RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 DDRGK1Q96HY6 314 aa25.67■■□□□ 1.7
RTN4R-205ENST00000469601 ARHGAP39Q9C0H5 1083 aa25.67■■□□□ 1.7
RTN4R-205ENST00000469601 ATP8A2Q9NTI2 1148 aa25.67■■□□□ 1.7
RTN4R-205ENST00000469601 USP17L10C9JJH3 530 aa25.66■■□□□ 1.7
RTN4R-205ENST00000469601 MBD4O95243 580 aa25.66■■□□□ 1.7
RTN4R-205ENST00000469601 FMNL1O95466 1100 aaPredicted RBP25.66■■□□□ 1.7
RTN4R-205ENST00000469601 OSBPP22059 807 aa25.66■■□□□ 1.7
RTN4R-205ENST00000469601 FCGRTP55899 365 aa25.66■■□□□ 1.7
RTN4R-205ENST00000469601 CERKLQ49MI3 558 aaPredicted RBP25.66■■□□□ 1.7
RTN4R-205ENST00000469601 TREML2Q5T2D2 321 aa25.66■■□□□ 1.7
RTN4R-205ENST00000469601 ARMT1Q9H993 441 aa25.66■■□□□ 1.7
RTN4R-205ENST00000469601 DCP1AQ9NPI6 582 aaPredicted RBP25.66■■□□□ 1.7
RTN4R-205ENST00000469601 TTC41PQ6P2S7 1318 aa25.65■■□□□ 1.7
RTN4R-205ENST00000469601 ERC2O15083 957 aa25.65■■□□□ 1.7
RTN4R-205ENST00000469601 GH2P01242 217 aa25.65■■□□□ 1.7
RTN4R-205ENST00000469601 PLCD1P51178 756 aa25.65■■□□□ 1.7
RTN4R-205ENST00000469601 MTMR2Q13614 643 aa25.65■■□□□ 1.7
RTN4R-205ENST00000469601 LRRFIP1Q32MZ4 808 aaKnown RBP25.65■■□□□ 1.7
RTN4R-205ENST00000469601 SLC9C1Q4G0N8 1177 aa25.65■■□□□ 1.7
RTN4R-205ENST00000469601 AMOTL1Q8IY63 956 aa25.65■■□□□ 1.7
RTN4R-205ENST00000469601 CABP5Q9NP86 173 aa25.65■■□□□ 1.7
RTN4R-205ENST00000469601 PTCH2Q9Y6C5 1203 aa25.65■■□□□ 1.7
RTN4R-205ENST00000469601 GCLCP48506 637 aaPredicted RBP25.64■■□□□ 1.7
RTN4R-205ENST00000469601 JAG1P78504 1218 aa25.64■■□□□ 1.7
RTN4R-205ENST00000469601 KBTBD3Q8NAB2 608 aa25.64■■□□□ 1.7
RTN4R-205ENST00000469601 SDR42E1Q8WUS8 393 aa25.64■■□□□ 1.7
RTN4R-205ENST00000469601 TRIM47Q96LD4 638 aa25.64■■□□□ 1.7
RTN4R-205ENST00000469601 SIPA1L1O43166 1804 aa25.64■■□□□ 1.7
RTN4R-205ENST00000469601 CDK5RAP2Q96SN8 1893 aa25.64■■□□□ 1.69
RTN4R-205ENST00000469601 ABCB5Q2M3G0 1257 aa25.63■■□□□ 1.69
RTN4R-205ENST00000469601 SRRDQ9UH36 339 aa25.63■■□□□ 1.69
RTN4R-205ENST00000469601 PHIPQ8WWQ0 1821 aa25.63■■□□□ 1.69
RTN4R-205ENST00000469601 GABPAQ06546 454 aa25.62■■□□□ 1.69
RTN4R-205ENST00000469601 HDAC1Q13547 482 aaPredicted RBP25.62■■□□□ 1.69
RTN4R-205ENST00000469601 GCC1Q96CN9 775 aa25.62■■□□□ 1.69
RTN4R-205ENST00000469601 ZFYP08048 801 aaPredicted RBP25.61■■□□□ 1.69
RTN4R-205ENST00000469601 SHMT1P34896 483 aa25.61■■□□□ 1.69
RTN4R-205ENST00000469601 IRX3P78415 501 aaPredicted RBP25.61■■□□□ 1.69
RTN4R-205ENST00000469601 RAB3GAP1Q15042 981 aa25.61■■□□□ 1.69
RTN4R-205ENST00000469601 USP17L2Q6R6M4 530 aa25.61■■□□□ 1.69
RTN4R-205ENST00000469601 ASCC2Q9H1I8 757 aaPredicted RBP25.61■■□□□ 1.69
RTN4R-205ENST00000469601 SWAP70Q9UH65 585 aa25.61■■□□□ 1.69
RTN4R-205ENST00000469601 GLRX3O76003 335 aaKnown RBP25.6■■□□□ 1.69
RTN4R-205ENST00000469601 HOXA7P31268 230 aaPredicted RBP25.6■■□□□ 1.69
RTN4R-205ENST00000469601 FAM110CQ1W6H9 321 aa25.6■■□□□ 1.69
RTN4R-205ENST00000469601 SLFNL1Q499Z3 407 aa25.6■■□□□ 1.69
RTN4R-205ENST00000469601 SLC4A4Q9Y6R1 1079 aa25.6■■□□□ 1.69
RTN4R-205ENST00000469601 ECM2O94769 699 aaPredicted RBP25.59■■□□□ 1.69
RTN4R-205ENST00000469601 CTGFP29279 349 aa25.59■■□□□ 1.69
RTN4R-205ENST00000469601 USP14P54578 494 aa25.59■■□□□ 1.69
RTN4R-205ENST00000469601 SHROOM1Q2M3G4 852 aaPredicted RBP25.59■■□□□ 1.69
RTN4R-205ENST00000469601 TSHZ3Q63HK5 1081 aa25.59■■□□□ 1.69
RTN4R-205ENST00000469601 ANKRD13CQ8N6S4 541 aa25.59■■□□□ 1.69
RTN4R-205ENST00000469601 RAET1EQ8TD07 263 aa25.59■■□□□ 1.69
RTN4R-205ENST00000469601 ZNF333Q96JL9 665 aa25.59■■□□□ 1.69
RTN4R-205ENST00000469601 FEZ1Q99689 392 aa25.59■■□□□ 1.69
RTN4R-205ENST00000469601 TMEM106CQ9BVX2 250 aa25.59■■□□□ 1.69
RTN4R-205ENST00000469601 MYPNQ86TC9 1320 aa25.59■■□□□ 1.69
RTN4R-205ENST00000469601 ATAD5Q96QE3 1844 aa25.58■■□□□ 1.69
RTN4R-205ENST00000469601 RNF113AO15541 343 aaKnown RBP25.58■■□□□ 1.69
RTN4R-205ENST00000469601 PRKAB2O43741 272 aa25.58■■□□□ 1.69
RTN4R-205ENST00000469601 MX1P20591 662 aa25.58■■□□□ 1.69
RTN4R-205ENST00000469601 ANKRD45Q5TZF3 282 aa25.58■■□□□ 1.69
RTN4R-205ENST00000469601 APPBP2Q92624 585 aa25.58■■□□□ 1.69
RTN4R-205ENST00000469601 PUS7LQ9H0K6 701 aaKnown RBP25.58■■□□□ 1.69
RTN4R-205ENST00000469601 MYH1P12882 1939 aa25.58■■□□□ 1.69
RTN4R-205ENST00000469601 PTPRFP10586 1907 aa25.57■■□□□ 1.68
RTN4R-205ENST00000469601 GTF3C2Q8WUA4 911 aaPredicted RBP25.57■■□□□ 1.68
RTN4R-205ENST00000469601 KIAA1683Q9H0B3 1180 aa25.57■■□□□ 1.68
RTN4R-205ENST00000469601 LOC285556D6RIA3 1793 aa25.56■■□□□ 1.68
RTN4R-205ENST00000469601 TNPO2O14787 897 aaKnown RBP25.56■■□□□ 1.68
RTN4R-205ENST00000469601 CHGBP05060 677 aa25.56■■□□□ 1.68
RTN4R-205ENST00000469601 C12orf60Q5U649 245 aa25.56■■□□□ 1.68
RTN4R-205ENST00000469601 COA7Q96BR5 231 aa25.56■■□□□ 1.68
RTN4R-205ENST00000469601 C12orf42Q96LP6 360 aa25.56■■□□□ 1.68
RTN4R-205ENST00000469601 DDX60LQ5H9U9 1706 aaKnown RBP25.56■■□□□ 1.68
RTN4R-205ENST00000469601 USP17L12C9JPN9 530 aa25.55■■□□□ 1.68
RTN4R-205ENST00000469601 USP17L21D6R901 530 aa25.55■■□□□ 1.68
RTN4R-205ENST00000469601 MPHOSPH10O00566 681 aaKnown RBP25.55■■□□□ 1.68
RTN4R-205ENST00000469601 CYP2D6P10635 497 aa25.55■■□□□ 1.68
RTN4R-205ENST00000469601 GIMAP6Q6P9H5 292 aa25.55■■□□□ 1.68
RTN4R-205ENST00000469601 PI4K2BQ8TCG2 481 aa25.55■■□□□ 1.68
RTN4R-205ENST00000469601 STRBPQ96SI9 672 aaKnown RBP25.55■■□□□ 1.68
RTN4R-205ENST00000469601 RWDD1Q9H446 243 aaPredicted RBP25.55■■□□□ 1.68
RTN4R-205ENST00000469601 EMILIN3Q9NT22 766 aa25.55■■□□□ 1.68
RTN4R-205ENST00000469601 NAV1Q8NEY1 1877 aa25.54■■□□□ 1.68
RTN4R-205ENST00000469601 GNAT2P19087 354 aa25.54■■□□□ 1.68
RTN4R-205ENST00000469601 GRK4P32298 578 aa25.54■■□□□ 1.68
RTN4R-205ENST00000469601 PRKCZQ05513 592 aa25.54■■□□□ 1.68
RTN4R-205ENST00000469601 TMEM179Q6ZVK1 233 aa25.54■■□□□ 1.68
RTN4R-205ENST00000469601 SH3TC2Q8TF17 1288 aa25.54■■□□□ 1.68
RTN4R-205ENST00000469601 CCDC17Q96LX7 622 aa25.54■■□□□ 1.68
RTN4R-205ENST00000469601 ARPP21Q9UBL0 812 aaPredicted RBP25.54■■□□□ 1.68
RTN4R-205ENST00000469601 P2RX7Q99572 595 aaKnown RBP25.53■■□□□ 1.68
RTN4R-205ENST00000469601 MORF4L1Q9UBU8 362 aa25.53■■□□□ 1.68
RTN4R-205ENST00000469601 USP17L15C9J2P7 530 aa25.52■■□□□ 1.68
RTN4R-205ENST00000469601 USP17L13C9JLJ4 530 aa25.52■■□□□ 1.68
RTN4R-205ENST00000469601 USP17L11C9JVI0 530 aa25.52■■□□□ 1.68
RTN4R-205ENST00000469601 USP17L18D6R9N7 530 aa25.52■■□□□ 1.68
RTN4R-205ENST00000469601 USP17L22D6RA61 530 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms