RNA–Protein interactions for RNA: ENST00000472381.5

RPUSD3-213, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-213ENST00000472381 HABP4Q5JVS0 413 aaKnown RBP24.49■■□□□ 1.51
RPUSD3-213ENST00000472381 TMED8Q6PL24 325 aaPredicted RBP24.49■■□□□ 1.51
RPUSD3-213ENST00000472381 MIGA1Q8NAN2 632 aa24.49■■□□□ 1.51
RPUSD3-213ENST00000472381 UNC93B1Q9H1C4 597 aa24.49■■□□□ 1.51
RPUSD3-213ENST00000472381 TAOK2Q9UL54 1235 aa24.49■■□□□ 1.51
RPUSD3-213ENST00000472381 NDUFB9Q9Y6M9 179 aa24.49■■□□□ 1.51
RPUSD3-213ENST00000472381 CEP290O15078 2479 aa24.48■■□□□ 1.51
RPUSD3-213ENST00000472381 GDF11O95390 407 aa24.48■■□□□ 1.51
RPUSD3-213ENST00000472381 INHAP05111 366 aa24.48■■□□□ 1.51
RPUSD3-213ENST00000472381 USP5P45974 858 aa24.48■■□□□ 1.51
RPUSD3-213ENST00000472381 BACE1P56817 501 aa24.48■■□□□ 1.51
RPUSD3-213ENST00000472381 C19orf81C9J6K1 198 aa24.47■■□□□ 1.51
RPUSD3-213ENST00000472381 IRX3P78415 501 aaPredicted RBP24.47■■□□□ 1.51
RPUSD3-213ENST00000472381 JAG1P78504 1218 aa24.47■■□□□ 1.51
RPUSD3-213ENST00000472381 U2AF1L4Q8WU68 220 aaKnown RBP24.47■■□□□ 1.51
RPUSD3-213ENST00000472381 ANTXR1Q9H6X2 564 aa24.47■■□□□ 1.51
RPUSD3-213ENST00000472381 ZBTB21Q9ULJ3 1066 aa24.47■■□□□ 1.51
RPUSD3-213ENST00000472381 RHPN1Q8TCX5 695 aa24.46■■□□□ 1.51
RPUSD3-213ENST00000472381 IL1RAPL2Q9NP60 686 aa24.46■■□□□ 1.51
RPUSD3-213ENST00000472381 USP17L10C9JJH3 530 aa24.45■■□□□ 1.5
RPUSD3-213ENST00000472381 HMMRO75330 724 aa24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 HOXA7P31268 230 aaPredicted RBP24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 TTF1Q15361 905 aaPredicted RBP24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 SHROOM1Q2M3G4 852 aaPredicted RBP24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 RPAP2Q8IXW5 612 aaPredicted RBP24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 CLASRPQ8N2M8 674 aaKnown RBP24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 DPF3Q92784 378 aa24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 HTATIP2Q9BUP3 242 aa24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 MORF4L1Q9UBU8 362 aa24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 DDX19BQ9UMR2 479 aa24.44■■□□□ 1.5
RPUSD3-213ENST00000472381 H0YGN5 161 aa24.43■■□□□ 1.5
RPUSD3-213ENST00000472381 FARP2O94887 1054 aaPredicted RBP24.43■■□□□ 1.5
RPUSD3-213ENST00000472381 SGPL1O95470 568 aa24.43■■□□□ 1.5
RPUSD3-213ENST00000472381 UBE2Q1Q7Z7E8 422 aa24.43■■□□□ 1.5
RPUSD3-213ENST00000472381 SERPINB13Q9UIV8 391 aa24.43■■□□□ 1.5
RPUSD3-213ENST00000472381 APBB1O00213 710 aa24.42■■□□□ 1.5
RPUSD3-213ENST00000472381 GH2P01242 217 aa24.42■■□□□ 1.5
RPUSD3-213ENST00000472381 TTC6Q86TZ1 520 aa24.42■■□□□ 1.5
RPUSD3-213ENST00000472381 KIF1BPQ96EK5 621 aa24.42■■□□□ 1.5
RPUSD3-213ENST00000472381 EHD4Q9H223 541 aa24.42■■□□□ 1.5
RPUSD3-213ENST00000472381 IFIT2P09913 472 aaKnown RBP24.41■■□□□ 1.5
RPUSD3-213ENST00000472381 CAPN2P17655 700 aa24.41■■□□□ 1.5
RPUSD3-213ENST00000472381 HERVK_113P62684 666 aa24.41■■□□□ 1.5
RPUSD3-213ENST00000472381 TATDN1Q6P1N9 297 aa24.41■■□□□ 1.5
RPUSD3-213ENST00000472381 DEFB118Q96PH6 123 aa24.41■■□□□ 1.5
RPUSD3-213ENST00000472381 P2RX7Q99572 595 aaKnown RBP24.41■■□□□ 1.5
RPUSD3-213ENST00000472381 COG6Q9Y2V7 657 aa24.41■■□□□ 1.5
RPUSD3-213ENST00000472381 MAGEB6P1A0A0J9YX57 407 aa24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 TFRCP02786 760 aaKnown RBP24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 HMGCRP04035 888 aa24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 USP17L2Q6R6M4 530 aa24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 GPRC5AQ8NFJ5 357 aa24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 FEZ1Q99689 392 aa24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 CHMP4BQ9H444 224 aaKnown RBP24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 PAK6Q9NQU5 681 aaPredicted RBP24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 COLQQ9Y215 455 aaPredicted RBP24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 NAV1Q8NEY1 1877 aa24.4■■□□□ 1.5
RPUSD3-213ENST00000472381 SLC9C2Q5TAH2 1124 aa24.39■■□□□ 1.49
RPUSD3-213ENST00000472381 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.39■■□□□ 1.49
RPUSD3-213ENST00000472381 RIOK1Q9BRS2 568 aaKnown RBP24.39■■□□□ 1.49
RPUSD3-213ENST00000472381 BCL11AQ9H165 835 aa24.39■■□□□ 1.49
RPUSD3-213ENST00000472381 EMILIN3Q9NT22 766 aa24.39■■□□□ 1.49
RPUSD3-213ENST00000472381 ZBTB40Q9NUA8 1239 aa24.39■■□□□ 1.49
RPUSD3-213ENST00000472381 GJD2Q9UKL4 321 aa24.39■■□□□ 1.49
RPUSD3-213ENST00000472381 DDX60LQ5H9U9 1706 aaKnown RBP24.38■■□□□ 1.49
RPUSD3-213ENST00000472381 PDE6AP16499 860 aa24.38■■□□□ 1.49
RPUSD3-213ENST00000472381 CERKLQ49MI3 558 aaPredicted RBP24.38■■□□□ 1.49
RPUSD3-213ENST00000472381 GTF3C2Q8WUA4 911 aaPredicted RBP24.38■■□□□ 1.49
RPUSD3-213ENST00000472381 DNAJC2Q99543 621 aaKnown RBP24.38■■□□□ 1.49
RPUSD3-213ENST00000472381 PLXNB2O15031 1838 aa24.38■■□□□ 1.49
RPUSD3-213ENST00000472381 GOLIM4O00461 696 aa24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 RAB11FIP3O75154 756 aa24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 POLR3DP05423 398 aaPredicted RBP24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 RAB3GAP1Q15042 981 aa24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 ABCB5Q2M3G0 1257 aa24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 CCAR1Q8IX12 1150 aaKnown RBP24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 SIRT2Q8IXJ6 389 aa24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 CRNKL1Q9BZJ0 848 aaKnown RBP24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 TXNRD2Q9NNW7 524 aa24.37■■□□□ 1.49
RPUSD3-213ENST00000472381 ZYXQ15942 572 aaKnown RBP24.36■■□□□ 1.49
RPUSD3-213ENST00000472381 SOCS4Q8WXH5 440 aa24.36■■□□□ 1.49
RPUSD3-213ENST00000472381 CABP5Q9NP86 173 aa24.36■■□□□ 1.49
RPUSD3-213ENST00000472381 RBPJLQ9UBG7 517 aa24.36■■□□□ 1.49
RPUSD3-213ENST00000472381 NR2E3Q9Y5X4 410 aa24.36■■□□□ 1.49
RPUSD3-213ENST00000472381 ZNF532Q9HCE3 1301 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 PEX10O60683 326 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 MAPK4P31152 587 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 PLCD1P51178 756 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 USP14P54578 494 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 PDE3AQ14432 1141 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 C12orf42Q96LP6 360 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 NUDT12Q9BQG2 462 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 PAGR1Q9BTK6 254 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 CRISPLD2Q9H0B8 497 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 RCAN3Q9UKA8 241 aa24.35■■□□□ 1.49
RPUSD3-213ENST00000472381 CYP2B6P20813 491 aa24.34■■□□□ 1.49
RPUSD3-213ENST00000472381 SHMT1P34896 483 aa24.34■■□□□ 1.49
RPUSD3-213ENST00000472381 ERVK-9P63128 1117 aa24.34■■□□□ 1.49
RPUSD3-213ENST00000472381 ERVK-24P63145 666 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms