RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 TSHZ3Q63HK5 1081 aa18.79■□□□□ 0.6
MRPL55-226ENST00000473066 SDR42E1Q8WUS8 393 aa18.79■□□□□ 0.6
MRPL55-226ENST00000473066 TMOD4Q9NZQ9 345 aa18.79■□□□□ 0.6
MRPL55-226ENST00000473066 ADGRA2Q96PE1 1338 aa18.78■□□□□ 0.6
MRPL55-226ENST00000473066 CYP2C8P10632 490 aa18.78■□□□□ 0.6
MRPL55-226ENST00000473066 C17orf99Q6UX52 265 aa18.78■□□□□ 0.6
MRPL55-226ENST00000473066 KBTBD3Q8NAB2 608 aa18.78■□□□□ 0.6
MRPL55-226ENST00000473066 WDR18Q9BV38 432 aa18.78■□□□□ 0.6
MRPL55-226ENST00000473066 CABP5Q9NP86 173 aa18.78■□□□□ 0.6
MRPL55-226ENST00000473066 ATP8A2Q9NTI2 1148 aa18.78■□□□□ 0.6
MRPL55-226ENST00000473066 PTPN22Q9Y2R2 807 aa18.78■□□□□ 0.6
MRPL55-226ENST00000473066 GLRX3O76003 335 aaKnown RBP18.77■□□□□ 0.6
MRPL55-226ENST00000473066 GNRH1P01148 92 aa18.77■□□□□ 0.6
MRPL55-226ENST00000473066 MX1P20591 662 aa18.77■□□□□ 0.6
MRPL55-226ENST00000473066 SOX10P56693 466 aa18.77■□□□□ 0.6
MRPL55-226ENST00000473066 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.6
MRPL55-226ENST00000473066 MTMR2Q13614 643 aa18.77■□□□□ 0.6
MRPL55-226ENST00000473066 CERKLQ49MI3 558 aaPredicted RBP18.77■□□□□ 0.6
MRPL55-226ENST00000473066 ANKRD45Q5TZF3 282 aa18.77■□□□□ 0.6
MRPL55-226ENST00000473066 FEZ1Q99689 392 aa18.77■□□□□ 0.6
MRPL55-226ENST00000473066 DCP1AQ9NPI6 582 aaPredicted RBP18.77■□□□□ 0.6
MRPL55-226ENST00000473066 RBBP6Q7Z6E9 1792 aaKnown RBP18.76■□□□□ 0.59
MRPL55-226ENST00000473066 USP17L10C9JJH3 530 aa18.76■□□□□ 0.59
MRPL55-226ENST00000473066 ECM2O94769 699 aaPredicted RBP18.76■□□□□ 0.59
MRPL55-226ENST00000473066 GH2P01242 217 aa18.76■□□□□ 0.59
MRPL55-226ENST00000473066 ZFYP08048 801 aaPredicted RBP18.76■□□□□ 0.59
MRPL55-226ENST00000473066 OSBPP22059 807 aa18.76■□□□□ 0.59
MRPL55-226ENST00000473066 PRMT2P55345 433 aa18.76■□□□□ 0.59
MRPL55-226ENST00000473066 ABCB5Q2M3G0 1257 aa18.76■□□□□ 0.59
MRPL55-226ENST00000473066 SLC4A4Q9Y6R1 1079 aa18.76■□□□□ 0.59
MRPL55-226ENST00000473066 C19orf81C9J6K1 198 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 FMNL1O95466 1100 aaPredicted RBP18.75■□□□□ 0.59
MRPL55-226ENST00000473066 HOXD10P28358 340 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 PLCD1P51178 756 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 BACE1P56817 501 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 RAB3GAP1Q15042 981 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 SLFNL1Q499Z3 407 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 SH3D19Q5HYK7 790 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 TREML2Q5T2D2 321 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 TATDN1Q6P1N9 297 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 APPBP2Q92624 585 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 SWAP70Q9UH65 585 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 TAOK2Q9UL54 1235 aa18.75■□□□□ 0.59
MRPL55-226ENST00000473066 BCRP11274 1271 aa18.74■□□□□ 0.59
MRPL55-226ENST00000473066 PSMC4P43686 418 aa18.74■□□□□ 0.59
MRPL55-226ENST00000473066 FCGRTP55899 365 aa18.74■□□□□ 0.59
MRPL55-226ENST00000473066 IRX3P78415 501 aaPredicted RBP18.74■□□□□ 0.59
MRPL55-226ENST00000473066 MLLT1Q03111 559 aaPredicted RBP18.74■□□□□ 0.59
MRPL55-226ENST00000473066 SLC9C1Q4G0N8 1177 aa18.74■□□□□ 0.59
MRPL55-226ENST00000473066 FSD1Q9BTV5 496 aa18.74■□□□□ 0.59
MRPL55-226ENST00000473066 ARHGAP39Q9C0H5 1083 aa18.74■□□□□ 0.59
MRPL55-226ENST00000473066 RWDD1Q9H446 243 aaPredicted RBP18.74■□□□□ 0.59
MRPL55-226ENST00000473066 MPHOSPH10O00566 681 aaKnown RBP18.73■□□□□ 0.59
MRPL55-226ENST00000473066 RNF113AO15541 343 aaKnown RBP18.73■□□□□ 0.59
MRPL55-226ENST00000473066 PRKAB2O43741 272 aa18.73■□□□□ 0.59
MRPL55-226ENST00000473066 SHMT1P34896 483 aa18.73■□□□□ 0.59
MRPL55-226ENST00000473066 SHROOM1Q2M3G4 852 aaPredicted RBP18.73■□□□□ 0.59
MRPL55-226ENST00000473066 OTUD7AQ8TE49 926 aaPredicted RBP18.73■□□□□ 0.59
MRPL55-226ENST00000473066 PUS7LQ9H0K6 701 aaKnown RBP18.73■□□□□ 0.59
MRPL55-226ENST00000473066 PTCH2Q9Y6C5 1203 aa18.73■□□□□ 0.59
MRPL55-226ENST00000473066 CHGBP05060 677 aa18.72■□□□□ 0.59
MRPL55-226ENST00000473066 CYP2D6P10635 497 aa18.72■□□□□ 0.59
MRPL55-226ENST00000473066 GCLCP48506 637 aaPredicted RBP18.72■□□□□ 0.59
MRPL55-226ENST00000473066 USP14P54578 494 aa18.72■□□□□ 0.59
MRPL55-226ENST00000473066 JAG1P78504 1218 aa18.72■□□□□ 0.59
MRPL55-226ENST00000473066 CAP1Q01518 475 aa18.72■□□□□ 0.59
MRPL55-226ENST00000473066 GABPAQ06546 454 aa18.72■□□□□ 0.59
MRPL55-226ENST00000473066 USP17L2Q6R6M4 530 aa18.72■□□□□ 0.59
MRPL55-226ENST00000473066 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
MRPL55-226ENST00000473066 PI4K2BQ8TCG2 481 aa18.72■□□□□ 0.59
MRPL55-226ENST00000473066 ARPP21Q9UBL0 812 aaPredicted RBP18.72■□□□□ 0.59
MRPL55-226ENST00000473066 DOCK3Q8IZD9 2030 aa18.71■□□□□ 0.59
MRPL55-226ENST00000473066 RGS19P49795 217 aa18.71■□□□□ 0.59
MRPL55-226ENST00000473066 ZYXQ15942 572 aaKnown RBP18.71■□□□□ 0.59
MRPL55-226ENST00000473066 FAM110CQ1W6H9 321 aa18.71■□□□□ 0.59
MRPL55-226ENST00000473066 ANKRD13CQ8N6S4 541 aa18.71■□□□□ 0.59
MRPL55-226ENST00000473066 EXOC6Q8TAG9 804 aa18.71■□□□□ 0.59
MRPL55-226ENST00000473066 RAET1EQ8TD07 263 aa18.71■□□□□ 0.59
MRPL55-226ENST00000473066 TRIM47Q96LD4 638 aa18.71■□□□□ 0.59
MRPL55-226ENST00000473066 ASCC2Q9H1I8 757 aaPredicted RBP18.71■□□□□ 0.59
MRPL55-226ENST00000473066 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
MRPL55-226ENST00000473066 MYPNQ86TC9 1320 aa18.71■□□□□ 0.59
MRPL55-226ENST00000473066 KIAA0100Q14667 2235 aaKnown RBP18.7■□□□□ 0.58
MRPL55-226ENST00000473066 USP17L12C9JPN9 530 aa18.7■□□□□ 0.58
MRPL55-226ENST00000473066 USP17L21D6R901 530 aa18.7■□□□□ 0.58
MRPL55-226ENST00000473066 GNAT2P19087 354 aa18.7■□□□□ 0.58
MRPL55-226ENST00000473066 ARMC5Q96C12 935 aa18.7■□□□□ 0.58
MRPL55-226ENST00000473066 SRRDQ9UH36 339 aa18.7■□□□□ 0.58
MRPL55-226ENST00000473066 TNPO2O14787 897 aaKnown RBP18.69■□□□□ 0.58
MRPL55-226ENST00000473066 GPAA1O43292 621 aa18.69■□□□□ 0.58
MRPL55-226ENST00000473066 C12orf60Q5U649 245 aa18.69■□□□□ 0.58
MRPL55-226ENST00000473066 TMEM179Q6ZVK1 233 aa18.69■□□□□ 0.58
MRPL55-226ENST00000473066 SLC44A5Q8NCS7 719 aa18.69■□□□□ 0.58
MRPL55-226ENST00000473066 STRBPQ96SI9 672 aaKnown RBP18.69■□□□□ 0.58
MRPL55-226ENST00000473066 APPP05067 770 aa18.68■□□□□ 0.58
MRPL55-226ENST00000473066 HOXA7P31268 230 aaPredicted RBP18.68■□□□□ 0.58
MRPL55-226ENST00000473066 TDO2P48775 406 aa18.68■□□□□ 0.58
MRPL55-226ENST00000473066 SEPT2Q15019 361 aa18.68■□□□□ 0.58
MRPL55-226ENST00000473066 GIMAP6Q6P9H5 292 aa18.68■□□□□ 0.58
MRPL55-226ENST00000473066 GTF3C2Q8WUA4 911 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms