RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-209ENST00000472339 TRIM22Q8IYM9 498 aa16.91■□□□□ 0.3
FXR1-209ENST00000472339 GRAMD1CQ8IYS0 662 aa16.91■□□□□ 0.3
FXR1-209ENST00000472339 RASSF4Q9H2L5 321 aa16.91■□□□□ 0.3
FXR1-209ENST00000472339 L1RE1Q9UN81 338 aa16.91■□□□□ 0.3
FXR1-209ENST00000472339 TTF2Q9UNY4 1162 aaKnown RBP16.91■□□□□ 0.3
FXR1-209ENST00000472339 ADAMTSL3P82987 1691 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 IFIT3O14879 490 aaKnown RBP16.9■□□□□ 0.3
FXR1-209ENST00000472339 MFAP3LO75121 409 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 TUBBP07437 444 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 FECHP22830 423 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 TCIRG1Q13488 830 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 ZNF569Q5MCW4 686 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 GBP3Q9H0R5 595 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 ADD3Q9UEY8 706 aaKnown RBP16.9■□□□□ 0.3
FXR1-209ENST00000472339 VGLL3A8MV65 326 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 PCCAP05165 728 aaPredicted RBP16.9■□□□□ 0.3
FXR1-209ENST00000472339 IVLP07476 585 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 TRIM28Q13263 835 aaKnown RBP16.9■□□□□ 0.3
FXR1-209ENST00000472339 FILIP1LQ4L180 1135 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 METTL24Q5JXM2 366 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 CNGA4Q8IV77 575 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 PNKPQ96T60 521 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 PIH1D3Q9NQM4 214 aaKnown RBP16.9■□□□□ 0.3
FXR1-209ENST00000472339 VPS18Q9P253 973 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
FXR1-209ENST00000472339 ZNF532Q9HCE3 1301 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 MYO1CO00159 1063 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 GUCY1A2P33402 732 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 MCM6Q14566 821 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 WHAMMP3Q1A5X7 153 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 CDKAL1Q5VV42 579 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 LEKR1Q6ZMV7 388 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 CNNM2Q9H8M5 875 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 ZSWIM5Q9P217 1185 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 KCNJ14Q9UNX9 436 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 RIPOR2Q9Y4F9 1068 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 PCDHB6Q9Y5E3 794 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 CHD4Q14839 1912 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 ITIH6Q6UXX5 1313 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 SYNRGQ9UMZ2 1314 aa16.89■□□□□ 0.29
FXR1-209ENST00000472339 MYO5AQ9Y4I1 1855 aaKnown RBP16.89■□□□□ 0.29
FXR1-209ENST00000472339 RPS6KA5O75582 802 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 PDE6AP16499 860 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 CUL4BQ13620 913 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 STRBPQ96SI9 672 aaKnown RBP16.88■□□□□ 0.29
FXR1-209ENST00000472339 CSRNP2Q9H175 543 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 ABCB6Q9NP58 842 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 SEC31BQ9NQW1 1179 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 ZNF142P52746 1687 aaPredicted RBP16.88■□□□□ 0.29
FXR1-209ENST00000472339 IDH1O75874 414 aaKnown RBP16.88■□□□□ 0.29
FXR1-209ENST00000472339 DEXIO95424 95 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 PIP4K2BP78356 416 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 SRLQ86TD4 932 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.29
FXR1-209ENST00000472339 MYO1AQ9UBC5 1043 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 WWC3Q9ULE0 1092 aa16.88■□□□□ 0.29
FXR1-209ENST00000472339 PAPPAQ13219 1627 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 TCRBV5S4A2TA0A5A2 114 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 ERVV-2B6SEH9 535 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 RTN1Q16799 776 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 TMTC1Q8IUR5 882 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 SLC35F6Q8N357 371 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 CPLX3Q8WVH0 158 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 AIDAQ96BJ3 306 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
FXR1-209ENST00000472339 NAPGQ99747 312 aaPredicted RBP16.87■□□□□ 0.29
FXR1-209ENST00000472339 KRT23Q9C075 422 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 STRN4Q9NRL3 753 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 TIAM2Q8IVF5 1701 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 A0A0U1RQJ8 604 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 CTAGE15A4D2H0 777 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 PATL2C9JE40 543 aaKnown RBP16.87■□□□□ 0.29
FXR1-209ENST00000472339 CTAGE8P0CG41 777 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 SH3RF1Q7Z6J0 888 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 CTAGE6Q86UF2 777 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 CTAGE4Q8IX94 777 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 ATRIPQ8WXE1 791 aa16.87■□□□□ 0.29
FXR1-209ENST00000472339 CCDC196A0A1B0GTZ2 297 aa16.86■□□□□ 0.29
FXR1-209ENST00000472339 CASP14P31944 242 aa16.86■□□□□ 0.29
FXR1-209ENST00000472339 USP49Q70CQ1 688 aa16.86■□□□□ 0.29
FXR1-209ENST00000472339 ZBTB38Q8NAP3 1195 aaPredicted RBP16.86■□□□□ 0.29
FXR1-209ENST00000472339 GSDMAQ96QA5 445 aa16.86■□□□□ 0.29
FXR1-209ENST00000472339 RRP15Q9Y3B9 282 aaKnown RBP16.86■□□□□ 0.29
FXR1-209ENST00000472339 GYPCP04921 128 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
FXR1-209ENST00000472339 NR5A1Q13285 461 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 AKNAD1Q5T1N1 836 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 KLHL10Q6JEL2 608 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 LDHAL6AQ6ZMR3 332 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 IFNL3Q8IZI9 196 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 CRACR2BQ8N4Y2 399 aaPredicted RBP16.85■□□□□ 0.29
FXR1-209ENST00000472339 FAM71BQ8TC56 605 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 NAPBQ9H115 298 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 ACBD3Q9H3P7 528 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 INCENPQ9NQS7 918 aa16.85■□□□□ 0.29
FXR1-209ENST00000472339 LCMT1Q9UIC8 334 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms