RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 JAKMIP1Q96N16 626 aaKnown RBP6.9□□□□□ -1.3
EPHA4-212ENST00000472696 TEPSINQ96N21 525 aa6.9□□□□□ -1.3
EPHA4-212ENST00000472696 MAP3K14Q99558 947 aa6.9□□□□□ -1.3
EPHA4-212ENST00000472696 KIF2CQ99661 725 aa6.9□□□□□ -1.3
EPHA4-212ENST00000472696 ZNF341Q9BYN7 854 aa6.9□□□□□ -1.3
EPHA4-212ENST00000472696 CABP5Q9NP86 173 aa6.9□□□□□ -1.3
EPHA4-212ENST00000472696 GGA3Q9NZ52 723 aa6.9□□□□□ -1.3
EPHA4-212ENST00000472696 CNTNAP1P78357 1384 aa6.9□□□□□ -1.31
EPHA4-212ENST00000472696 ADAMTSL1Q8N6G6 1762 aa6.9□□□□□ -1.31
EPHA4-212ENST00000472696 MYH8P13535 1937 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 TSPY2A6NKD2 308 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 PPP1R12BO60237 982 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-212ENST00000472696 CTNND1O60716 968 aaKnown RBP6.89□□□□□ -1.31
EPHA4-212ENST00000472696 EGFRP00533 1210 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 ASNSP08243 561 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 TSPY3P0CV98 308 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 TSPY8P0CW00 308 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 CALM1P0DP23 149 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 CALM2P0DP24 149 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 CALM3P0DP25 149 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 CASTP20810 708 aaKnown RBP6.89□□□□□ -1.31
EPHA4-212ENST00000472696 ANP32AP39687 249 aaKnown RBP6.89□□□□□ -1.31
EPHA4-212ENST00000472696 NOVP48745 357 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 NEK4P51957 841 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 HAND2P61296 217 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 TCP10Q12799 353 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 BECN1Q14457 450 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 MAP3K11Q16584 847 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 CERKLQ49MI3 558 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-212ENST00000472696 TMEM179Q6ZVK1 233 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 KRT26Q7Z3Y9 468 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 SGMS1Q86VZ5 419 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 MB21D2Q8IYB1 491 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-212ENST00000472696 UBAC1Q9BSL1 405 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 KANSL2Q9H9L4 492 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.89□□□□□ -1.31
EPHA4-212ENST00000472696 RRAGCQ9HB90 399 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-212ENST00000472696 ZSWIM5Q9P217 1185 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 ZNF112Q9UJU3 913 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 MTMR7Q9Y216 660 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 PCDHAC2Q9Y5I4 1007 aa6.89□□□□□ -1.31
EPHA4-212ENST00000472696 SHTN1A0MZ66 631 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 B4E1Z4 1266 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 DHX16O60231 1041 aaKnown RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 RANBP6O60518 1105 aaKnown RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 RASA1P20936 1047 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 SHMT1P34896 483 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 FGD1P98174 961 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 TFAP4Q01664 338 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 CTDSPL2Q05D32 466 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 ADCK5Q3MIX3 580 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 NOL9Q5SY16 702 aaKnown RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 RCSD1Q6JBY9 416 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 SYNE3Q6ZMZ3 975 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 SH3BP5LQ7L8J4 393 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 USP48Q86UV5 1035 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 TBC1D10CQ8IV04 446 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 DHX37Q8IY37 1157 aaKnown RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 MKL1Q969V6 931 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 ZNF274Q96GC6 653 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 ZSCAN10Q96SZ4 725 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 TMEM39BQ9GZU3 492 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 NBPF3Q9H094 633 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 SH2D4AQ9H788 454 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 GPBP1L1Q9HC44 474 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 SLC24A3Q9HC58 644 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 TOMM22Q9NS69 142 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 PDRG1Q9NUG6 133 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 NYAP2Q9P242 653 aa6.88□□□□□ -1.31
EPHA4-212ENST00000472696 SAP30BPQ9UHR5 308 aaKnown RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 ANGEL1Q9UNK9 670 aaKnown RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 POLR2AP24928 1970 aaKnown RBP6.88□□□□□ -1.31
EPHA4-212ENST00000472696 NEDD4P46934 1319 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 CCDC196A0A1B0GTZ2 297 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 IFIT3O14879 490 aaKnown RBP6.87□□□□□ -1.31
EPHA4-212ENST00000472696 PRC1O43663 620 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 KDM4AO75164 1064 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 TTLL1O95922 423 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 CAP2P40123 477 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 IREB2P48200 963 aaKnown RBP6.87□□□□□ -1.31
EPHA4-212ENST00000472696 CACNB3P54284 484 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 WTAPQ15007 396 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 ABCB5Q2M3G0 1257 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 EAPPQ56P03 285 aaPredicted RBP6.87□□□□□ -1.31
EPHA4-212ENST00000472696 CHADLQ6NUI6 762 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 STOX1Q6ZVD7 989 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 ARMC9Q7Z3E5 817 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 ZFPM1Q8IX07 1006 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 ANKRD13AQ8IZ07 590 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 IGDCC4Q8TDY8 1250 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 KLRG1Q96E93 195 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 AS3MTQ9HBK9 375 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 LIMCH1Q9UPQ0 1083 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 CLEC11AQ9Y240 323 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 GREB1LQ9C091 1923 aaPredicted RBP6.87□□□□□ -1.31
EPHA4-212ENST00000472696 SIPA1L1O43166 1804 aa6.87□□□□□ -1.31
EPHA4-212ENST00000472696 NID2Q14112 1375 aa6.86□□□□□ -1.31
EPHA4-212ENST00000472696 TNKSO95271 1327 aa6.86□□□□□ -1.31
EPHA4-212ENST00000472696 CYP2D7A0A087X1C5 515 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms