RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 RBPJLQ9UBG7 517 aa24.43■■□□□ 1.5
CCDC78-208ENST00000471861 FRMPD3Q5JV73 1810 aa24.42■■□□□ 1.5
CCDC78-208ENST00000471861 MAST2Q6P0Q8 1798 aa24.42■■□□□ 1.5
CCDC78-208ENST00000471861 SRGAP3O43295 1099 aa24.42■■□□□ 1.5
CCDC78-208ENST00000471861 ZKSCAN1P17029 563 aaPredicted RBP24.42■■□□□ 1.5
CCDC78-208ENST00000471861 MTX1Q13505 466 aa24.42■■□□□ 1.5
CCDC78-208ENST00000471861 Q3C1V9 767 aa24.42■■□□□ 1.5
CCDC78-208ENST00000471861 GPRC5AQ8NFJ5 357 aa24.42■■□□□ 1.5
CCDC78-208ENST00000471861 NEUROD6Q96NK8 337 aa24.42■■□□□ 1.5
CCDC78-208ENST00000471861 CDK5RAP2Q96SN8 1893 aa24.41■■□□□ 1.5
CCDC78-208ENST00000471861 MORN1Q5T089 497 aa24.41■■□□□ 1.5
CCDC78-208ENST00000471861 TMOD4Q9NZQ9 345 aa24.41■■□□□ 1.5
CCDC78-208ENST00000471861 PI4KBQ9UBF8 816 aa24.41■■□□□ 1.5
CCDC78-208ENST00000471861 ASNSP08243 561 aa24.4■■□□□ 1.5
CCDC78-208ENST00000471861 ERVK-9P63128 1117 aa24.4■■□□□ 1.5
CCDC78-208ENST00000471861 ERVK-24P63145 666 aa24.4■■□□□ 1.5
CCDC78-208ENST00000471861 MDM2Q00987 491 aaPredicted RBP24.4■■□□□ 1.5
CCDC78-208ENST00000471861 GPR142Q7Z601 462 aa24.4■■□□□ 1.5
CCDC78-208ENST00000471861 METTL16Q86W50 562 aaKnown RBP24.4■■□□□ 1.5
CCDC78-208ENST00000471861 COL25A1Q9BXS0 654 aaPredicted RBP24.4■■□□□ 1.5
CCDC78-208ENST00000471861 API5Q9BZZ5 524 aaKnown RBP24.4■■□□□ 1.5
CCDC78-208ENST00000471861 HDAC5Q9UQL6 1122 aa24.4■■□□□ 1.5
CCDC78-208ENST00000471861 DNAH12Q6ZR08 3092 aa24.4■■□□□ 1.5
CCDC78-208ENST00000471861 FOCADQ5VW36 1801 aa24.4■■□□□ 1.5
CCDC78-208ENST00000471861 GDF11O95390 407 aa24.39■■□□□ 1.49
CCDC78-208ENST00000471861 MAPK4P31152 587 aa24.39■■□□□ 1.49
CCDC78-208ENST00000471861 ADGRA1Q86SQ6 560 aa24.39■■□□□ 1.49
CCDC78-208ENST00000471861 TRMT2AQ8IZ69 625 aaKnown RBP24.39■■□□□ 1.49
CCDC78-208ENST00000471861 AATFQ9NY61 560 aaKnown RBP eCLIP24.39■■□□□ 1.49
CCDC78-208ENST00000471861 VCANP13611 3396 aa24.39■■□□□ 1.49
CCDC78-208ENST00000471861 EYSQ5T1H1 3165 aa24.39■■□□□ 1.49
CCDC78-208ENST00000471861 FLT1P17948 1338 aa24.38■■□□□ 1.49
CCDC78-208ENST00000471861 PDE3AQ14432 1141 aa24.38■■□□□ 1.49
CCDC78-208ENST00000471861 TRMT44Q8IYL2 757 aaKnown RBP24.38■■□□□ 1.49
CCDC78-208ENST00000471861 GUCD1Q96NT3 240 aa24.38■■□□□ 1.49
CCDC78-208ENST00000471861 APBA2Q99767 749 aa24.38■■□□□ 1.49
CCDC78-208ENST00000471861 DHX36Q9H2U1 1008 aaKnown RBP24.38■■□□□ 1.49
CCDC78-208ENST00000471861 ZBTB21Q9ULJ3 1066 aa24.38■■□□□ 1.49
CCDC78-208ENST00000471861 C19orf81C9J6K1 198 aa24.37■■□□□ 1.49
CCDC78-208ENST00000471861 USP17L10C9JJH3 530 aa24.37■■□□□ 1.49
CCDC78-208ENST00000471861 RGS2P41220 211 aa24.37■■□□□ 1.49
CCDC78-208ENST00000471861 MAPKAPK5Q8IW41 473 aa24.37■■□□□ 1.49
CCDC78-208ENST00000471861 PAGR1Q9BTK6 254 aa24.37■■□□□ 1.49
CCDC78-208ENST00000471861 EMILIN3Q9NT22 766 aa24.37■■□□□ 1.49
CCDC78-208ENST00000471861 POTEB2H3BUK9 544 aa24.36■■□□□ 1.49
CCDC78-208ENST00000471861 GORABQ5T7V8 394 aa24.36■■□□□ 1.49
CCDC78-208ENST00000471861 PLEKHH3Q7Z736 793 aa24.36■■□□□ 1.49
CCDC78-208ENST00000471861 TGFBRAP1Q8WUH2 860 aa24.36■■□□□ 1.49
CCDC78-208ENST00000471861 LRP2BPQ9P2M1 347 aa24.36■■□□□ 1.49
CCDC78-208ENST00000471861 PALD1Q9ULE6 856 aa24.36■■□□□ 1.49
CCDC78-208ENST00000471861 CNMDO75829 334 aa24.35■■□□□ 1.49
CCDC78-208ENST00000471861 FLRT1Q9NZU1 646 aa24.35■■□□□ 1.49
CCDC78-208ENST00000471861 SPTBN5Q9NRC6 3674 aaKnown RBP24.34■■□□□ 1.49
CCDC78-208ENST00000471861 PPP4CP60510 307 aa24.34■■□□□ 1.49
CCDC78-208ENST00000471861 NAA16Q6N069 864 aaPredicted RBP24.34■■□□□ 1.49
CCDC78-208ENST00000471861 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.34■■□□□ 1.49
CCDC78-208ENST00000471861 PNMA6EA0A0J9YXQ4 647 aa24.33■■□□□ 1.49
CCDC78-208ENST00000471861 GNAI3P08754 354 aa24.33■■□□□ 1.49
CCDC78-208ENST00000471861 GTF3C2Q8WUA4 911 aaPredicted RBP24.33■■□□□ 1.49
CCDC78-208ENST00000471861 SNRKQ9NRH2 765 aa24.33■■□□□ 1.49
CCDC78-208ENST00000471861 GINM1Q9NU53 330 aa24.33■■□□□ 1.49
CCDC78-208ENST00000471861 LTBP2Q14767 1821 aa24.33■■□□□ 1.48
CCDC78-208ENST00000471861 CT47B1P0C2W7 299 aaPredicted RBP24.32■■□□□ 1.48
CCDC78-208ENST00000471861 UQCRFS1P1P0C7P4 283 aa24.32■■□□□ 1.48
CCDC78-208ENST00000471861 MAP2K5Q13163 448 aa24.32■■□□□ 1.48
CCDC78-208ENST00000471861 FAM109BQ6ICB4 259 aaPredicted RBP24.32■■□□□ 1.48
CCDC78-208ENST00000471861 FOXP4Q8IVH2 680 aaPredicted RBP24.32■■□□□ 1.48
CCDC78-208ENST00000471861 CRACR2BQ8N4Y2 399 aaPredicted RBP24.32■■□□□ 1.48
CCDC78-208ENST00000471861 NOL10Q9BSC4 688 aaKnown RBP24.32■■□□□ 1.48
CCDC78-208ENST00000471861 NDUFB9Q9Y6M9 179 aa24.32■■□□□ 1.48
CCDC78-208ENST00000471861 MYO5AQ9Y4I1 1855 aaKnown RBP24.32■■□□□ 1.48
CCDC78-208ENST00000471861 BAG3O95817 575 aa24.31■■□□□ 1.48
CCDC78-208ENST00000471861 PLCG2P16885 1265 aa24.31■■□□□ 1.48
CCDC78-208ENST00000471861 C12orf42Q96LP6 360 aa24.31■■□□□ 1.48
CCDC78-208ENST00000471861 FAM161BQ96MY7 647 aa24.31■■□□□ 1.48
CCDC78-208ENST00000471861 SAP30BPQ9UHR5 308 aaKnown RBP24.31■■□□□ 1.48
CCDC78-208ENST00000471861 CYP2E1P05181 493 aaPredicted RBP24.3■■□□□ 1.48
CCDC78-208ENST00000471861 USP17L2Q6R6M4 530 aa24.3■■□□□ 1.48
CCDC78-208ENST00000471861 CCAR1Q8IX12 1150 aaKnown RBP24.3■■□□□ 1.48
CCDC78-208ENST00000471861 SENP6Q9GZR1 1112 aaPredicted RBP24.3■■□□□ 1.48
CCDC78-208ENST00000471861 CDH23Q9H251 3354 aa24.3■■□□□ 1.48
CCDC78-208ENST00000471861 GH2P01242 217 aa24.29■■□□□ 1.48
CCDC78-208ENST00000471861 RARSP54136 660 aaKnown RBP24.29■■□□□ 1.48
CCDC78-208ENST00000471861 ZYXQ15942 572 aaKnown RBP24.29■■□□□ 1.48
CCDC78-208ENST00000471861 TRIM34Q9BYJ4 488 aa24.29■■□□□ 1.48
CCDC78-208ENST00000471861 TNNQ9UQP3 1299 aa24.29■■□□□ 1.48
CCDC78-208ENST00000471861 RABGAP1Q9Y3P9 1069 aa24.29■■□□□ 1.48
CCDC78-208ENST00000471861 ZNF316A6NFI3 1004 aaPredicted RBP24.28■■□□□ 1.48
CCDC78-208ENST00000471861 DYNLL1P63167 89 aaKnown RBP24.28■■□□□ 1.48
CCDC78-208ENST00000471861 TRPV1Q8NER1 839 aa24.28■■□□□ 1.48
CCDC78-208ENST00000471861 EDC3Q96F86 508 aaKnown RBP24.28■■□□□ 1.48
CCDC78-208ENST00000471861 DBNDD2Q9BQY9 259 aa24.28■■□□□ 1.48
CCDC78-208ENST00000471861 DDX20Q9UHI6 824 aaKnown RBP24.28■■□□□ 1.48
CCDC78-208ENST00000471861 IGHA2P01877 340 aa24.27■■□□□ 1.48
CCDC78-208ENST00000471861 ATN1P54259 1190 aaPredicted RBP24.27■■□□□ 1.48
CCDC78-208ENST00000471861 NPLOC4Q8TAT6 608 aa24.27■■□□□ 1.48
CCDC78-208ENST00000471861 ARHGAP45Q92619 1136 aa24.27■■□□□ 1.48
CCDC78-208ENST00000471861 PIH1D3Q9NQM4 214 aaKnown RBP24.27■■□□□ 1.48
CCDC78-208ENST00000471861 BTBD7Q9P203 1132 aa24.27■■□□□ 1.48
CCDC78-208ENST00000471861 HLA-DOAP06340 250 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms