RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 FRMPD3Q5JV73 1810 aa12.89□□□□□ -0.35
SPC25-203ENST00000472216 FGBP02675 491 aa12.88□□□□□ -0.35
SPC25-203ENST00000472216 RGS2P41220 211 aa12.88□□□□□ -0.35
SPC25-203ENST00000472216 FAAP100Q0VG06 881 aa12.88□□□□□ -0.35
SPC25-203ENST00000472216 RSPO4Q2I0M5 234 aaPredicted RBP12.88□□□□□ -0.35
SPC25-203ENST00000472216 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
SPC25-203ENST00000472216 ZZEF1O43149 2961 aa12.88□□□□□ -0.35
SPC25-203ENST00000472216 UTYO14607 1347 aa12.88□□□□□ -0.35
SPC25-203ENST00000472216 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
SPC25-203ENST00000472216 ADRB1P08588 477 aa12.87□□□□□ -0.35
SPC25-203ENST00000472216 TMEM67Q5HYA8 995 aa12.87□□□□□ -0.35
SPC25-203ENST00000472216 FAM89AQ96GI7 184 aa12.87□□□□□ -0.35
SPC25-203ENST00000472216 TOX2Q96NM4 488 aa12.87□□□□□ -0.35
SPC25-203ENST00000472216 GBF1Q92538 1859 aa12.87□□□□□ -0.35
SPC25-203ENST00000472216 CA3P07451 260 aa12.86□□□□□ -0.35
SPC25-203ENST00000472216 SDHBP21912 280 aa12.86□□□□□ -0.35
SPC25-203ENST00000472216 MIGA2Q7L4E1 593 aa12.86□□□□□ -0.35
SPC25-203ENST00000472216 TXNRD3Q86VQ6 643 aa12.86□□□□□ -0.35
SPC25-203ENST00000472216 SLC4A7Q9Y6M7 1214 aa12.86□□□□□ -0.35
SPC25-203ENST00000472216 ZXDAP98168 799 aa12.85□□□□□ -0.35
SPC25-203ENST00000472216 TDRD7Q8NHU6 1098 aaKnown RBP12.85□□□□□ -0.35
SPC25-203ENST00000472216 NEK9Q8TD19 979 aa12.85□□□□□ -0.35
SPC25-203ENST00000472216 KCNG4Q8TDN1 519 aa12.85□□□□□ -0.35
SPC25-203ENST00000472216 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
SPC25-203ENST00000472216 APBA2Q99767 749 aa12.85□□□□□ -0.35
SPC25-203ENST00000472216 AGTPBP1Q9UPW5 1226 aa12.85□□□□□ -0.35
SPC25-203ENST00000472216 PLXNB2O15031 1838 aa12.85□□□□□ -0.35
SPC25-203ENST00000472216 FRYQ5TBA9 3013 aa12.84□□□□□ -0.35
SPC25-203ENST00000472216 CCT4P50991 539 aaKnown RBP12.84□□□□□ -0.35
SPC25-203ENST00000472216 CDCA8Q53HL2 280 aa12.84□□□□□ -0.35
SPC25-203ENST00000472216 NOL9Q5SY16 702 aaKnown RBP12.84□□□□□ -0.35
SPC25-203ENST00000472216 ANKRD33Q7Z3H0 272 aa12.84□□□□□ -0.35
SPC25-203ENST00000472216 ANKRD18AQ8IVF6 992 aa12.84□□□□□ -0.35
SPC25-203ENST00000472216 USP6NLQ92738 828 aa12.84□□□□□ -0.35
SPC25-203ENST00000472216 IL23AQ9NPF7 189 aa12.84□□□□□ -0.35
SPC25-203ENST00000472216 ZNF112Q9UJU3 913 aa12.84□□□□□ -0.35
SPC25-203ENST00000472216 ZHX2Q9Y6X8 837 aa12.84□□□□□ -0.35
SPC25-203ENST00000472216 HELZ2Q9BYK8 2649 aaKnown RBP12.84□□□□□ -0.35
SPC25-203ENST00000472216 ARAP2Q8WZ64 1704 aa12.83□□□□□ -0.36
SPC25-203ENST00000472216 H3BQ06 376 aaPredicted RBP12.83□□□□□ -0.36
SPC25-203ENST00000472216 PITPNM1O00562 1244 aa12.83□□□□□ -0.36
SPC25-203ENST00000472216 LPXNO60711 386 aa12.83□□□□□ -0.36
SPC25-203ENST00000472216 FKBP1AP62942 108 aaKnown RBP12.83□□□□□ -0.36
SPC25-203ENST00000472216 OTOP2Q7RTS6 562 aa12.83□□□□□ -0.36
SPC25-203ENST00000472216 DZIP1LQ8IYY4 767 aaKnown RBP12.83□□□□□ -0.36
SPC25-203ENST00000472216 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
SPC25-203ENST00000472216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.83□□□□□ -0.36
SPC25-203ENST00000472216 SERPINA10Q9UK55 444 aa12.83□□□□□ -0.36
SPC25-203ENST00000472216 SIGLEC14Q08ET2 396 aa12.82□□□□□ -0.36
SPC25-203ENST00000472216 TBX21Q9UL17 535 aa12.82□□□□□ -0.36
SPC25-203ENST00000472216 IRS4O14654 1257 aaPredicted RBP12.81□□□□□ -0.36
SPC25-203ENST00000472216 ATP2A2P16615 1042 aaKnown RBP12.81□□□□□ -0.36
SPC25-203ENST00000472216 LRRC41Q15345 812 aa12.81□□□□□ -0.36
SPC25-203ENST00000472216 LRSAM1Q6UWE0 723 aa12.81□□□□□ -0.36
SPC25-203ENST00000472216 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
SPC25-203ENST00000472216 CCAR1Q8IX12 1150 aaKnown RBP12.81□□□□□ -0.36
SPC25-203ENST00000472216 CD209Q9NNX6 404 aa12.81□□□□□ -0.36
SPC25-203ENST00000472216 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
SPC25-203ENST00000472216 LEMD3Q9Y2U8 911 aa12.81□□□□□ -0.36
SPC25-203ENST00000472216 LMNAP02545 664 aaKnown RBP12.8□□□□□ -0.36
SPC25-203ENST00000472216 MAPK4P31152 587 aa12.8□□□□□ -0.36
SPC25-203ENST00000472216 ATXN1P54253 815 aaKnown RBP12.8□□□□□ -0.36
SPC25-203ENST00000472216 TAP1Q03518 808 aa12.8□□□□□ -0.36
SPC25-203ENST00000472216 RTL5Q5HYW3 569 aaPredicted RBP12.8□□□□□ -0.36
SPC25-203ENST00000472216 MORN1Q5T089 497 aa12.8□□□□□ -0.36
SPC25-203ENST00000472216 HINFPQ9BQA5 517 aa12.8□□□□□ -0.36
SPC25-203ENST00000472216 MORF4L1Q9UBU8 362 aa12.8□□□□□ -0.36
SPC25-203ENST00000472216 AFG3L2Q9Y4W6 797 aa12.8□□□□□ -0.36
SPC25-203ENST00000472216 HSP90B1P14625 803 aaKnown RBP12.79□□□□□ -0.36
SPC25-203ENST00000472216 PROSER3Q2NL68 480 aa12.79□□□□□ -0.36
SPC25-203ENST00000472216 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
SPC25-203ENST00000472216 PRR23BQ6ZRT6 265 aa12.79□□□□□ -0.36
SPC25-203ENST00000472216 FAM83AQ86UY5 434 aa12.79□□□□□ -0.36
SPC25-203ENST00000472216 EDC3Q96F86 508 aaKnown RBP12.79□□□□□ -0.36
SPC25-203ENST00000472216 THUMPD2Q9BTF0 503 aaKnown RBP12.79□□□□□ -0.36
SPC25-203ENST00000472216 SEMA4AQ9H3S1 761 aa12.79□□□□□ -0.36
SPC25-203ENST00000472216 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
SPC25-203ENST00000472216 MINPP1Q9UNW1 487 aa12.79□□□□□ -0.36
SPC25-203ENST00000472216 ATP2B2Q01814 1243 aa12.78□□□□□ -0.36
SPC25-203ENST00000472216 TREML2Q5T2D2 321 aa12.78□□□□□ -0.36
SPC25-203ENST00000472216 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
SPC25-203ENST00000472216 ASIC4Q96FT7 647 aa12.78□□□□□ -0.36
SPC25-203ENST00000472216 HNRNPABQ99729 332 aaKnown RBP12.78□□□□□ -0.36
SPC25-203ENST00000472216 PABPC4Q13310 644 aaKnown RBP eCLIP12.77□□□□□ -0.37
SPC25-203ENST00000472216 GPRC5AQ8NFJ5 357 aa12.77□□□□□ -0.37
SPC25-203ENST00000472216 TMOD2Q9NZR1 351 aa12.77□□□□□ -0.37
SPC25-203ENST00000472216 FLRT1Q9NZU1 646 aa12.77□□□□□ -0.37
SPC25-203ENST00000472216 ZBBXA8MT70 800 aa12.76□□□□□ -0.37
SPC25-203ENST00000472216 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
SPC25-203ENST00000472216 PTPRAP18433 802 aa12.76□□□□□ -0.37
SPC25-203ENST00000472216 CACNB3P54284 484 aa12.76□□□□□ -0.37
SPC25-203ENST00000472216 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
SPC25-203ENST00000472216 GPR142Q7Z601 462 aa12.76□□□□□ -0.37
SPC25-203ENST00000472216 TRPV1Q8NER1 839 aa12.76□□□□□ -0.37
SPC25-203ENST00000472216 RTF1Q92541 710 aaKnown RBP12.76□□□□□ -0.37
SPC25-203ENST00000472216 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
SPC25-203ENST00000472216 A0A1W2PQ45 241 aaPredicted RBP12.75□□□□□ -0.37
SPC25-203ENST00000472216 A0A1W2PQY0 241 aa12.75□□□□□ -0.37
SPC25-203ENST00000472216 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
SPC25-203ENST00000472216 CYBAP13498 195 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms