RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 NECTIN1Q15223 517 aa7.6□□□□□ -1.19
CHD6-206ENST00000470470 CHRNA2Q15822 529 aa7.6□□□□□ -1.19
CHD6-206ENST00000470470 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
CHD6-206ENST00000470470 ZGPATQ8N5A5 531 aaKnown RBP7.6□□□□□ -1.19
CHD6-206ENST00000470470 ZSCAN31Q96LW9 406 aaPredicted RBP7.6□□□□□ -1.19
CHD6-206ENST00000470470 MYD88Q99836 296 aa7.6□□□□□ -1.19
CHD6-206ENST00000470470 IL25Q9H293 177 aa7.6□□□□□ -1.19
CHD6-206ENST00000470470 GRPEL1Q9HAV7 217 aa7.6□□□□□ -1.19
CHD6-206ENST00000470470 GPR108Q9NPR9 543 aa7.6□□□□□ -1.19
CHD6-206ENST00000470470 DIAPH3Q9NSV4 1193 aa7.6□□□□□ -1.19
CHD6-206ENST00000470470 SPEF2Q9C093 1822 aa7.6□□□□□ -1.19
CHD6-206ENST00000470470 IL2RBP14784 551 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 CHRNA4P43681 627 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 CTBSQ01459 385 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 PTPN12Q05209 780 aaKnown RBP7.59□□□□□ -1.19
CHD6-206ENST00000470470 TRIM28Q13263 835 aaKnown RBP7.59□□□□□ -1.19
CHD6-206ENST00000470470 EPHA10Q5JZY3 1008 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 VPS53Q5VIR6 699 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 AACSQ86V21 672 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 C1orf216Q8TAB5 229 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 MAP4K1Q92918 833 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 CDCA7Q9BWT1 371 aaPredicted RBP7.59□□□□□ -1.19
CHD6-206ENST00000470470 AVENQ9NQS1 362 aaPredicted RBP7.59□□□□□ -1.19
CHD6-206ENST00000470470 ATG3Q9NT62 314 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 LIMCH1Q9UPQ0 1083 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 PA2G4Q9UQ80 394 aaKnown RBP7.59□□□□□ -1.19
CHD6-206ENST00000470470 TCHHQ07283 1943 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 TJP1Q07157 1748 aa7.59□□□□□ -1.19
CHD6-206ENST00000470470 CCDC171Q6TFL3 1326 aa7.58□□□□□ -1.2
CHD6-206ENST00000470470 WDR33Q9C0J8 1336 aaKnown RBP7.58□□□□□ -1.2
CHD6-206ENST00000470470 MBD3O95983 291 aa7.58□□□□□ -1.2
CHD6-206ENST00000470470 MYL6BP14649 208 aa7.58□□□□□ -1.2
CHD6-206ENST00000470470 GTF2IP78347 998 aa7.58□□□□□ -1.2
CHD6-206ENST00000470470 CCDC191Q8NCU4 936 aa7.58□□□□□ -1.2
CHD6-206ENST00000470470 TEX13AQ9BXU3 409 aaPredicted RBP7.58□□□□□ -1.2
CHD6-206ENST00000470470 PRDM11Q9NQV5 511 aa7.58□□□□□ -1.2
CHD6-206ENST00000470470 SH2B1Q9NRF2 756 aaPredicted RBP7.58□□□□□ -1.2
CHD6-206ENST00000470470 DNAAF2Q9NVR5 837 aaKnown RBP7.58□□□□□ -1.2
CHD6-206ENST00000470470 DDX49Q9Y6V7 483 aaKnown RBP7.58□□□□□ -1.2
CHD6-206ENST00000470470 ITGB4P16144 1822 aa7.58□□□□□ -1.2
CHD6-206ENST00000470470 MED23Q9ULK4 1368 aa7.58□□□□□ -1.2
CHD6-206ENST00000470470 A0A087WZG4 1122 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 SCO2A0A1W2PP80 73 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 FAM196BA6NMK8 535 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 MAP4K4O95819 1239 aaPredicted RBP7.57□□□□□ -1.2
CHD6-206ENST00000470470 FOXO4P98177 505 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 PTH1RQ03431 593 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 PKP1Q13835 747 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 TNNI3KQ59H18 835 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 FAM182BQ5T319 152 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 USPL1Q5W0Q7 1092 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 MCTP1Q6DN14 999 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 CWC27Q6UX04 472 aaKnown RBP7.57□□□□□ -1.2
CHD6-206ENST00000470470 TOM1L2Q6ZVM7 507 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 CHSY3Q70JA7 882 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 NLRP8Q86W28 1048 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 OGFOD1Q8N543 542 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 TMEM87AQ8NBN3 555 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 GZF1Q9H116 711 aaPredicted RBP7.57□□□□□ -1.2
CHD6-206ENST00000470470 HMG20BQ9P0W2 317 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.57□□□□□ -1.2
CHD6-206ENST00000470470 PCDHGC4Q9Y5F7 938 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 FPGT-TNNI3KV9GXZ4 949 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 LRP6O75581 1613 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 COL14A1Q05707 1796 aaKnown RBP7.57□□□□□ -1.2
CHD6-206ENST00000470470 TOGARAM1Q9Y4F4 1720 aa7.57□□□□□ -1.2
CHD6-206ENST00000470470 RPAP1Q9BWH6 1393 aaPredicted RBP7.57□□□□□ -1.2
CHD6-206ENST00000470470 USP17L15C9J2P7 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L13C9JLJ4 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L12C9JPN9 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L11C9JVI0 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L21D6R901 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L18D6R9N7 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L22D6RA61 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L17D6RBQ6 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L19D6RCP7 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L20D6RJB6 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 CIAO1O76071 339 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 ATG7O95352 703 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 ZKSCAN1P17029 563 aaPredicted RBP7.56□□□□□ -1.2
CHD6-206ENST00000470470 PSMA5P28066 241 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 ADH6P28332 368 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 HSPA2P54652 639 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 AK2P54819 239 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 TLR1Q15399 786 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 RUFY3Q7L099 469 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 GAS2L3Q86XJ1 694 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 LARGE2Q8N3Y3 721 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHD6-206ENST00000470470 PPP1R9BQ96SB3 815 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 HAUS7Q99871 368 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 ISCA1Q9BUE6 129 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 UPF3BQ9BZI7 483 aaKnown RBP7.56□□□□□ -1.2
CHD6-206ENST00000470470 CCDC8Q9H0W5 538 aaPredicted RBP7.56□□□□□ -1.2
CHD6-206ENST00000470470 CWC25Q9NXE8 425 aaPredicted RBP7.56□□□□□ -1.2
CHD6-206ENST00000470470 CYP46A1Q9Y6A2 500 aa7.56□□□□□ -1.2
CHD6-206ENST00000470470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.56□□□□□ -1.2
CHD6-206ENST00000470470 PLCH1Q4KWH8 1693 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms