RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 CEP57L1Q8IYX8 460 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 PDCL2Q8N4E4 241 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 ENAHQ8N8S7 591 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-203ENST00000469739 SLC44A5Q8NCS7 719 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 COL1A1P02452 1464 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-203ENST00000469739 GOLGA6L6A8MZA4 724 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 ATP1A3P13637 1013 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 SAFBQ15424 915 aaKnown RBP eCLIP10.85□□□□□ -0.67
TOP3A-203ENST00000469739 LONRF3Q496Y0 759 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 ZNF771Q7L3S4 317 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-203ENST00000469739 ANO10Q9NW15 660 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 F8W031 263 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-203ENST00000469739 EARS2Q5JPH6 523 aaKnown RBP10.85□□□□□ -0.67
TOP3A-203ENST00000469739 BRAPQ7Z569 592 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 DHX40Q8IX18 779 aaKnown RBP10.85□□□□□ -0.67
TOP3A-203ENST00000469739 ESR2Q92731 530 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 AK7Q96M32 723 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 RIOK1Q9BRS2 568 aaKnown RBP10.85□□□□□ -0.67
TOP3A-203ENST00000469739 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 SLC39A14Q15043 492 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 CREBRFQ8IUR6 639 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 CNNM2Q9H8M5 875 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 NARFQ9UHQ1 456 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 BTAF1O14981 1849 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 SCN7AQ01118 1682 aa10.85□□□□□ -0.67
TOP3A-203ENST00000469739 BAZ2AQ9UIF9 1905 aaKnown RBP10.84□□□□□ -0.67
TOP3A-203ENST00000469739 ZNF804BA4D1E1 1349 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 UBE4AQ14139 1066 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 CTR9Q6PD62 1173 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 OLFM4Q6UX06 510 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 RBM43Q6ZSC3 357 aaKnown RBP10.84□□□□□ -0.67
TOP3A-203ENST00000469739 ILDR2Q71H61 639 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 TDRD7Q8NHU6 1098 aaKnown RBP10.84□□□□□ -0.67
TOP3A-203ENST00000469739 IFNKQ9P0W0 207 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 THSD7AQ9UPZ6 1657 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.84□□□□□ -0.67
TOP3A-203ENST00000469739 TSPY2A6NKD2 308 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 WNT7AO00755 349 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 ADAMTS3O15072 1205 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 TOB1P50616 345 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-203ENST00000469739 SF3B3Q15393 1217 aaKnown RBP10.84□□□□□ -0.67
TOP3A-203ENST00000469739 TRAPPC3LQ5T215 181 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 CLEC4GQ6UXB4 293 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 TICAM2Q86XR7 235 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 CRACR2BQ8N4Y2 399 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-203ENST00000469739 CNNM3Q8NE01 707 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 STAG1Q8WVM7 1258 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 NSUN4Q96CB9 384 aaKnown RBP10.84□□□□□ -0.67
TOP3A-203ENST00000469739 LRRC4BQ9NT99 713 aa10.84□□□□□ -0.67
TOP3A-203ENST00000469739 RIMBP2O15034 1052 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 POLR2DO15514 142 aaKnown RBP10.83□□□□□ -0.68
TOP3A-203ENST00000469739 RPS6KA4O75676 772 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 YEATS4O95619 227 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 CDC25AP30304 524 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 AFMP43652 599 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 USP5P45974 858 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 ZNF174Q15697 407 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 VPS72Q15906 364 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 SGMS1Q86VZ5 419 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 NOSTRINQ8IVI9 506 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 MAPKAPK5Q8IW41 473 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 TRMT44Q8IYL2 757 aaKnown RBP10.83□□□□□ -0.68
TOP3A-203ENST00000469739 KIAA1524Q8TCG1 905 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 SHISA4Q96DD7 197 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 ZSCAN10Q96SZ4 725 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-203ENST00000469739 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-203ENST00000469739 A0A1B0GUL6 1792 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 MYH2Q9UKX2 1941 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 NHSQ6T4R5 1651 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 USP27XA6NNY8 438 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 FMNL1O95466 1100 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-203ENST00000469739 GNAT2P19087 354 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 LIFRP42702 1097 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 ALX1Q15699 326 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 RASGRP4Q8TDF6 673 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 RNF41Q9H4P4 317 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-203ENST00000469739 PRDM16Q9HAZ2 1276 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 USP17L3A6NCW0 530 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 USP17L4A6NCW7 530 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 GOLGA8HP0CJ92 632 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 IFNAR1P17181 557 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 KLHL10Q6JEL2 608 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 USP17L1Q7RTZ2 530 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 IQCA1Q86XH1 822 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 TGFBRAP1Q8WUH2 860 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 KCNH3Q9ULD8 1083 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 STX8Q9UNK0 236 aa10.83□□□□□ -0.68
TOP3A-203ENST00000469739 CTAGE5O15320 804 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 U2AF2P26368 475 aaKnown RBP eCLIP10.82□□□□□ -0.683e-6■■□□□ 13
TOP3A-203ENST00000469739 PTPAQ15257 358 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 TPD52L1Q16890 204 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-203ENST00000469739 TMC6Q7Z403 805 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 CATIPQ7Z7H3 387 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 NBPF11Q86T75 865 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 PLA2G4DQ86XP0 818 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 FBXL16Q8N461 479 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 CNBD1Q8NA66 436 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 GPKOWQ92917 476 aaPredicted RBP eCLIP10.82□□□□□ -0.68
TOP3A-203ENST00000469739 XPO4Q9C0E2 1151 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms