RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 FAM110CQ1W6H9 321 aa38.08■■■■□ 3.69
HMG20B-209ENST00000470356 PPIL4Q8WUA2 492 aaKnown RBP eCLIP38.08■■■■□ 3.69
HMG20B-209ENST00000470356 GCLCP48506 637 aaPredicted RBP38.07■■■■□ 3.68
HMG20B-209ENST00000470356 TNPO2O14787 897 aaKnown RBP38.06■■■■□ 3.68
HMG20B-209ENST00000470356 MTMR2Q13614 643 aa38.06■■■■□ 3.68
HMG20B-209ENST00000470356 SLAIN1Q8ND83 568 aa38.06■■■■□ 3.68
HMG20B-209ENST00000470356 ASCC2Q9H1I8 757 aaPredicted RBP38.06■■■■□ 3.68
HMG20B-209ENST00000470356 ZBTB21Q9ULJ3 1066 aa38.06■■■■□ 3.68
HMG20B-209ENST00000470356 C19orf81C9J6K1 198 aa38.05■■■■□ 3.68
HMG20B-209ENST00000470356 GDF11O95390 407 aa38.05■■■■□ 3.68
HMG20B-209ENST00000470356 PDE3AQ14432 1141 aa38.05■■■■□ 3.68
HMG20B-209ENST00000470356 RIOK1Q9BRS2 568 aaKnown RBP38.05■■■■□ 3.68
HMG20B-209ENST00000470356 FLT3LGP49771 235 aa38.04■■■■□ 3.68
HMG20B-209ENST00000470356 SHROOM1Q2M3G4 852 aaPredicted RBP38.04■■■■□ 3.68
HMG20B-209ENST00000470356 EHD4Q9H223 541 aa38.04■■■■□ 3.68
HMG20B-209ENST00000470356 TMOD4Q9NZQ9 345 aa38.04■■■■□ 3.68
HMG20B-209ENST00000470356 BIN2Q9UBW5 565 aaPredicted RBP38.04■■■■□ 3.68
HMG20B-209ENST00000470356 CEP290O15078 2479 aa38.04■■■■□ 3.68
HMG20B-209ENST00000470356 SLC9C2Q5TAH2 1124 aa38.03■■■■□ 3.68
HMG20B-209ENST00000470356 TATDN1Q6P1N9 297 aa38.03■■■■□ 3.68
HMG20B-209ENST00000470356 SERPINB13Q9UIV8 391 aa38.03■■■■□ 3.68
HMG20B-209ENST00000470356 USP17L10C9JJH3 530 aa38.02■■■■□ 3.68
HMG20B-209ENST00000470356 ADCY3O60266 1144 aa38.02■■■■□ 3.68
HMG20B-209ENST00000470356 PDE6AP16499 860 aa38.02■■■■□ 3.68
HMG20B-209ENST00000470356 UBXN2AP68543 259 aa38.02■■■■□ 3.68
HMG20B-209ENST00000470356 IRF5Q13568 498 aa38.02■■■■□ 3.68
HMG20B-209ENST00000470356 TTC6Q86TZ1 520 aa38.02■■■■□ 3.68
HMG20B-209ENST00000470356 MAGEB6P1A0A0J9YX57 407 aa38.01■■■■□ 3.68
HMG20B-209ENST00000470356 CCL5P13501 91 aa38.01■■■■□ 3.68
HMG20B-209ENST00000470356 HOXA7P31268 230 aaPredicted RBP38.01■■■■□ 3.68
HMG20B-209ENST00000470356 COA7Q96BR5 231 aa38.01■■■■□ 3.68
HMG20B-209ENST00000470356 GOLIM4O00461 696 aa38■■■■□ 3.67
HMG20B-209ENST00000470356 C20orf194Q5TEA3 1177 aa38■■■■□ 3.67
HMG20B-209ENST00000470356 NKX2-3Q8TAU0 364 aa38■■■■□ 3.67
HMG20B-209ENST00000470356 PXYLP1Q8TE99 480 aa38■■■■□ 3.67
HMG20B-209ENST00000470356 DNAJC2Q99543 621 aaKnown RBP38■■■■□ 3.67
HMG20B-209ENST00000470356 GJB1P08034 283 aa37.99■■■■□ 3.67
HMG20B-209ENST00000470356 BCL11AQ9H165 835 aa37.99■■■■□ 3.67
HMG20B-209ENST00000470356 GH2P01242 217 aa37.98■■■■□ 3.67
HMG20B-209ENST00000470356 IRX3P78415 501 aaPredicted RBP37.98■■■■□ 3.67
HMG20B-209ENST00000470356 RNF208Q9H0X6 261 aa37.98■■■■□ 3.67
HMG20B-209ENST00000470356 ZNF532Q9HCE3 1301 aa37.97■■■■□ 3.67
HMG20B-209ENST00000470356 SHISA4Q96DD7 197 aa37.97■■■■□ 3.67
HMG20B-209ENST00000470356 MORF4L1Q9UBU8 362 aa37.97■■■■□ 3.67
HMG20B-209ENST00000470356 TCRBV5S4A2TA0A5A2 114 aa37.96■■■■□ 3.67
HMG20B-209ENST00000470356 GJA8P48165 433 aa37.96■■■■□ 3.67
HMG20B-209ENST00000470356 CRNKL1Q9BZJ0 848 aaKnown RBP37.96■■■■□ 3.67
HMG20B-209ENST00000470356 ELNP15502 786 aa37.95■■■■□ 3.67
HMG20B-209ENST00000470356 ATP5JP18859 108 aa37.95■■■■□ 3.67
HMG20B-209ENST00000470356 P2RX7Q99572 595 aaKnown RBP37.95■■■■□ 3.67
HMG20B-209ENST00000470356 PLCD1P51178 756 aa37.94■■■■□ 3.66
HMG20B-209ENST00000470356 CERKLQ49MI3 558 aaPredicted RBP37.94■■■■□ 3.66
HMG20B-209ENST00000470356 EDC3Q96F86 508 aaKnown RBP37.94■■■■□ 3.66
HMG20B-209ENST00000470356 EMILIN3Q9NT22 766 aa37.94■■■■□ 3.66
HMG20B-209ENST00000470356 PAG1Q9NWQ8 432 aa37.94■■■■□ 3.66
HMG20B-209ENST00000470356 DDX60LQ5H9U9 1706 aaKnown RBP37.94■■■■□ 3.66
HMG20B-209ENST00000470356 USP17L2Q6R6M4 530 aa37.93■■■■□ 3.66
HMG20B-209ENST00000470356 GCC1Q96CN9 775 aa37.93■■■■□ 3.66
HMG20B-209ENST00000470356 UNC93B1Q9H1C4 597 aa37.93■■■■□ 3.66
HMG20B-209ENST00000470356 BOLA2Q9H3K6 86 aa37.93■■■■□ 3.66
HMG20B-209ENST00000470356 NAV1Q8NEY1 1877 aa37.92■■■■□ 3.66
HMG20B-209ENST00000470356 POLR3DP05423 398 aaPredicted RBP37.92■■■■□ 3.66
HMG20B-209ENST00000470356 INHAP05111 366 aa37.91■■■■□ 3.66
HMG20B-209ENST00000470356 SHMT1P34896 483 aa37.91■■■■□ 3.66
HMG20B-209ENST00000470356 HERVK_113P62684 666 aa37.91■■■■□ 3.66
HMG20B-209ENST00000470356 ABCB5Q2M3G0 1257 aa37.91■■■■□ 3.66
HMG20B-209ENST00000470356 HAUS7Q99871 368 aa37.91■■■■□ 3.66
HMG20B-209ENST00000470356 LRRCC1Q9C099 1032 aa37.91■■■■□ 3.66
HMG20B-209ENST00000470356 MCM9Q9NXL9 1143 aa37.9■■■■□ 3.66
HMG20B-209ENST00000470356 GJD2Q9UKL4 321 aa37.9■■■■□ 3.66
HMG20B-209ENST00000470356 TAOK2Q9UL54 1235 aa37.9■■■■□ 3.66
HMG20B-209ENST00000470356 C12orf42Q96LP6 360 aa37.89■■■■□ 3.66
HMG20B-209ENST00000470356 GABPAQ06546 454 aa37.88■■■■□ 3.65
HMG20B-209ENST00000470356 RAB3GAP1Q15042 981 aa37.88■■■■□ 3.65
HMG20B-209ENST00000470356 LCORLQ8N3X6 602 aa37.88■■■■□ 3.65
HMG20B-209ENST00000470356 GPRC5AQ8NFJ5 357 aa37.88■■■■□ 3.65
HMG20B-209ENST00000470356 U2AF1L4Q8WU68 220 aaKnown RBP37.88■■■■□ 3.65
HMG20B-209ENST00000470356 TXNRD2Q9NNW7 524 aa37.88■■■■□ 3.65
HMG20B-209ENST00000470356 CABP5Q9NP86 173 aa37.88■■■■□ 3.65
HMG20B-209ENST00000470356 ADD2P35612 726 aa37.87■■■■□ 3.65
HMG20B-209ENST00000470356 GTF3C2Q8WUA4 911 aaPredicted RBP37.87■■■■□ 3.65
HMG20B-209ENST00000470356 FEZ1Q99689 392 aa37.87■■■■□ 3.65
HMG20B-209ENST00000470356 DDX24Q9GZR7 859 aaKnown RBP eCLIP37.87■■■■□ 3.652e-11■□□□□ 8.5
HMG20B-209ENST00000470356 DCP1AQ9NPI6 582 aaPredicted RBP37.87■■■■□ 3.65
HMG20B-209ENST00000470356 RBPJLQ9UBG7 517 aa37.87■■■■□ 3.65
HMG20B-209ENST00000470356 UBE2Q1Q7Z7E8 422 aa37.86■■■■□ 3.65
HMG20B-209ENST00000470356 SDR42E1Q8WUS8 393 aa37.86■■■■□ 3.65
HMG20B-209ENST00000470356 KIAA1683Q9H0B3 1180 aa37.86■■■■□ 3.65
HMG20B-209ENST00000470356 SGPL1O95470 568 aa37.85■■■■□ 3.65
HMG20B-209ENST00000470356 USP14P54578 494 aa37.85■■■■□ 3.65
HMG20B-209ENST00000470356 ARMT1Q9H993 441 aa37.85■■■■□ 3.65
HMG20B-209ENST00000470356 MYH7P12883 1935 aa37.85■■■■□ 3.65
HMG20B-209ENST00000470356 CAPN2P17655 700 aa37.84■■■■□ 3.65
HMG20B-209ENST00000470356 PLXNB2O15031 1838 aa37.84■■■■□ 3.65
HMG20B-209ENST00000470356 SMARCA5O60264 1052 aaPredicted RBP37.83■■■■□ 3.65
HMG20B-209ENST00000470356 PEX10O60683 326 aa37.83■■■■□ 3.65
HMG20B-209ENST00000470356 ZYXQ15942 572 aaKnown RBP37.83■■■■□ 3.65
HMG20B-209ENST00000470356 ACER1Q8TDN7 264 aa37.83■■■■□ 3.65
HMG20B-209ENST00000470356 PAK6Q9NQU5 681 aaPredicted RBP37.83■■■■□ 3.65
HMG20B-209ENST00000470356 USP17L15C9J2P7 530 aa37.82■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms