RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 CHMP1AQ9HD42 196 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 FCHSD2O94868 740 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 ESRRGP62508 458 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 KRT17Q04695 432 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 HABP4Q5JVS0 413 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 RUBCNQ92622 972 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CHMP6Q96FZ7 201 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 DNAJC17Q9NVM6 304 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 MAP3K1Q13233 1512 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 GNAT3A8MTJ3 354 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 AACSQ86V21 672 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 ZNF483Q8TF39 744 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 HOMER2Q9NSB8 354 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 APPL1Q9UKG1 709 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 NOS1P29475 1434 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 DAB1O75553 588 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 EEF2P13639 858 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 DUSP27Q5VZP5 1158 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 STXBP4Q6ZWJ1 553 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CCHCR1Q8TD31 782 aa9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 SMCR8Q8TEV9 937 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 ARHGEF2Q92974 986 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP2-209ENST00000473282 MAGEA9P43362 315 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CKAP4Q07065 602 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 SKAP1Q86WV1 359 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 TEKT2Q9UIF3 430 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 STK38LQ9Y2H1 464 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PRDM1O75626 825 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 C20orf194Q5TEA3 1177 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 SDE2Q6IQ49 451 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 MCM10Q7L590 875 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 VTI1AQ96AJ9 217 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 HOOK2Q96ED9 719 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 SRGAP3O43295 1099 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 FLT3P36888 993 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 LAMC2Q13753 1193 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 Q4G0T1 1027 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PASD1Q8IV76 773 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 IL1RAPL2Q9NP60 686 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PARVAQ9NVD7 372 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 ZKSCAN5Q9Y2L8 839 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 WDR33Q9C0J8 1336 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 TRPA1O75762 1119 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 BRD1O95696 1058 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 HSPA1AP0DMV8 641 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 HSPA1BP0DMV9 641 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 EEF1DP29692 281 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 THUMPD2Q9BTF0 503 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 THAP12O43422 761 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CLUP10909 449 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 FBXO31Q5XUX0 539 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CWC27Q6UX04 472 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.11□□□□□ -0.952e-6■■□□□ 12.4
CDK5RAP2-209ENST00000473282 CHRAC1Q9NRG0 131 aa9.11□□□□□ -0.95
CDK5RAP2-209ENST00000473282 A0A1W2PRG0 241 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 HSPA1LP34931 641 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PRDM11Q9NQV5 511 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 MBD2Q9UBB5 411 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 ATPIF1Q9UII2 106 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 LZTS1Q9Y250 596 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 GOLGA8CPA6NN73 597 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 AP3B1O00203 1094 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CHUKO15111 745 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PHACTR2O75167 634 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 SLC3A2P08195 630 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CASTP20810 708 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 ERCC6LQ2NKX8 1250 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 BICDL1Q6ZP65 573 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 TRIM69Q86WT6 500 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PPME1Q9Y570 386 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 ADGRF5Q8IZF2 1346 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PRLP01236 227 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 MYBPC2Q14324 1141 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 NME9Q86XW9 330 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CCDC28BQ9BUN5 200 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 MRPS26Q9BYN8 205 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PDRG1Q9NUG6 133 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PARP3Q9Y6F1 533 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CDC40O60508 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 VEPH1Q14D04 833 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 EGFL6Q8IUX8 553 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 C1orf131Q8NDD1 294 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 TRIM58Q8NG06 486 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 FBXO41Q8TF61 875 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CCDC138Q96M89 665 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CARD10Q9BWT7 1032 aa9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 NKTRP30414 1462 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP2-209ENST00000473282 ENO4A6NNW6 628 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 HMGB2P26583 209 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 HOXC8P31273 242 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 GSDMDP57764 484 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 PPP1R7Q15435 360 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 CDH24Q86UP0 819 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 STK24Q9Y6E0 443 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 KIF21AQ7Z4S6 1674 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 H0Y626 953 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 GNB5O14775 395 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 TRIM16O95361 564 aa9.09□□□□□ -0.95
CDK5RAP2-209ENST00000473282 TRAF7Q6Q0C0 670 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms