RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 ZSWIM8A7E2V4 1837 aa25.14■■□□□ 1.61
EPHB3-202ENST00000473079 GDF11O95390 407 aa25.13■■□□□ 1.61
EPHB3-202ENST00000473079 GCLCP48506 637 aaPredicted RBP25.13■■□□□ 1.61
EPHB3-202ENST00000473079 TMEM106CQ9BVX2 250 aa25.13■■□□□ 1.61
EPHB3-202ENST00000473079 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.13■■□□□ 1.61
EPHB3-202ENST00000473079 LOC285556D6RIA3 1793 aa25.13■■□□□ 1.61
EPHB3-202ENST00000473079 CENPFP49454 3210 aa25.12■■□□□ 1.61
EPHB3-202ENST00000473079 USP17L10C9JJH3 530 aa25.12■■□□□ 1.61
EPHB3-202ENST00000473079 HOXA7P31268 230 aaPredicted RBP25.12■■□□□ 1.61
EPHB3-202ENST00000473079 ADD2P35612 726 aa25.12■■□□□ 1.61
EPHB3-202ENST00000473079 MTMR2Q13614 643 aa25.12■■□□□ 1.61
EPHB3-202ENST00000473079 SLC4A8Q2Y0W8 1093 aa25.12■■□□□ 1.61
EPHB3-202ENST00000473079 MYPNQ86TC9 1320 aa25.12■■□□□ 1.61
EPHB3-202ENST00000473079 RBBP6Q7Z6E9 1792 aaKnown RBP25.11■■□□□ 1.61
EPHB3-202ENST00000473079 SMARCA5O60264 1052 aaPredicted RBP25.11■■□□□ 1.61
EPHB3-202ENST00000473079 PLCD1P51178 756 aa25.11■■□□□ 1.61
EPHB3-202ENST00000473079 FAM110CQ1W6H9 321 aa25.11■■□□□ 1.61
EPHB3-202ENST00000473079 SHROOM1Q2M3G4 852 aaPredicted RBP25.11■■□□□ 1.61
EPHB3-202ENST00000473079 SH3TC2Q8TF17 1288 aa25.11■■□□□ 1.61
EPHB3-202ENST00000473079 TMOD4Q9NZQ9 345 aa25.11■■□□□ 1.61
EPHB3-202ENST00000473079 TAOK2Q9UL54 1235 aa25.11■■□□□ 1.61
EPHB3-202ENST00000473079 MYH1P12882 1939 aa25.1■■□□□ 1.61
EPHB3-202ENST00000473079 ECM2O94769 699 aaPredicted RBP25.1■■□□□ 1.61
EPHB3-202ENST00000473079 GABPAQ06546 454 aa25.1■■□□□ 1.61
EPHB3-202ENST00000473079 UBE3CQ15386 1083 aa25.1■■□□□ 1.61
EPHB3-202ENST00000473079 LCORLQ8N3X6 602 aa25.1■■□□□ 1.61
EPHB3-202ENST00000473079 RAET1EQ8TD07 263 aa25.1■■□□□ 1.61
EPHB3-202ENST00000473079 ASCC2Q9H1I8 757 aaPredicted RBP25.1■■□□□ 1.61
EPHB3-202ENST00000473079 ECHDC1Q9NTX5 307 aa25.1■■□□□ 1.61
EPHB3-202ENST00000473079 GH2P01242 217 aa25.09■■□□□ 1.61
EPHB3-202ENST00000473079 POLR3DP05423 398 aaPredicted RBP25.09■■□□□ 1.61
EPHB3-202ENST00000473079 GRK4P32298 578 aa25.09■■□□□ 1.61
EPHB3-202ENST00000473079 RRP1P56182 461 aaKnown RBP25.09■■□□□ 1.61
EPHB3-202ENST00000473079 PRKCZQ05513 592 aa25.09■■□□□ 1.61
EPHB3-202ENST00000473079 CERKLQ49MI3 558 aaPredicted RBP25.09■■□□□ 1.61
EPHB3-202ENST00000473079 ANKRD13CQ8N6S4 541 aa25.09■■□□□ 1.61
EPHB3-202ENST00000473079 DCP1AQ9NPI6 582 aaPredicted RBP25.09■■□□□ 1.61
EPHB3-202ENST00000473079 MCM9Q9NXL9 1143 aa25.09■■□□□ 1.61
EPHB3-202ENST00000473079 EN2P19622 333 aaPredicted RBP25.08■■□□□ 1.61
EPHB3-202ENST00000473079 SHMT1P34896 483 aa25.08■■□□□ 1.61
EPHB3-202ENST00000473079 ZSCAN25Q6NSZ9 544 aa25.08■■□□□ 1.61
EPHB3-202ENST00000473079 ATP8A2Q9NTI2 1148 aa25.08■■□□□ 1.61
EPHB3-202ENST00000473079 PCDHB15Q9Y5E8 787 aa25.08■■□□□ 1.61
EPHB3-202ENST00000473079 DDX60LQ5H9U9 1706 aaKnown RBP25.07■■□□□ 1.6
EPHB3-202ENST00000473079 ABCB5Q2M3G0 1257 aa25.07■■□□□ 1.6
EPHB3-202ENST00000473079 SDR42E1Q8WUS8 393 aa25.07■■□□□ 1.6
EPHB3-202ENST00000473079 ARMT1Q9H993 441 aa25.07■■□□□ 1.6
EPHB3-202ENST00000473079 MORF4L1Q9UBU8 362 aa25.07■■□□□ 1.6
EPHB3-202ENST00000473079 TNPO2O14787 897 aaKnown RBP25.06■■□□□ 1.6
EPHB3-202ENST00000473079 USP17L2Q6R6M4 530 aa25.06■■□□□ 1.6
EPHB3-202ENST00000473079 C12orf42Q96LP6 360 aa25.06■■□□□ 1.6
EPHB3-202ENST00000473079 CABP5Q9NP86 173 aa25.06■■□□□ 1.6
EPHB3-202ENST00000473079 EMILIN3Q9NT22 766 aa25.06■■□□□ 1.6
EPHB3-202ENST00000473079 GABRQQ9UN88 632 aa25.06■■□□□ 1.6
EPHB3-202ENST00000473079 MBD4O95243 580 aa25.05■■□□□ 1.6
EPHB3-202ENST00000473079 FLT3LGP49771 235 aa25.05■■□□□ 1.6
EPHB3-202ENST00000473079 IRX3P78415 501 aaPredicted RBP25.05■■□□□ 1.6
EPHB3-202ENST00000473079 IRF5Q13568 498 aa25.05■■□□□ 1.6
EPHB3-202ENST00000473079 SLFNL1Q499Z3 407 aa25.05■■□□□ 1.6
EPHB3-202ENST00000473079 SLAIN1Q8ND83 568 aa25.05■■□□□ 1.6
EPHB3-202ENST00000473079 COA7Q96BR5 231 aa25.05■■□□□ 1.6
EPHB3-202ENST00000473079 GPATCH3Q96I76 525 aa25.05■■□□□ 1.6
EPHB3-202ENST00000473079 P2RX7Q99572 595 aaKnown RBP25.05■■□□□ 1.6
EPHB3-202ENST00000473079 PXYLP1Q8TE99 480 aa25.04■■□□□ 1.6
EPHB3-202ENST00000473079 KIAA1683Q9H0B3 1180 aa25.04■■□□□ 1.6
EPHB3-202ENST00000473079 MGAMO43451 1857 aa25.03■■□□□ 1.6
EPHB3-202ENST00000473079 PRKAB2O43741 272 aa25.03■■□□□ 1.6
EPHB3-202ENST00000473079 USP14P54578 494 aa25.03■■□□□ 1.6
EPHB3-202ENST00000473079 HERVK_113P62684 666 aa25.03■■□□□ 1.6
EPHB3-202ENST00000473079 RAB3GAP1Q15042 981 aa25.03■■□□□ 1.6
EPHB3-202ENST00000473079 SWAP70Q9UH65 585 aa25.03■■□□□ 1.6
EPHB3-202ENST00000473079 CHGBP05060 677 aa25.02■■□□□ 1.6
EPHB3-202ENST00000473079 GUCY1A2P33402 732 aa25.02■■□□□ 1.6
EPHB3-202ENST00000473079 UBXN2AP68543 259 aa25.02■■□□□ 1.6
EPHB3-202ENST00000473079 MTFR1Q15390 333 aa25.02■■□□□ 1.6
EPHB3-202ENST00000473079 PRPF38BQ5VTL8 546 aaKnown RBP25.02■■□□□ 1.6
EPHB3-202ENST00000473079 KBTBD3Q8NAB2 608 aa25.02■■□□□ 1.6
EPHB3-202ENST00000473079 NAV1Q8NEY1 1877 aa25.01■■□□□ 1.59
EPHB3-202ENST00000473079 ADCY3O60266 1144 aa25.01■■□□□ 1.59
EPHB3-202ENST00000473079 MYCP01106 439 aaPredicted RBP25.01■■□□□ 1.59
EPHB3-202ENST00000473079 EVX2Q03828 476 aa25.01■■□□□ 1.59
EPHB3-202ENST00000473079 GTF3C2Q8WUA4 911 aaPredicted RBP25.01■■□□□ 1.59
EPHB3-202ENST00000473079 PUS7LQ9H0K6 701 aaKnown RBP25.01■■□□□ 1.59
EPHB3-202ENST00000473079 BRCA2P51587 3418 aa25■■□□□ 1.59
EPHB3-202ENST00000473079 CYP2D6P10635 497 aa25■■□□□ 1.59
EPHB3-202ENST00000473079 C12orf60Q5U649 245 aa25■■□□□ 1.59
EPHB3-202ENST00000473079 FEZ1Q99689 392 aa25■■□□□ 1.59
EPHB3-202ENST00000473079 RBPJLQ9UBG7 517 aa25■■□□□ 1.59
EPHB3-202ENST00000473079 BIN2Q9UBW5 565 aaPredicted RBP25■■□□□ 1.59
EPHB3-202ENST00000473079 TTC41PQ6P2S7 1318 aa25■■□□□ 1.59
EPHB3-202ENST00000473079 KIAA0100Q14667 2235 aaKnown RBP25■■□□□ 1.59
EPHB3-202ENST00000473079 USP17L15C9J2P7 530 aa24.99■■□□□ 1.59
EPHB3-202ENST00000473079 USP17L13C9JLJ4 530 aa24.99■■□□□ 1.59
EPHB3-202ENST00000473079 USP17L11C9JVI0 530 aa24.99■■□□□ 1.59
EPHB3-202ENST00000473079 USP17L18D6R9N7 530 aa24.99■■□□□ 1.59
EPHB3-202ENST00000473079 USP17L22D6RA61 530 aa24.99■■□□□ 1.59
EPHB3-202ENST00000473079 USP17L17D6RBQ6 530 aa24.99■■□□□ 1.59
EPHB3-202ENST00000473079 USP17L19D6RCP7 530 aa24.99■■□□□ 1.59
EPHB3-202ENST00000473079 USP17L20D6RJB6 530 aa24.99■■□□□ 1.59
EPHB3-202ENST00000473079 GJB1P08034 283 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms