RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 USP17L5A8MUK1 530 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 CYP2D6P10635 497 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 HSPA8P11142 646 aaKnown RBP23.13■■□□□ 1.29
PCGF3-208ENST00000470161 SDSP20132 328 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 MCMDC2Q4G0Z9 681 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 C12orf60Q5U649 245 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 TATDN1Q6P1N9 297 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 CTR9Q6PD62 1173 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 BRI3BPQ8WY22 251 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 TBC1D2Q9BYX2 928 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 AS3MTQ9HBK9 375 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 CABP5Q9NP86 173 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 SWAP70Q9UH65 585 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 KCNH4Q9UQ05 1017 aa23.13■■□□□ 1.29
PCGF3-208ENST00000470161 TRIM75PA6NK02 468 aa23.12■■□□□ 1.29
PCGF3-208ENST00000470161 MINDY4BA8MYZ0 360 aa23.12■■□□□ 1.29
PCGF3-208ENST00000470161 RRP1BQ14684 758 aaKnown RBP23.12■■□□□ 1.29
PCGF3-208ENST00000470161 FAM227BQ96M60 508 aa23.12■■□□□ 1.29
PCGF3-208ENST00000470161 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.12■■□□□ 1.29
PCGF3-208ENST00000470161 TAOK2Q9UL54 1235 aa23.12■■□□□ 1.29
PCGF3-208ENST00000470161 AFG3L2Q9Y4W6 797 aa23.12■■□□□ 1.29
PCGF3-208ENST00000470161 CYP2D7A0A087X1C5 515 aa23.11■■□□□ 1.29
PCGF3-208ENST00000470161 IGF2BP3O00425 579 aaKnown RBP eCLIP23.11■■□□□ 1.29
PCGF3-208ENST00000470161 NMIQ13287 307 aaPredicted RBP23.11■■□□□ 1.29
PCGF3-208ENST00000470161 CCDC129Q6ZRS4 1044 aa23.11■■□□□ 1.29
PCGF3-208ENST00000470161 CCDC84Q86UT8 332 aaPredicted RBP23.11■■□□□ 1.29
PCGF3-208ENST00000470161 NAPBQ9H115 298 aa23.11■■□□□ 1.29
PCGF3-208ENST00000470161 TBC1D8O95759 1140 aa23.1■■□□□ 1.29
PCGF3-208ENST00000470161 GABPAQ06546 454 aa23.1■■□□□ 1.29
PCGF3-208ENST00000470161 ABCB5Q2M3G0 1257 aa23.1■■□□□ 1.29
PCGF3-208ENST00000470161 IFNL3Q8IZI9 196 aa23.1■■□□□ 1.29
PCGF3-208ENST00000470161 DYNLL2Q96FJ2 89 aa23.1■■□□□ 1.29
PCGF3-208ENST00000470161 PTPN18Q99952 460 aa23.1■■□□□ 1.29
PCGF3-208ENST00000470161 ZBTB21Q9ULJ3 1066 aa23.1■■□□□ 1.29
PCGF3-208ENST00000470161 BAZ2AQ9UIF9 1905 aaKnown RBP23.1■■□□□ 1.29
PCGF3-208ENST00000470161 SIPA1L1O43166 1804 aa23.1■■□□□ 1.29
PCGF3-208ENST00000470161 A0A0D9SFI3 127 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 MPHOSPH10O00566 681 aaKnown RBP23.09■■□□□ 1.29
PCGF3-208ENST00000470161 GH2P01242 217 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 SHMT1P34896 483 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 SBK1Q52WX2 424 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 FASTKD5Q7L8L6 764 aaKnown RBP23.09■■□□□ 1.29
PCGF3-208ENST00000470161 ZNF280CQ8ND82 737 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 TBC1D32Q96NH3 1257 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 DOCK1Q14185 1865 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 EVX2Q03828 476 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 SPP2Q13103 211 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 RAB3GAP1Q15042 981 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 CWC27Q6UX04 472 aaKnown RBP23.09■■□□□ 1.29
PCGF3-208ENST00000470161 PRDM10Q9NQV6 1147 aa23.09■■□□□ 1.29
PCGF3-208ENST00000470161 DDX60LQ5H9U9 1706 aaKnown RBP23.07■■□□□ 1.28
PCGF3-208ENST00000470161 CDK8P49336 464 aa23.07■■□□□ 1.28
PCGF3-208ENST00000470161 TAF1CQ15572 869 aaPredicted RBP23.07■■□□□ 1.28
PCGF3-208ENST00000470161 GADL1Q6ZQY3 521 aa23.07■■□□□ 1.28
PCGF3-208ENST00000470161 SLC44A5Q8NCS7 719 aa23.07■■□□□ 1.28
PCGF3-208ENST00000470161 ZNF287Q9HBT7 754 aa23.07■■□□□ 1.28
PCGF3-208ENST00000470161 EPB41L4AQ9HCS5 686 aaPredicted RBP23.07■■□□□ 1.28
PCGF3-208ENST00000470161 A0A0G2JLL6 359 aaPredicted RBP23.06■■□□□ 1.28
PCGF3-208ENST00000470161 BTBD19C9JJ37 291 aa23.06■■□□□ 1.28
PCGF3-208ENST00000470161 SLC3A2P08195 630 aaKnown RBP23.06■■□□□ 1.28
PCGF3-208ENST00000470161 C16orf86Q6ZW13 317 aa23.06■■□□□ 1.28
PCGF3-208ENST00000470161 PRRT2Q7Z6L0 340 aaPredicted RBP23.06■■□□□ 1.28
PCGF3-208ENST00000470161 STK11IPQ8N1F8 1099 aa23.06■■□□□ 1.28
PCGF3-208ENST00000470161 FAM43AQ8N2R8 423 aa23.06■■□□□ 1.28
PCGF3-208ENST00000470161 MKNK2Q9HBH9 465 aa23.06■■□□□ 1.28
PCGF3-208ENST00000470161 JAG1P78504 1218 aa23.06■■□□□ 1.28
PCGF3-208ENST00000470161 WDR18Q9BV38 432 aa23.06■■□□□ 1.28
PCGF3-208ENST00000470161 C22orf23Q9BZE7 217 aa23.06■■□□□ 1.28
PCGF3-208ENST00000470161 ZFYVE28Q9HCC9 887 aa23.06■■□□□ 1.28
PCGF3-208ENST00000470161 ZCCHC17Q9NP64 241 aaKnown RBP23.06■■□□□ 1.28
PCGF3-208ENST00000470161 CCDC171Q6TFL3 1326 aa23.05■■□□□ 1.28
PCGF3-208ENST00000470161 SHROOM1Q2M3G4 852 aaPredicted RBP23.05■■□□□ 1.28
PCGF3-208ENST00000470161 ANKRD23Q86SG2 305 aa23.05■■□□□ 1.28
PCGF3-208ENST00000470161 CCDC17Q96LX7 622 aa23.05■■□□□ 1.28
PCGF3-208ENST00000470161 CFHR5Q9BXR6 569 aa23.05■■□□□ 1.28
PCGF3-208ENST00000470161 USP17L10C9JJH3 530 aa23.04■■□□□ 1.28
PCGF3-208ENST00000470161 CRHR2Q13324 411 aa23.04■■□□□ 1.28
PCGF3-208ENST00000470161 VPS53Q5VIR6 699 aa23.04■■□□□ 1.28
PCGF3-208ENST00000470161 SMIM22K7EJ46 135 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 PDHXO00330 501 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 HMGCS2P54868 508 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 ZNF589Q86UQ0 364 aaPredicted RBP23.03■■□□□ 1.28
PCGF3-208ENST00000470161 FEZ1Q99689 392 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 TMOD4Q9NZQ9 345 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 ATAD5Q96QE3 1844 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 BACE1P56817 501 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 PDE4BQ07343 736 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 MTMR2Q13614 643 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 TMEM179Q6ZVK1 233 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 RUFY2Q8WXA3 655 aa23.03■■□□□ 1.28
PCGF3-208ENST00000470161 LAMB1P07942 1786 aa23.02■■□□□ 1.28
PCGF3-208ENST00000470161 C19orf81C9J6K1 198 aa23.02■■□□□ 1.28
PCGF3-208ENST00000470161 GPR25O00155 361 aa23.02■■□□□ 1.28
PCGF3-208ENST00000470161 HSPD1P10809 573 aaKnown RBP23.02■■□□□ 1.28
PCGF3-208ENST00000470161 PPARAQ07869 468 aa23.02■■□□□ 1.28
PCGF3-208ENST00000470161 CASC1Q6TDU7 716 aa23.02■■□□□ 1.28
PCGF3-208ENST00000470161 PROCA1Q8NCQ7 364 aaPredicted RBP23.02■■□□□ 1.28
PCGF3-208ENST00000470161 SEPT2Q15019 361 aa23.01■■□□□ 1.27
PCGF3-208ENST00000470161 ZNF444Q8N0Y2 327 aaPredicted RBP23.01■■□□□ 1.27
PCGF3-208ENST00000470161 AKR1B1P15121 316 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms