RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 SDR42E1Q8WUS8 393 aa23.42■■□□□ 1.34
COMMD1-208ENST00000472729 FEZ1Q99689 392 aa23.42■■□□□ 1.34
COMMD1-208ENST00000472729 DNAJC18Q9H819 358 aa23.42■■□□□ 1.34
COMMD1-208ENST00000472729 DOCK2Q92608 1830 aa23.42■■□□□ 1.34
COMMD1-208ENST00000472729 GH2P01242 217 aa23.41■■□□□ 1.34
COMMD1-208ENST00000472729 RGS19P49795 217 aa23.41■■□□□ 1.34
COMMD1-208ENST00000472729 BACE1P56817 501 aa23.41■■□□□ 1.34
COMMD1-208ENST00000472729 RAB3GAP1Q15042 981 aa23.41■■□□□ 1.34
COMMD1-208ENST00000472729 ABCB5Q2M3G0 1257 aa23.41■■□□□ 1.34
COMMD1-208ENST00000472729 ATP8A2Q9NTI2 1148 aa23.41■■□□□ 1.34
COMMD1-208ENST00000472729 TTC41PQ6P2S7 1318 aa23.4■■□□□ 1.34
COMMD1-208ENST00000472729 PLCD1P51178 756 aa23.4■■□□□ 1.34
COMMD1-208ENST00000472729 IRX3P78415 501 aaPredicted RBP23.4■■□□□ 1.34
COMMD1-208ENST00000472729 ANKRD45Q5TZF3 282 aa23.4■■□□□ 1.34
COMMD1-208ENST00000472729 GCC1Q96CN9 775 aa23.4■■□□□ 1.34
COMMD1-208ENST00000472729 ARHGAP39Q9C0H5 1083 aa23.4■■□□□ 1.34
COMMD1-208ENST00000472729 DCP1AQ9NPI6 582 aaPredicted RBP23.4■■□□□ 1.34
COMMD1-208ENST00000472729 SLC4A4Q9Y6R1 1079 aa23.4■■□□□ 1.34
COMMD1-208ENST00000472729 MPHOSPH10O00566 681 aaKnown RBP23.39■■□□□ 1.33
COMMD1-208ENST00000472729 TREML2Q5T2D2 321 aa23.39■■□□□ 1.33
COMMD1-208ENST00000472729 TSHZ3Q63HK5 1081 aa23.39■■□□□ 1.33
COMMD1-208ENST00000472729 TATDN1Q6P1N9 297 aa23.39■■□□□ 1.33
COMMD1-208ENST00000472729 RAET1EQ8TD07 263 aa23.39■■□□□ 1.33
COMMD1-208ENST00000472729 TMEM106CQ9BVX2 250 aa23.39■■□□□ 1.33
COMMD1-208ENST00000472729 GLRX3O76003 335 aaKnown RBP23.38■■□□□ 1.33
COMMD1-208ENST00000472729 ZFYP08048 801 aaPredicted RBP23.38■■□□□ 1.33
COMMD1-208ENST00000472729 GCLCP48506 637 aaPredicted RBP23.38■■□□□ 1.33
COMMD1-208ENST00000472729 SH3D19Q5HYK7 790 aa23.38■■□□□ 1.33
COMMD1-208ENST00000472729 KBTBD3Q8NAB2 608 aa23.38■■□□□ 1.33
COMMD1-208ENST00000472729 PTCH2Q9Y6C5 1203 aa23.38■■□□□ 1.33
COMMD1-208ENST00000472729 BCRP11274 1271 aa23.37■■□□□ 1.33
COMMD1-208ENST00000472729 USP17L2Q6R6M4 530 aa23.37■■□□□ 1.33
COMMD1-208ENST00000472729 ANKRD13CQ8N6S4 541 aa23.37■■□□□ 1.33
COMMD1-208ENST00000472729 RWDD1Q9H446 243 aaPredicted RBP23.37■■□□□ 1.33
COMMD1-208ENST00000472729 SWAP70Q9UH65 585 aa23.37■■□□□ 1.33
COMMD1-208ENST00000472729 TAOK2Q9UL54 1235 aa23.37■■□□□ 1.33
COMMD1-208ENST00000472729 MX1P20591 662 aa23.36■■□□□ 1.33
COMMD1-208ENST00000472729 USP14P54578 494 aa23.36■■□□□ 1.33
COMMD1-208ENST00000472729 HDAC1Q13547 482 aaPredicted RBP23.36■■□□□ 1.33
COMMD1-208ENST00000472729 SLFNL1Q499Z3 407 aa23.36■■□□□ 1.33
COMMD1-208ENST00000472729 TRIM47Q96LD4 638 aa23.36■■□□□ 1.33
COMMD1-208ENST00000472729 SRRDQ9UH36 339 aa23.36■■□□□ 1.33
COMMD1-208ENST00000472729 ADGRA2Q96PE1 1338 aa23.35■■□□□ 1.33
COMMD1-208ENST00000472729 TNPO2O14787 897 aaKnown RBP23.35■■□□□ 1.33
COMMD1-208ENST00000472729 RNF113AO15541 343 aaKnown RBP23.35■■□□□ 1.33
COMMD1-208ENST00000472729 PRKAB2O43741 272 aa23.35■■□□□ 1.33
COMMD1-208ENST00000472729 JAG1P78504 1218 aa23.35■■□□□ 1.33
COMMD1-208ENST00000472729 CCAR1Q8IX12 1150 aaKnown RBP23.35■■□□□ 1.33
COMMD1-208ENST00000472729 COA7Q96BR5 231 aa23.35■■□□□ 1.33
COMMD1-208ENST00000472729 ASCC2Q9H1I8 757 aaPredicted RBP23.35■■□□□ 1.33
COMMD1-208ENST00000472729 BIN2Q9UBW5 565 aaPredicted RBP23.35■■□□□ 1.33
COMMD1-208ENST00000472729 LAMB1P07942 1786 aa23.35■■□□□ 1.33
COMMD1-208ENST00000472729 MYPNQ86TC9 1320 aa23.34■■□□□ 1.33
COMMD1-208ENST00000472729 ZYXQ15942 572 aaKnown RBP23.34■■□□□ 1.33
COMMD1-208ENST00000472729 ARMC5Q96C12 935 aa23.34■■□□□ 1.33
COMMD1-208ENST00000472729 FSD1Q9BTV5 496 aa23.34■■□□□ 1.33
COMMD1-208ENST00000472729 PUS7LQ9H0K6 701 aaKnown RBP23.34■■□□□ 1.33
COMMD1-208ENST00000472729 USP17L12C9JPN9 530 aa23.33■■□□□ 1.33
COMMD1-208ENST00000472729 USP17L21D6R901 530 aa23.33■■□□□ 1.33
COMMD1-208ENST00000472729 APPP05067 770 aa23.33■■□□□ 1.33
COMMD1-208ENST00000472729 SHMT1P34896 483 aa23.33■■□□□ 1.33
COMMD1-208ENST00000472729 CAP1Q01518 475 aa23.33■■□□□ 1.33
COMMD1-208ENST00000472729 FAM110CQ1W6H9 321 aa23.33■■□□□ 1.33
COMMD1-208ENST00000472729 SHROOM1Q2M3G4 852 aaPredicted RBP23.33■■□□□ 1.33
COMMD1-208ENST00000472729 APPBP2Q92624 585 aa23.33■■□□□ 1.33
COMMD1-208ENST00000472729 MYCP01106 439 aaPredicted RBP23.32■■□□□ 1.32
COMMD1-208ENST00000472729 CYP2D6P10635 497 aa23.32■■□□□ 1.32
COMMD1-208ENST00000472729 GNAT2P19087 354 aa23.32■■□□□ 1.32
COMMD1-208ENST00000472729 HOXA7P31268 230 aaPredicted RBP23.32■■□□□ 1.32
COMMD1-208ENST00000472729 DOCK1Q14185 1865 aa23.32■■□□□ 1.32
COMMD1-208ENST00000472729 CHGBP05060 677 aa23.31■■□□□ 1.32
COMMD1-208ENST00000472729 GABPAQ06546 454 aa23.31■■□□□ 1.32
COMMD1-208ENST00000472729 TMEM179Q6ZVK1 233 aa23.31■■□□□ 1.32
COMMD1-208ENST00000472729 SH3TC2Q8TF17 1288 aa23.31■■□□□ 1.32
COMMD1-208ENST00000472729 GTF3C2Q8WUA4 911 aaPredicted RBP23.31■■□□□ 1.32
COMMD1-208ENST00000472729 ARPP21Q9UBL0 812 aaPredicted RBP23.31■■□□□ 1.32
COMMD1-208ENST00000472729 PRKCZQ05513 592 aa23.3■■□□□ 1.32
COMMD1-208ENST00000472729 C12orf60Q5U649 245 aa23.3■■□□□ 1.32
COMMD1-208ENST00000472729 DYNLL2Q96FJ2 89 aa23.3■■□□□ 1.32
COMMD1-208ENST00000472729 ZNF333Q96JL9 665 aa23.3■■□□□ 1.32
COMMD1-208ENST00000472729 CCDC17Q96LX7 622 aa23.3■■□□□ 1.32
COMMD1-208ENST00000472729 STRBPQ96SI9 672 aaKnown RBP23.3■■□□□ 1.32
COMMD1-208ENST00000472729 NACAP1Q9BZK3 213 aa23.3■■□□□ 1.32
COMMD1-208ENST00000472729 CWC22Q9HCG8 908 aaKnown RBP23.3■■□□□ 1.32
COMMD1-208ENST00000472729 USP17L15C9J2P7 530 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 USP17L13C9JLJ4 530 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 USP17L11C9JVI0 530 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 USP17L18D6R9N7 530 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 USP17L22D6RA61 530 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 USP17L17D6RBQ6 530 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 USP17L19D6RCP7 530 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 USP17L20D6RJB6 530 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 GRK4P32298 578 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 TDO2P48775 406 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 UBXN2AP68543 259 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 USP17L24Q0WX57 530 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 SEPT2Q15019 361 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 OTUD7AQ8TE49 926 aaPredicted RBP23.29■■□□□ 1.32
COMMD1-208ENST00000472729 KIAA1683Q9H0B3 1180 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 SH2D4AQ9H788 454 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms