MZ4 808 aaKnown RBP27.11■■□□□ 1.93
PTP4A1-203ENST00000473334 SLC9C1Q4G0N8 1177 aa27.11■■□□□ 1.93
PTP4A1-203ENST00000473334 SRRDQ9UH36 339 aa27.11■■□□□ 1.93
PTP4A1-203ENST00000473334 GCLCP48506 637 aaPredicted RBP27.1■■□□□ 1.93
PTP4A1-203ENST00000473334 FAM110CQ1W6H9 321 aa27.1■■□□□ 1.93
PTP4A1-203ENST00000473334 USP17L2Q6R6M4 530 aa27.1■■□□□ 1.93
PTP4A1-203ENST00000473334 ANKRD13CQ8N6S4 541 aa27.1■■□□□ 1.93
PTP4A1-203ENST00000473334 FEZ1Q99689 392 aa27.1■■□□□ 1.93
PTP4A1-203ENST00000473334 RBBP6Q7Z6E9 1792 aaKnown RBP27.09■■□□□ 1.93
PTP4A1-203ENST00000473334 HOXA7P31268 230 aaPredicted RBP27.09■■□□□ 1.93
PTP4A1-203ENST00000473334 IRX3P78415 501 aaPredicted RBP27.09■■□□□ 1.93
PTP4A1-203ENST00000473334 C12orf60Q5U649 245 aa27.09■■□□□ 1.93
PTP4A1-203ENST00000473334 NBPF11Q86T75 865 aa27.09■■□□□ 1.93
PTP4A1-203ENST00000473334 EXOC6Q8TAG9 804 aa27.09■■□□□ 1.93
PTP4A1-203ENST00000473334 OSBP2Q969R2 916 aa27.09■■□□□ 1.93
PTP4A1-203ENST00000473334 STRBPQ96SI9 672 aaKnown RBP27.09■■□□□ 1.93
PTP4A1-203ENST00000473334 USP17L12C9JPN9 530 aa27.08■■□□□ 1.93
PTP4A1-203ENST00000473334 USP17L21D6R901 530 aa27.08■■□□□ 1.93
PTP4A1-203ENST00000473334 SLC44A5Q8NCS7 719 aa27.08■■□□□ 1.93
PTP4A1-203ENST00000473334 DYNLL2Q96FJ2 89 aa27.08■■□□□ 1.93
PTP4A1-203ENST00000473334 C12orf42Q96LP6 360 aa27.08■■□□□ 1.93
PTP4A1-203ENST00000473334 RWDD1Q9H446 243 aaPredicted RBP27.08■■□□□ 1.93
PTP4A1-203ENST00000473334 EMILIN3Q9NT22 766 aa27.08■■□□□ 1.93
PTP4A1-203ENST00000473334 MYPNQ86TC9 1320 aa27.08■■□□□ 1.93
PTP4A1-203ENST00000473334 MPHOSPH10O00566 681 aaKnown RBP27.07■■□□□ 1.92
PTP4A1-203ENST00000473334 GUCY1A2P33402 732 aa27.07■■□□□ 1.92
PTP4A1-203ENST00000473334 ZNF333Q96JL9 665 aa27.07■■□□□ 1.92
PTP4A1-203ENST00000473334 FSD1Q9BTV5 496 aa27.07■■□□□ 1.92
PTP4A1-203ENST00000473334 KIAA1683Q9H0B3 1180 aa27.07■■□□□ 1.92
PTP4A1-203ENST00000473334 SUPT16HQ9Y5B9 1047 aaKnown RBP27.07■■□□□ 1.92
PTP4A1-203ENST00000473334 CYP2D7A0A087X1C5 515 aa27.06■■□□□ 1.92
PTP4A1-203ENST00000473334 USP14P54578 494 aa27.06■■□□□ 1.92
PTP4A1-203ENST00000473334 SEPT2Q15019 361 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms