RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 TBC1D12O60347 775 aa20.62■□□□□ 0.89
PKD1-208ENST00000472577 GTF2A2P52657 109 aa20.62■□□□□ 0.89
PKD1-208ENST00000472577 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
PKD1-208ENST00000472577 WRNIP1Q96S55 665 aa20.62■□□□□ 0.89
PKD1-208ENST00000472577 DNAJC18Q9H819 358 aa20.62■□□□□ 0.89
PKD1-208ENST00000472577 EPB41L4AQ9HCS5 686 aaPredicted RBP20.62■□□□□ 0.89
PKD1-208ENST00000472577 DIAPH3Q9NSV4 1193 aa20.62■□□□□ 0.89
PKD1-208ENST00000472577 ZNF112Q9UJU3 913 aa20.62■□□□□ 0.89
PKD1-208ENST00000472577 CSADQ9Y600 493 aa20.62■□□□□ 0.89
PKD1-208ENST00000472577 PTCH2Q9Y6C5 1203 aa20.62■□□□□ 0.89
PKD1-208ENST00000472577 PHF20L1A8MW92 1017 aa20.61■□□□□ 0.89
PKD1-208ENST00000472577 HLA-DOAP06340 250 aa20.61■□□□□ 0.89
PKD1-208ENST00000472577 CYP2D6P10635 497 aa20.61■□□□□ 0.89
PKD1-208ENST00000472577 GNAT2P19087 354 aa20.61■□□□□ 0.89
PKD1-208ENST00000472577 INPP5BP32019 993 aa20.61■□□□□ 0.89
PKD1-208ENST00000472577 PLCD1P51178 756 aa20.61■□□□□ 0.89
PKD1-208ENST00000472577 ZNF589Q86UQ0 364 aaPredicted RBP20.61■□□□□ 0.89
PKD1-208ENST00000472577 METTL16Q86W50 562 aaKnown RBP20.61■□□□□ 0.89
PKD1-208ENST00000472577 ZKSCAN4Q969J2 545 aaPredicted RBP20.61■□□□□ 0.89
PKD1-208ENST00000472577 ZNF333Q96JL9 665 aa20.61■□□□□ 0.89
PKD1-208ENST00000472577 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.61■□□□□ 0.89
PKD1-208ENST00000472577 HIP1O00291 1037 aa20.6■□□□□ 0.89
PKD1-208ENST00000472577 FOXP2O15409 715 aa20.6■□□□□ 0.89
PKD1-208ENST00000472577 POLR3DP05423 398 aaPredicted RBP20.6■□□□□ 0.89
PKD1-208ENST00000472577 CWC27Q6UX04 472 aaKnown RBP20.6■□□□□ 0.89
PKD1-208ENST00000472577 TTC6Q86TZ1 520 aa20.6■□□□□ 0.89
PKD1-208ENST00000472577 FOXP4Q8IVH2 680 aaPredicted RBP20.6■□□□□ 0.89
PKD1-208ENST00000472577 ARHGAP39Q9C0H5 1083 aa20.6■□□□□ 0.89
PKD1-208ENST00000472577 ZFYVE28Q9HCC9 887 aa20.6■□□□□ 0.89
PKD1-208ENST00000472577 HERC5Q9UII4 1024 aaKnown RBP20.6■□□□□ 0.89
PKD1-208ENST00000472577 CYP2D7A0A087X1C5 515 aa20.59■□□□□ 0.89
PKD1-208ENST00000472577 PATL2C9JE40 543 aaKnown RBP20.59■□□□□ 0.89
PKD1-208ENST00000472577 USP17L12C9JPN9 530 aa20.59■□□□□ 0.89
PKD1-208ENST00000472577 USP17L21D6R901 530 aa20.59■□□□□ 0.89
PKD1-208ENST00000472577 SMIM22K7EJ46 135 aa20.59■□□□□ 0.89
PKD1-208ENST00000472577 BMP2KLQ5H9B9 411 aa20.59■□□□□ 0.89
PKD1-208ENST00000472577 VPS53Q5VIR6 699 aa20.59■□□□□ 0.89
PKD1-208ENST00000472577 GIMAP6Q6P9H5 292 aa20.59■□□□□ 0.89
PKD1-208ENST00000472577 EHD4Q9H223 541 aa20.59■□□□□ 0.89
PKD1-208ENST00000472577 CCDC171Q6TFL3 1326 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 BTBD19C9JJ37 291 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 IRF6O14896 467 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 APPP05067 770 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 CHMLP26374 656 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 RRP1BQ14684 758 aaKnown RBP20.58■□□□□ 0.89
PKD1-208ENST00000472577 HABP4Q5JVS0 413 aaKnown RBP20.58■□□□□ 0.89
PKD1-208ENST00000472577 CTR9Q6PD62 1173 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 IFNL3Q8IZI9 196 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 CRACR2BQ8N4Y2 399 aaPredicted RBP20.58■□□□□ 0.89
PKD1-208ENST00000472577 DDRGK1Q96HY6 314 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 IL25Q9H293 177 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 SERPINB13Q9UIV8 391 aa20.58■□□□□ 0.89
PKD1-208ENST00000472577 MYCP01106 439 aaPredicted RBP20.57■□□□□ 0.88
PKD1-208ENST00000472577 SLC9C1Q4G0N8 1177 aa20.57■□□□□ 0.88
PKD1-208ENST00000472577 C12orf60Q5U649 245 aa20.57■□□□□ 0.88
PKD1-208ENST00000472577 ERO1BQ86YB8 467 aa20.57■□□□□ 0.88
PKD1-208ENST00000472577 TDO2P48775 406 aa20.56■□□□□ 0.88
PKD1-208ENST00000472577 GABPAQ06546 454 aa20.56■□□□□ 0.88
PKD1-208ENST00000472577 NOL9Q5SY16 702 aaKnown RBP20.56■□□□□ 0.88
PKD1-208ENST00000472577 TRIM34Q9BYJ4 488 aa20.56■□□□□ 0.88
PKD1-208ENST00000472577 ARPP21Q9UBL0 812 aaPredicted RBP20.56■□□□□ 0.88
PKD1-208ENST00000472577 DOCK1Q14185 1865 aa20.56■□□□□ 0.88
PKD1-208ENST00000472577 TLR2O60603 784 aa20.55■□□□□ 0.88
PKD1-208ENST00000472577 ECM2O94769 699 aaPredicted RBP20.55■□□□□ 0.88
PKD1-208ENST00000472577 CETPP11597 493 aa20.55■□□□□ 0.88
PKD1-208ENST00000472577 PPIL2Q13356 520 aa20.55■□□□□ 0.88
PKD1-208ENST00000472577 SBK1Q52WX2 424 aa20.55■□□□□ 0.88
PKD1-208ENST00000472577 SCYL3Q8IZE3 742 aa20.55■□□□□ 0.88
PKD1-208ENST00000472577 SH3TC2Q8TF17 1288 aa20.55■□□□□ 0.88
PKD1-208ENST00000472577 DYNLL2Q96FJ2 89 aa20.55■□□□□ 0.88
PKD1-208ENST00000472577 NACAP1Q9BZK3 213 aa20.55■□□□□ 0.88
PKD1-208ENST00000472577 CTNND1O60716 968 aaKnown RBP20.54■□□□□ 0.88
PKD1-208ENST00000472577 HSPD1P10809 573 aaKnown RBP20.54■□□□□ 0.88
PKD1-208ENST00000472577 SHMT1P34896 483 aa20.54■□□□□ 0.88
PKD1-208ENST00000472577 JAG1P78504 1218 aa20.54■□□□□ 0.88
PKD1-208ENST00000472577 LACTBP83111 547 aaPredicted RBP20.54■□□□□ 0.88
PKD1-208ENST00000472577 SNAPC2Q13487 334 aa20.54■□□□□ 0.88
PKD1-208ENST00000472577 TATDN1Q6P1N9 297 aa20.54■□□□□ 0.88
PKD1-208ENST00000472577 AMOTL1Q8IY63 956 aa20.54■□□□□ 0.88
PKD1-208ENST00000472577 SLC44A5Q8NCS7 719 aa20.54■□□□□ 0.88
PKD1-208ENST00000472577 NAPBQ9H115 298 aa20.54■□□□□ 0.88
PKD1-208ENST00000472577 ATAD5Q96QE3 1844 aa20.53■□□□□ 0.88
PKD1-208ENST00000472577 MINDY4BA8MYZ0 360 aa20.53■□□□□ 0.88
PKD1-208ENST00000472577 CTGFP29279 349 aa20.53■□□□□ 0.88
PKD1-208ENST00000472577 CAP2P40123 477 aa20.53■□□□□ 0.88
PKD1-208ENST00000472577 MFAP1P55081 439 aaKnown RBP20.53■□□□□ 0.88
PKD1-208ENST00000472577 SHROOM1Q2M3G4 852 aaPredicted RBP20.53■□□□□ 0.88
PKD1-208ENST00000472577 TMEM106CQ9BVX2 250 aa20.53■□□□□ 0.88
PKD1-208ENST00000472577 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.53■□□□□ 0.88
PKD1-208ENST00000472577 RAD50Q92878 1312 aa20.53■□□□□ 0.88
PKD1-208ENST00000472577 ALX1Q15699 326 aa20.52■□□□□ 0.88
PKD1-208ENST00000472577 RUFY2Q8WXA3 655 aa20.52■□□□□ 0.88
PKD1-208ENST00000472577 ZCCHC17Q9NP64 241 aaKnown RBP20.52■□□□□ 0.88
PKD1-208ENST00000472577 ADGRA2Q96PE1 1338 aa20.52■□□□□ 0.87
PKD1-208ENST00000472577 ROBO3Q96MS0 1386 aa20.51■□□□□ 0.87
PKD1-208ENST00000472577 GDF11O95390 407 aa20.51■□□□□ 0.87
PKD1-208ENST00000472577 PTPRAP18433 802 aa20.51■□□□□ 0.87
PKD1-208ENST00000472577 C16orf86Q6ZW13 317 aa20.51■□□□□ 0.87
PKD1-208ENST00000472577 CCDC84Q86UT8 332 aaPredicted RBP20.51■□□□□ 0.87
PKD1-208ENST00000472577 PICK1Q9NRD5 415 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms