RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 CICQ96RK0 1608 aaPredicted RBP9.27□□□□□ -0.92
SMC4-212ENST00000470240 RTL9Q8NET4 1388 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 CCDC69A6NI79 296 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 NEMFO60524 1076 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 CTDNEP1O95476 244 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 CHGBP05060 677 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 PDE6AP16499 860 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 CDC25BP30305 580 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 CEBPZQ03701 1054 aaKnown RBP9.27□□□□□ -0.93
SMC4-212ENST00000470240 SCARF1Q14162 830 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 SAFBQ15424 915 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMC4-212ENST00000470240 ALX1Q15699 326 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 TTLL5Q6EMB2 1281 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 Q6ZNB5 142 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 CHST3Q7LGC8 479 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 VGLL2Q8N8G2 317 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 FSIP1Q8NA03 581 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 SPATA5Q8NB90 893 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 TDRD7Q8NHU6 1098 aaKnown RBP9.27□□□□□ -0.93
SMC4-212ENST00000470240 SDF4Q9BRK5 362 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 MTA3Q9BTC8 594 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 PUS7LQ9H0K6 701 aaKnown RBP9.27□□□□□ -0.93
SMC4-212ENST00000470240 CBX8Q9HC52 389 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 NCOA5Q9HCD5 579 aaKnown RBP9.27□□□□□ -0.93
SMC4-212ENST00000470240 POLR3EQ9NVU0 708 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 ZNF532Q9HCE3 1301 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 COL16A1Q07092 1604 aaPredicted RBP9.27□□□□□ -0.93
SMC4-212ENST00000470240 CHD4Q14839 1912 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 AKAP11Q9UKA4 1901 aa9.27□□□□□ -0.93
SMC4-212ENST00000470240 DDX60Q8IY21 1712 aaKnown RBP9.26□□□□□ -0.93
SMC4-212ENST00000470240 NWD2Q9ULI1 1742 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 CCDC196A0A1B0GTZ2 297 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 PATL2C9JE40 543 aaKnown RBP9.26□□□□□ -0.93
SMC4-212ENST00000470240 DYNC1I1O14576 645 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 ZBTB43O43298 467 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 DXOO77932 396 aaKnown RBP9.26□□□□□ -0.93
SMC4-212ENST00000470240 JUNDP17535 347 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 TDO2P48775 406 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 RPIAP49247 311 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 MTMR2Q13614 643 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 NOLC1Q14978 699 aaKnown RBP eCLIP9.26□□□□□ -0.934e-16■■■■■ 30.2
SMC4-212ENST00000470240 ADALQ6DHV7 355 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
SMC4-212ENST00000470240 TRIM22Q8IYM9 498 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 TMTC2Q8N394 836 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 CCDC34Q96HJ3 373 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 PGBD1Q96JS3 809 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 HOOK1Q9UJC3 728 aaKnown RBP9.26□□□□□ -0.93
SMC4-212ENST00000470240 DOCK2Q92608 1830 aa9.26□□□□□ -0.93
SMC4-212ENST00000470240 PHLPP1O60346 1717 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 UQCRHLA0A096LP55 91 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 GOLGA8AA7E2F4 631 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 SH2B2O14492 632 aaPredicted RBP9.25□□□□□ -0.93
SMC4-212ENST00000470240 SPTLC2O15270 562 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 UQCRHP07919 91 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 XBP1P17861 261 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 IARSP41252 1262 aaKnown RBP9.25□□□□□ -0.93
SMC4-212ENST00000470240 PHKA1P46020 1223 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 EIF5P55010 431 aaKnown RBP9.25□□□□□ -0.93
SMC4-212ENST00000470240 GUCY1B3Q02153 619 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 SSRP1Q08945 709 aaKnown RBP9.25□□□□□ -0.93
SMC4-212ENST00000470240 COL9A3Q14050 684 aaPredicted RBP9.25□□□□□ -0.93
SMC4-212ENST00000470240 HSP90AA2PQ14568 343 aaPredicted RBP9.25□□□□□ -0.93
SMC4-212ENST00000470240 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 TMEM67Q5HYA8 995 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 MFSD6Q6ZSS7 791 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 LUZP1Q86V48 1076 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 FBXO18Q8NFZ0 1043 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 USP28Q96RU2 1077 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 NOL10Q9BSC4 688 aaKnown RBP9.25□□□□□ -0.93
SMC4-212ENST00000470240 ALG1Q9BT22 464 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 DNAJC25Q9H1X3 360 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 PIH1D3Q9NQM4 214 aaKnown RBP9.25□□□□□ -0.93
SMC4-212ENST00000470240 NIP7Q9Y221 180 aaKnown RBP eCLIP9.25□□□□□ -0.931e-7■■■■■ 83.2
SMC4-212ENST00000470240 SLC12A7Q9Y666 1083 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 RREB1Q92766 1687 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 PNPLA7Q6ZV29 1317 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 STK36Q9NRP7 1315 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 TIAM2Q8IVF5 1701 aa9.25□□□□□ -0.93
SMC4-212ENST00000470240 LOC102724428A0A0B4J2F2 783 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 SPDYE5A6NIY4 337 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 SMTNL1A8MU46 457 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 NRG2O14511 850 aaPredicted RBP9.24□□□□□ -0.93
SMC4-212ENST00000470240 IFIT3O14879 490 aaKnown RBP9.24□□□□□ -0.93
SMC4-212ENST00000470240 DTNBO60941 627 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 MBD4O95243 580 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 FGFR2P21802 821 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 GJA5P36382 358 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 LIFRP42702 1097 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 CRKLP46109 303 aaKnown RBP9.24□□□□□ -0.93
SMC4-212ENST00000470240 ZNF75DP51815 510 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 RCAN1P53805 252 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 SIK1P57059 783 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 MYSM1Q5VVJ2 828 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 ANO1Q5XXA6 986 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 SARM1Q6SZW1 724 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 PI16Q6UXB8 463 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 MAGEB6Q8N7X4 407 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 SPC24Q8NBT2 197 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 STRBPQ96SI9 672 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms