RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 CPA4Q9UI42 421 aa10.06□□□□□ -0.8
TSPAN1-205ENST00000472170 AGTPBP1Q9UPW5 1226 aa10.06□□□□□ -0.8
TSPAN1-205ENST00000472170 PTPN22Q9Y2R2 807 aa10.06□□□□□ -0.8
TSPAN1-205ENST00000472170 PCDHB15Q9Y5E8 787 aa10.06□□□□□ -0.8
TSPAN1-205ENST00000472170 SLC4A4Q9Y6R1 1079 aa10.06□□□□□ -0.8
TSPAN1-205ENST00000472170 RNF113AO15541 343 aaKnown RBP10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 MBD4O95243 580 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 MX1P20591 662 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 PSMC4P43686 418 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 HMGCS2P54868 508 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 BACE1P56817 501 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 HDAC1Q13547 482 aaPredicted RBP10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 RAB3GAP1Q15042 981 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 SLC4A8Q2Y0W8 1093 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 SLC9C1Q4G0N8 1177 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 USP17L2Q6R6M4 530 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 C17orf99Q6UX52 265 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 METTL16Q86W50 562 aaKnown RBP10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 KBTBD3Q8NAB2 608 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 RAET1EQ8TD07 263 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 GTF3C2Q8WUA4 911 aaPredicted RBP10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 COA7Q96BR5 231 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 ARMT1Q9H993 441 aa10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 CWC22Q9HCG8 908 aaKnown RBP10.05□□□□□ -0.8
TSPAN1-205ENST00000472170 DOCK1Q14185 1865 aa10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 LAMB1P07942 1786 aa10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 GDF11O95390 407 aa10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 SLC3A2P08195 630 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 EDC3Q96F86 508 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 TRIM47Q96LD4 638 aa10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 CCDC17Q96LX7 622 aa10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 RIOK1Q9BRS2 568 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 FSD1Q9BTV5 496 aa10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 SH2D4AQ9H788 454 aa10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 DCP1AQ9NPI6 582 aaPredicted RBP10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 BIN2Q9UBW5 565 aaPredicted RBP10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 ZBTB21Q9ULJ3 1066 aa10.04□□□□□ -0.8
TSPAN1-205ENST00000472170 TCRBV5S4A2TA0A5A2 114 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 GH2P01242 217 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 CYP2C8P10632 490 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 UBXN2AP68543 259 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 MTMR2Q13614 643 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 SH3D19Q5HYK7 790 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 GPAT2Q6NUI2 795 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 TATDN1Q6P1N9 297 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 LCORLQ8N3X6 602 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 SDR42E1Q8WUS8 393 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 APPBP2Q92624 585 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 MKNK2Q9HBH9 465 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 ARHGEF10LQ9HCE6 1279 aa10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 SUPT16HQ9Y5B9 1047 aaKnown RBP10.03□□□□□ -0.8
TSPAN1-205ENST00000472170 USP17L12C9JPN9 530 aa10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L21D6R901 530 aa10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 TNPO2O14787 897 aaKnown RBP10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 ECM2O94769 699 aaPredicted RBP10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 HOXA7P31268 230 aaPredicted RBP10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 PLCD1P51178 756 aa10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 CCNA1P78396 465 aa10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 GIMAP6Q6P9H5 292 aa10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 TMEM179Q6ZVK1 233 aa10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 TICAM2Q86XR7 235 aa10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 ZNF444Q8N0Y2 327 aaPredicted RBP10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 EVI5LQ96CN4 794 aa10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 ARPP21Q9UBL0 812 aaPredicted RBP10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 FOCADQ5VW36 1801 aa10.02□□□□□ -0.81
TSPAN1-205ENST00000472170 MINDY4BA8MYZ0 360 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 TRIM6-TRIM34B2RNG4 842 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L15C9J2P7 530 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 PATL2C9JE40 543 aaKnown RBP10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L13C9JLJ4 530 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L11C9JVI0 530 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L18D6R9N7 530 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L22D6RA61 530 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L17D6RBQ6 530 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L19D6RCP7 530 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L20D6RJB6 530 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 TDO2P48775 406 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 SOX10P56693 466 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 USP17L24Q0WX57 530 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 FAM110CQ1W6H9 321 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 B4GALNT3Q6L9W6 998 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 CCDC84Q86UT8 332 aaPredicted RBP10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 ANKRD13CQ8N6S4 541 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 GPRC5AQ8NFJ5 357 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 STRBPQ96SI9 672 aaKnown RBP10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 PUS7LQ9H0K6 701 aaKnown RBP10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 HOXC10Q9NYD6 342 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 SRRDQ9UH36 339 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 CDK5RAP2Q96SN8 1893 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 MYH7P12883 1935 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 MYPNQ86TC9 1320 aa10.01□□□□□ -0.81
TSPAN1-205ENST00000472170 ATAD5Q96QE3 1844 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 BCRP11274 1271 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 CAPN2P17655 700 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 MFAP1P55081 439 aaKnown RBP10□□□□□ -0.81
TSPAN1-205ENST00000472170 PDE4BQ07343 736 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 MOGSQ13724 837 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 PPP4R3BQ5MIZ7 849 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms