RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PPP2R3BQ9Y5P8 575 aa20.52■□□□□ 0.88
HSPG2-208ENST00000471322 SSC5DA1L4H1 1573 aa20.52■□□□□ 0.87
HSPG2-208ENST00000471322 PRKAB2O43741 272 aa20.51■□□□□ 0.87
HSPG2-208ENST00000471322 STX6O43752 255 aa20.51■□□□□ 0.87
HSPG2-208ENST00000471322 WDHD1O75717 1129 aaPredicted RBP20.51■□□□□ 0.87
HSPG2-208ENST00000471322 SYT1P21579 422 aa20.51■□□□□ 0.87
HSPG2-208ENST00000471322 CYP4F22Q6NT55 531 aa20.51■□□□□ 0.87
HSPG2-208ENST00000471322 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
HSPG2-208ENST00000471322 NBPF3Q9H094 633 aa20.51■□□□□ 0.87
HSPG2-208ENST00000471322 AKNAD1Q5T1N1 836 aa20.5■□□□□ 0.87
HSPG2-208ENST00000471322 CERS3Q8IU89 383 aa20.5■□□□□ 0.87
HSPG2-208ENST00000471322 TBC1D10CQ8IV04 446 aa20.5■□□□□ 0.87
HSPG2-208ENST00000471322 TEX11Q8IYF3 940 aa20.5■□□□□ 0.87
HSPG2-208ENST00000471322 CRNKL1Q9BZJ0 848 aaKnown RBP20.5■□□□□ 0.87
HSPG2-208ENST00000471322 ATP6V1DQ9Y5K8 247 aa20.5■□□□□ 0.87
HSPG2-208ENST00000471322 MAST2Q6P0Q8 1798 aa20.5■□□□□ 0.87
HSPG2-208ENST00000471322 TRAK2O60296 914 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 STK3Q13188 491 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 SUPT20HL1Q3ZLR7 823 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 FKBP1CQ5VVH2 108 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 MFSD6Q6ZSS7 791 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 FAM83AQ86UY5 434 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 STAG1Q8WVM7 1258 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 KLRG1Q96E93 195 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 TMEM87BQ96K49 555 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 ANAPC4Q9UJX5 808 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 ANGEL1Q9UNK9 670 aaKnown RBP20.49■□□□□ 0.87
HSPG2-208ENST00000471322 RASSF10A6NK89 507 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 BAG3O95817 575 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 ZSCAN22P10073 491 aaPredicted RBP20.49■□□□□ 0.87
HSPG2-208ENST00000471322 VEGFBP49765 207 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 APOBRQ0VD83 1088 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 MIGA2Q7L4E1 593 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 ZSCAN29Q8IWY8 852 aaPredicted RBP20.49■□□□□ 0.87
HSPG2-208ENST00000471322 FAM151AQ8WW52 585 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 KIF3AQ9Y496 699 aa20.49■□□□□ 0.87
HSPG2-208ENST00000471322 DHX16O60231 1041 aaKnown RBP20.48■□□□□ 0.87
HSPG2-208ENST00000471322 SLURP2P0DP57 97 aa20.48■□□□□ 0.87
HSPG2-208ENST00000471322 PCP11498 1178 aaKnown RBP20.48■□□□□ 0.87
HSPG2-208ENST00000471322 PDIA3P30101 505 aaKnown RBP20.48■□□□□ 0.87
HSPG2-208ENST00000471322 LARP1BQ659C4 914 aaKnown RBP20.48■□□□□ 0.87
HSPG2-208ENST00000471322 CHST3Q7LGC8 479 aa20.48■□□□□ 0.87
HSPG2-208ENST00000471322 MTA3Q9BTC8 594 aa20.48■□□□□ 0.87
HSPG2-208ENST00000471322 IDI2Q9BXS1 227 aa20.48■□□□□ 0.87
HSPG2-208ENST00000471322 ATP8A2Q9NTI2 1148 aa20.48■□□□□ 0.87
HSPG2-208ENST00000471322 ANTXR2P58335 489 aa20.47■□□□□ 0.87
HSPG2-208ENST00000471322 HMGN5P82970 282 aaKnown RBP20.47■□□□□ 0.87
HSPG2-208ENST00000471322 PPARAQ07869 468 aa20.47■□□□□ 0.87
HSPG2-208ENST00000471322 TGFBRAP1Q8WUH2 860 aa20.47■□□□□ 0.87
HSPG2-208ENST00000471322 PPP1R12BO60237 982 aaPredicted RBP20.46■□□□□ 0.87
HSPG2-208ENST00000471322 ZNF157P51786 506 aaPredicted RBP20.46■□□□□ 0.87
HSPG2-208ENST00000471322 SCRN1Q12765 414 aa20.46■□□□□ 0.87
HSPG2-208ENST00000471322 SLC4A8Q2Y0W8 1093 aa20.46■□□□□ 0.87
HSPG2-208ENST00000471322 MCTP1Q6DN14 999 aa20.46■□□□□ 0.87
HSPG2-208ENST00000471322 SH3BP5LQ7L8J4 393 aa20.46■□□□□ 0.87
HSPG2-208ENST00000471322 MAPKAPK5Q8IW41 473 aa20.46■□□□□ 0.87
HSPG2-208ENST00000471322 CAPNS2Q96L46 248 aa20.46■□□□□ 0.87
HSPG2-208ENST00000471322 DDTLA6NHG4 134 aaPredicted RBP20.45■□□□□ 0.87
HSPG2-208ENST00000471322 PPP4CP60510 307 aa20.45■□□□□ 0.87
HSPG2-208ENST00000471322 ARMC9Q7Z3E5 817 aa20.45■□□□□ 0.87
HSPG2-208ENST00000471322 SDR42E1Q8WUS8 393 aa20.45■□□□□ 0.87
HSPG2-208ENST00000471322 PAPPA2Q9BXP8 1791 aa20.45■□□□□ 0.86
HSPG2-208ENST00000471322 B4E1Z4 1266 aa20.45■□□□□ 0.86
HSPG2-208ENST00000471322 AOC2O75106 756 aa20.45■□□□□ 0.86
HSPG2-208ENST00000471322 USP2O75604 605 aaPredicted RBP20.45■□□□□ 0.86
HSPG2-208ENST00000471322 FKBP1BP68106 108 aa20.45■□□□□ 0.86
HSPG2-208ENST00000471322 CTDSPL2Q05D32 466 aa20.45■□□□□ 0.86
HSPG2-208ENST00000471322 SART3Q15020 963 aaKnown RBP20.45■□□□□ 0.86
HSPG2-208ENST00000471322 FOXD4L5Q5VV16 416 aaPredicted RBP20.45■□□□□ 0.86
HSPG2-208ENST00000471322 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
HSPG2-208ENST00000471322 FOXD4L4Q8WXT5 416 aaPredicted RBP20.45■□□□□ 0.86
HSPG2-208ENST00000471322 CLMNQ96JQ2 1002 aa20.45■□□□□ 0.86
HSPG2-208ENST00000471322 CSRNP1Q96S65 589 aa20.45■□□□□ 0.86
HSPG2-208ENST00000471322 SH2B2O14492 632 aaPredicted RBP20.44■□□□□ 0.86
HSPG2-208ENST00000471322 ENTPD3O75355 529 aa20.44■□□□□ 0.86
HSPG2-208ENST00000471322 PLCG2P16885 1265 aa20.44■□□□□ 0.86
HSPG2-208ENST00000471322 NT5C2P49902 561 aa20.44■□□□□ 0.86
HSPG2-208ENST00000471322 MKRN3Q13064 507 aaKnown RBP20.44■□□□□ 0.86
HSPG2-208ENST00000471322 GSE1Q14687 1217 aa20.44■□□□□ 0.86
HSPG2-208ENST00000471322 RGMBQ6NW40 437 aa20.44■□□□□ 0.86
HSPG2-208ENST00000471322 CYB5R4Q7L1T6 521 aa20.44■□□□□ 0.86
HSPG2-208ENST00000471322 SAP30BPQ9UHR5 308 aaKnown RBP20.44■□□□□ 0.86
HSPG2-208ENST00000471322 NAP1L2Q9ULW6 460 aaPredicted RBP20.44■□□□□ 0.86
HSPG2-208ENST00000471322 MTMR6Q9Y217 621 aa20.44■□□□□ 0.86
HSPG2-208ENST00000471322 NEDD4P46934 1319 aa20.44■□□□□ 0.86
HSPG2-208ENST00000471322 KLF18A0A0U1RQI7 1052 aa20.43■□□□□ 0.86
HSPG2-208ENST00000471322 MINDY4BA8MYZ0 360 aa20.43■□□□□ 0.86
HSPG2-208ENST00000471322 F13A1P00488 732 aa20.43■□□□□ 0.86
HSPG2-208ENST00000471322 SLC3A2P08195 630 aaKnown RBP20.43■□□□□ 0.86
HSPG2-208ENST00000471322 LIFRP42702 1097 aa20.43■□□□□ 0.86
HSPG2-208ENST00000471322 TMTC2Q8N394 836 aa20.43■□□□□ 0.86
HSPG2-208ENST00000471322 FAM184AQ8NB25 1140 aa20.43■□□□□ 0.86
HSPG2-208ENST00000471322 LAMA4Q16363 1823 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 SBK1Q52WX2 424 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 SGMS1Q86VZ5 419 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 IGDCC4Q8TDY8 1250 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 ZIC5Q96T25 663 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 OSBPL5Q9H0X9 879 aaPredicted RBP20.42■□□□□ 0.86
HSPG2-208ENST00000471322 ZSWIM5Q9P217 1185 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 FLT1P17948 1338 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms