RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CERKLQ49MI3 558 aaPredicted RBP11.01□□□□□ -0.65
SYN3-211ENST00000472027 GADL1Q6ZQY3 521 aa11.01□□□□□ -0.65
SYN3-211ENST00000472027 ABHD8Q96I13 439 aa11.01□□□□□ -0.65
SYN3-211ENST00000472027 FSD1Q9BTV5 496 aa11.01□□□□□ -0.65
SYN3-211ENST00000472027 CDK5RAP2Q96SN8 1893 aa11□□□□□ -0.65
SYN3-211ENST00000472027 USP17L12C9JPN9 530 aa11□□□□□ -0.65
SYN3-211ENST00000472027 USP17L21D6R901 530 aa11□□□□□ -0.65
SYN3-211ENST00000472027 M0R2C6 588 aa11□□□□□ -0.65
SYN3-211ENST00000472027 CAPN15O75808 1086 aa11□□□□□ -0.65
SYN3-211ENST00000472027 GH2P01242 217 aa11□□□□□ -0.65
SYN3-211ENST00000472027 SHMT1P34896 483 aa11□□□□□ -0.65
SYN3-211ENST00000472027 C12orf60Q5U649 245 aa11□□□□□ -0.65
SYN3-211ENST00000472027 CD99L2Q8TCZ2 262 aa11□□□□□ -0.65
SYN3-211ENST00000472027 EVI5LQ96CN4 794 aa11□□□□□ -0.65
SYN3-211ENST00000472027 ERO1AQ96HE7 468 aa11□□□□□ -0.65
SYN3-211ENST00000472027 DDRGK1Q96HY6 314 aa11□□□□□ -0.65
SYN3-211ENST00000472027 SEC62Q99442 399 aaKnown RBP11□□□□□ -0.65
SYN3-211ENST00000472027 WDR18Q9BV38 432 aa11□□□□□ -0.65
SYN3-211ENST00000472027 ZBTB21Q9ULJ3 1066 aa11□□□□□ -0.65
SYN3-211ENST00000472027 SIPA1L1O43166 1804 aa11□□□□□ -0.65
SYN3-211ENST00000472027 CYP2D7A0A087X1C5 515 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 GSG1L2A8MUP6 293 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 PATL2C9JE40 543 aaKnown RBP10.99□□□□□ -0.65
SYN3-211ENST00000472027 SMIM22K7EJ46 135 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 GPAA1O43292 621 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 CYP2C8P10632 490 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 PKN2Q16513 984 aaKnown RBP10.99□□□□□ -0.65
SYN3-211ENST00000472027 ABCB5Q2M3G0 1257 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 SH3D19Q5HYK7 790 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 ZMYM1Q5SVZ6 1142 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 CTR9Q6PD62 1173 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 C17orf99Q6UX52 265 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 PLEKHM2Q8IWE5 1019 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 AMOTL1Q8IY63 956 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
SYN3-211ENST00000472027 DYNLL2Q96FJ2 89 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 OSBPL3Q9H4L5 887 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 CABP5Q9NP86 173 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 SWAP70Q9UH65 585 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 CPA4Q9UI42 421 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 AGTPBP1Q9UPW5 1226 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 SLC45A1Q9Y2W3 748 aa10.99□□□□□ -0.65
SYN3-211ENST00000472027 DOCK1Q14185 1865 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 MYH1P12882 1939 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 C19orf81C9J6K1 198 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 USP17L10C9JJH3 530 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 GNAT2P19087 354 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 HMGCS2P54868 508 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 BACE1P56817 501 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 CAP1Q01518 475 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 MTMR2Q13614 643 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 RAB3GAP1Q15042 981 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 TREML2Q5T2D2 321 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 GIMAP6Q6P9H5 292 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 OTOP1Q7RTM1 612 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 SLC44A5Q8NCS7 719 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 PARK7Q99497 189 aaKnown RBP10.98□□□□□ -0.65
SYN3-211ENST00000472027 TAOK2Q9UL54 1235 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 TRIM17Q9Y577 477 aa10.98□□□□□ -0.65
SYN3-211ENST00000472027 TRIM6-TRIM34B2RNG4 842 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 MPHOSPH10O00566 681 aaKnown RBP10.97□□□□□ -0.65
SYN3-211ENST00000472027 APPP05067 770 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 GUCY1A2P33402 732 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 CDK8P49336 464 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 SBK1Q52WX2 424 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 IFNL3Q8IZI9 196 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 RILPL2Q969X0 211 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 EFCC1Q9HA90 598 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 TMOD4Q9NZQ9 345 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
SYN3-211ENST00000472027 PHIPQ8WWQ0 1821 aa10.97□□□□□ -0.65
SYN3-211ENST00000472027 ADGRA2Q96PE1 1338 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 CCDC85CA6NKD9 419 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 MINDY4BA8MYZ0 360 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 OSBPP22059 807 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 TDO2P48775 406 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 LACTBP83111 547 aaPredicted RBP10.96□□□□□ -0.65
SYN3-211ENST00000472027 PABPC4Q13310 644 aaKnown RBP eCLIP10.96□□□□□ -0.65
SYN3-211ENST00000472027 KIF22Q14807 665 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 SEPT2Q15019 361 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 ARHGEF6Q15052 776 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 FBXO46Q6PJ61 603 aaPredicted RBP10.96□□□□□ -0.65
SYN3-211ENST00000472027 C16orf86Q6ZW13 317 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 TICAM2Q86XR7 235 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 EPB41L4AQ9HCS5 686 aaPredicted RBP10.96□□□□□ -0.65
SYN3-211ENST00000472027 EMILIN3Q9NT22 766 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 PNMA3Q9UL41 463 aa10.96□□□□□ -0.65
SYN3-211ENST00000472027 DDX60LQ5H9U9 1706 aaKnown RBP10.95□□□□□ -0.66
SYN3-211ENST00000472027 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
SYN3-211ENST00000472027 BCRP11274 1271 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 AKR1B1P15121 316 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 PDE4AP27815 886 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 HOXA7P31268 230 aaPredicted RBP10.95□□□□□ -0.66
SYN3-211ENST00000472027 ZYXQ15942 572 aaKnown RBP10.95□□□□□ -0.66
SYN3-211ENST00000472027 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 TMEM179Q6ZVK1 233 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 STK11IPQ8N1F8 1099 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 ACER1Q8TDN7 264 aa10.95□□□□□ -0.66
SYN3-211ENST00000472027 SMCR8Q8TEV9 937 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms