RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 PI4K2BQ8TCG2 481 aa9.62□□□□□ -0.87
COL11A1-208ENST00000470170 DPH2Q9BQC3 489 aaPredicted RBP9.62□□□□□ -0.87
COL11A1-208ENST00000470170 RC3H2Q9HBD1 1191 aaKnown RBP9.62□□□□□ -0.87
COL11A1-208ENST00000470170 MRS2Q9HD23 443 aa9.62□□□□□ -0.87
COL11A1-208ENST00000470170 VTI1BQ9UEU0 232 aa9.62□□□□□ -0.87
COL11A1-208ENST00000470170 PAPLNO95428 1278 aa9.61□□□□□ -0.87
COL11A1-208ENST00000470170 CST3P01034 146 aaPredicted RBP9.61□□□□□ -0.87
COL11A1-208ENST00000470170 PGRP06401 933 aa9.61□□□□□ -0.87
COL11A1-208ENST00000470170 JUNBP17275 347 aaPredicted RBP9.61□□□□□ -0.87
COL11A1-208ENST00000470170 RPL6Q02878 288 aaKnown RBP9.61□□□□□ -0.87
COL11A1-208ENST00000470170 IKZF1Q13422 519 aa9.61□□□□□ -0.87
COL11A1-208ENST00000470170 ASB11Q8WXH4 323 aa9.61□□□□□ -0.87
COL11A1-208ENST00000470170 GOLGA2P5Q9HBQ8 144 aa9.61□□□□□ -0.87
COL11A1-208ENST00000470170 PRDM7Q9NQW5 492 aa9.61□□□□□ -0.87
COL11A1-208ENST00000470170 TJP2Q9UDY2 1190 aa9.61□□□□□ -0.87
COL11A1-208ENST00000470170 TACC3Q9Y6A5 838 aa9.61□□□□□ -0.87
COL11A1-208ENST00000470170 SFRP5Q5T4F7 317 aa9.6□□□□□ -0.87
COL11A1-208ENST00000470170 LRRN4CLQ8ND94 238 aa9.6□□□□□ -0.87
COL11A1-208ENST00000470170 ASIC4Q96FT7 647 aa9.6□□□□□ -0.87
COL11A1-208ENST00000470170 PITPNM2Q9BZ72 1349 aa9.59□□□□□ -0.87
COL11A1-208ENST00000470170 CLCN7P51798 805 aa9.59□□□□□ -0.87
COL11A1-208ENST00000470170 BNC2Q6ZN30 1099 aaPredicted RBP9.59□□□□□ -0.87
COL11A1-208ENST00000470170 FAM155AB1AL88 458 aaPredicted RBP9.58□□□□□ -0.88
COL11A1-208ENST00000470170 ZNF865P0CJ78 1059 aaPredicted RBP9.58□□□□□ -0.88
COL11A1-208ENST00000470170 ERCC3P19447 782 aa9.58□□□□□ -0.88
COL11A1-208ENST00000470170 MRPL41Q8IXM3 137 aaKnown RBP9.58□□□□□ -0.88
COL11A1-208ENST00000470170 MFSD4AQ8N468 514 aa9.58□□□□□ -0.88
COL11A1-208ENST00000470170 TMEM87BQ96K49 555 aa9.58□□□□□ -0.88
COL11A1-208ENST00000470170 CORINQ9Y5Q5 1042 aa9.58□□□□□ -0.88
COL11A1-208ENST00000470170 CBX7O95931 251 aa9.57□□□□□ -0.88
COL11A1-208ENST00000470170 ZP2Q05996 745 aa9.57□□□□□ -0.88
COL11A1-208ENST00000470170 CAMK2GQ13555 558 aaPredicted RBP9.57□□□□□ -0.88
COL11A1-208ENST00000470170 CDKAL1Q5VV42 579 aa9.57□□□□□ -0.88
COL11A1-208ENST00000470170 SLC23A3Q6PIS1 610 aa9.57□□□□□ -0.88
COL11A1-208ENST00000470170 C22orf34Q6ZV56 151 aa9.57□□□□□ -0.88
COL11A1-208ENST00000470170 CDH24Q86UP0 819 aa9.57□□□□□ -0.88
COL11A1-208ENST00000470170 HSPA12BQ96MM6 686 aa9.57□□□□□ -0.88
COL11A1-208ENST00000470170 CAPN6Q9Y6Q1 641 aa9.57□□□□□ -0.88
COL11A1-208ENST00000470170 PF4P02776 101 aa9.56□□□□□ -0.88
COL11A1-208ENST00000470170 LMNB2Q03252 620 aa9.56□□□□□ -0.88
COL11A1-208ENST00000470170 PDE4BQ07343 736 aa9.56□□□□□ -0.88
COL11A1-208ENST00000470170 LCE3BQ5TA77 95 aa9.56□□□□□ -0.88
COL11A1-208ENST00000470170 ZNF746Q6NUN9 644 aaPredicted RBP9.56□□□□□ -0.88
COL11A1-208ENST00000470170 ATG4DQ86TL0 474 aaPredicted RBP9.56□□□□□ -0.88
COL11A1-208ENST00000470170 KRTAP1-3Q8IUG1 177 aa9.56□□□□□ -0.88
COL11A1-208ENST00000470170 ACSF2Q96CM8 615 aaPredicted RBP9.56□□□□□ -0.88
COL11A1-208ENST00000470170 SEMA3GQ9NS98 782 aa9.56□□□□□ -0.88
COL11A1-208ENST00000470170 H3BS24 57 aa9.55□□□□□ -0.88
COL11A1-208ENST00000470170 BIN1O00499 593 aa9.55□□□□□ -0.88
COL11A1-208ENST00000470170 F13A1P00488 732 aa9.55□□□□□ -0.88
COL11A1-208ENST00000470170 GBP2P32456 591 aaPredicted RBP9.55□□□□□ -0.88
COL11A1-208ENST00000470170 SLC6A19Q695T7 634 aa9.55□□□□□ -0.88
COL11A1-208ENST00000470170 OGFOD2Q6N063 350 aa9.55□□□□□ -0.88
COL11A1-208ENST00000470170 CCDC84Q86UT8 332 aaPredicted RBP9.55□□□□□ -0.88
COL11A1-208ENST00000470170 RHOVQ96L33 236 aa9.55□□□□□ -0.88
COL11A1-208ENST00000470170 ATP13A1Q9HD20 1204 aa9.55□□□□□ -0.88
COL11A1-208ENST00000470170 FAM221AA4D161 298 aa9.54□□□□□ -0.88
COL11A1-208ENST00000470170 CILPO75339 1184 aa9.54□□□□□ -0.88
COL11A1-208ENST00000470170 BPNT1O95861 308 aa9.54□□□□□ -0.88
COL11A1-208ENST00000470170 MCATQ8IVS2 390 aaKnown RBP9.54□□□□□ -0.88
COL11A1-208ENST00000470170 TMEM74Q96NL1 305 aa9.54□□□□□ -0.88
COL11A1-208ENST00000470170 ADAM30Q9UKF2 790 aa9.54□□□□□ -0.88
COL11A1-208ENST00000470170 ST14Q9Y5Y6 855 aa9.54□□□□□ -0.88
COL11A1-208ENST00000470170 CARMIL2Q6F5E8 1435 aa9.54□□□□□ -0.88
COL11A1-208ENST00000470170 PLCG1P19174 1290 aa9.53□□□□□ -0.88
COL11A1-208ENST00000470170 FAM160A1Q05DH4 1040 aa9.53□□□□□ -0.88
COL11A1-208ENST00000470170 RELL1Q8IUW5 271 aa9.53□□□□□ -0.88
COL11A1-208ENST00000470170 GATAD2BQ8WXI9 593 aa9.53□□□□□ -0.88
COL11A1-208ENST00000470170 CARS2Q9HA77 564 aaKnown RBP9.53□□□□□ -0.88
COL11A1-208ENST00000470170 CYP7A1P22680 504 aa9.52□□□□□ -0.89
COL11A1-208ENST00000470170 DIEXFQ68CQ4 756 aaKnown RBP9.52□□□□□ -0.89
COL11A1-208ENST00000470170 RSRP1Q9BUV0 290 aa9.52□□□□□ -0.89
COL11A1-208ENST00000470170 BCL2L13Q9BXK5 485 aa9.52□□□□□ -0.89
COL11A1-208ENST00000470170 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.52□□□□□ -0.89
COL11A1-208ENST00000470170 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
COL11A1-208ENST00000470170 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
COL11A1-208ENST00000470170 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
COL11A1-208ENST00000470170 TNK2Q07912 1038 aa9.51□□□□□ -0.89
COL11A1-208ENST00000470170 DNAJB8Q8NHS0 232 aa9.51□□□□□ -0.89
COL11A1-208ENST00000470170 FAM168AQ92567 244 aa9.51□□□□□ -0.89
COL11A1-208ENST00000470170 ETV3P41162 512 aa9.5□□□□□ -0.89
COL11A1-208ENST00000470170 SNAP47Q5SQN1 464 aa9.5□□□□□ -0.89
COL11A1-208ENST00000470170 FAM13CQ8NE31 585 aa9.5□□□□□ -0.89
COL11A1-208ENST00000470170 GIPC2Q8TF65 315 aa9.5□□□□□ -0.89
COL11A1-208ENST00000470170 GRIN3BO60391 1043 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 KIR3DL1P43629 444 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 PWP1Q13610 501 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 GOLM1Q8NBJ4 401 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 FLAD1Q8NFF5 587 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 FBXO27Q8NI29 283 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 PPP1R13LQ8WUF5 828 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 UBE2FQ969M7 185 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 COX4I2Q96KJ9 171 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 COPRSQ9NQ92 184 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 KBTBD4Q9NVX7 518 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 LMCD1Q9NZU5 365 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 ZSWIM5Q9P217 1185 aa9.49□□□□□ -0.89
COL11A1-208ENST00000470170 POLR3KQ9Y2Y1 108 aaPredicted RBP9.49□□□□□ -0.89
COL11A1-208ENST00000470170 ITGAEP38570 1179 aa9.48□□□□□ -0.89
COL11A1-208ENST00000470170 TMEM201Q5SNT2 666 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms