RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ELNP15502 786 aa8.76□□□□□ -1.01
PTCD3-208ENST00000469585 ARNTP27540 789 aa8.76□□□□□ -1.01
PTCD3-208ENST00000469585 RAD51AP2Q09MP3 1159 aa8.76□□□□□ -1.01
PTCD3-208ENST00000469585 ZNF252P-AS1Q0IIN9 211 aa8.76□□□□□ -1.01
PTCD3-208ENST00000469585 MAP3K11Q16584 847 aa8.76□□□□□ -1.01
PTCD3-208ENST00000469585 TTBK2Q6IQ55 1244 aa8.76□□□□□ -1.01
PTCD3-208ENST00000469585 NEXMIFQ5QGS0 1516 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 DHX57Q6P158 1386 aaKnown RBP8.75□□□□□ -1.01
PTCD3-208ENST00000469585 TONSLQ96HA7 1378 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 SETBP1Q9Y6X0 1596 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 ECEL1O95672 775 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 NLRP12P59046 1061 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 RPS26P62854 115 aaKnown RBP8.75□□□□□ -1.01
PTCD3-208ENST00000469585 PRRT3Q5FWE3 981 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 AGMOQ6ZNB7 445 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 PHC3Q8NDX5 983 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 KBTBD4Q9NVX7 518 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 SAMM50Q9Y512 469 aa8.75□□□□□ -1.01
PTCD3-208ENST00000469585 NCOA3Q9Y6Q9 1424 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 LOC100289279A0A1B0GTE1 492 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 FAM181BA6NEQ2 426 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 CTSBP07858 339 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 GSTP1P09211 210 aaKnown RBP8.74□□□□□ -1.01
PTCD3-208ENST00000469585 SPATA31C1P0DKV0 1188 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 MAOBP27338 520 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 PWP1Q13610 501 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 POU4F3Q15319 338 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 RELL1Q8IUW5 271 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 RHOVQ96L33 236 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 TMEM74Q96NL1 305 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 EMILIN2Q9BXX0 1053 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 DDX41Q9UJV9 622 aaKnown RBP8.74□□□□□ -1.01
PTCD3-208ENST00000469585 CYP8B1Q9UNU6 501 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 TLR6Q9Y2C9 796 aa8.74□□□□□ -1.01
PTCD3-208ENST00000469585 PPLO60437 1756 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 LAMC1P11047 1609 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 LTBP4Q8N2S1 1624 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 SPATA31E1Q6ZUB1 1445 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 MYOM2P54296 1465 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 F6X3S4 739 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 TFE3P19532 575 aaPredicted RBP8.73□□□□□ -1.01
PTCD3-208ENST00000469585 RACK1P63244 317 aaKnown RBP8.73□□□□□ -1.01
PTCD3-208ENST00000469585 GRIK4Q16099 956 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 ZNF394Q53GI3 561 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 IGF2-ASQ6U949 168 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 GRIN3AQ8TCU5 1115 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 CORO1BQ9BR76 489 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 CACNA2D2Q9NY47 1150 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 POGKQ9P215 609 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 STK17AQ9UEE5 414 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 TMEM94Q12767 1356 aa8.73□□□□□ -1.01
PTCD3-208ENST00000469585 WISP1O95388 367 aa8.72□□□□□ -1.01
PTCD3-208ENST00000469585 DLGAP3O95886 979 aa8.72□□□□□ -1.01
PTCD3-208ENST00000469585 SELPP16109 830 aa8.72□□□□□ -1.01
PTCD3-208ENST00000469585 GBP2P32456 591 aaPredicted RBP8.72□□□□□ -1.01
PTCD3-208ENST00000469585 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
PTCD3-208ENST00000469585 USP48Q86UV5 1035 aa8.72□□□□□ -1.01
PTCD3-208ENST00000469585 USP26Q9BXU7 913 aa8.72□□□□□ -1.01
PTCD3-208ENST00000469585 C19orf44Q9H6X5 657 aa8.72□□□□□ -1.01
PTCD3-208ENST00000469585 STK26Q9P289 416 aa8.72□□□□□ -1.01
PTCD3-208ENST00000469585 PCDHGB7Q9Y5F8 929 aa8.72□□□□□ -1.01
PTCD3-208ENST00000469585 LRRC7Q96NW7 1537 aa8.71□□□□□ -1.01
PTCD3-208ENST00000469585 NWD1Q149M9 1564 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 ERCC5P28715 1186 aaPredicted RBP8.71□□□□□ -1.02
PTCD3-208ENST00000469585 LRRC14Q15048 493 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 SCARA3Q6AZY7 606 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 LLGL2Q6P1M3 1020 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 MPRIPQ6WCQ1 1025 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 UBASH3BQ8TF42 649 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 TGIF2Q9GZN2 237 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 CBX8Q9HC52 389 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 KCNQ5Q9NR82 932 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 PCDHB5Q9Y5E4 795 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 ALKQ9UM73 1620 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 ADGRF5Q8IZF2 1346 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 CLSPNQ9HAW4 1339 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 ADAMTS13Q76LX8 1427 aa8.71□□□□□ -1.02
PTCD3-208ENST00000469585 MINDY4BA8MYZ0 360 aa8.7□□□□□ -1.02
PTCD3-208ENST00000469585 PF4P02776 101 aa8.7□□□□□ -1.02
PTCD3-208ENST00000469585 GARTP22102 1010 aa8.7□□□□□ -1.02
PTCD3-208ENST00000469585 LMNB2Q03252 620 aa8.7□□□□□ -1.02
PTCD3-208ENST00000469585 CAMK2GQ13555 558 aaPredicted RBP8.7□□□□□ -1.02
PTCD3-208ENST00000469585 DUOXA2Q1HG44 320 aa8.7□□□□□ -1.02
PTCD3-208ENST00000469585 KIAA1211Q6ZU35 1233 aa8.7□□□□□ -1.02
PTCD3-208ENST00000469585 ZC3H12CQ9C0D7 883 aaKnown RBP8.7□□□□□ -1.02
PTCD3-208ENST00000469585 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
PTCD3-208ENST00000469585 CCDC86Q9H6F5 360 aaKnown RBP8.7□□□□□ -1.02
PTCD3-208ENST00000469585 KRT82Q9NSB4 513 aa8.7□□□□□ -1.02
PTCD3-208ENST00000469585 CHD2O14647 1828 aaKnown RBP8.7□□□□□ -1.02
PTCD3-208ENST00000469585 PIK3C2GO75747 1445 aa8.7□□□□□ -1.02
PTCD3-208ENST00000469585 TRIM37O94972 964 aa8.69□□□□□ -1.02
PTCD3-208ENST00000469585 MAP1SQ66K74 1059 aaPredicted RBP8.69□□□□□ -1.02
PTCD3-208ENST00000469585 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.69□□□□□ -1.02
PTCD3-208ENST00000469585 ALYREFQ86V81 257 aaKnown RBP8.69□□□□□ -1.02
PTCD3-208ENST00000469585 TRIM42Q8IWZ5 723 aa8.69□□□□□ -1.02
PTCD3-208ENST00000469585 ZNF654Q8IZM8 581 aa8.69□□□□□ -1.02
PTCD3-208ENST00000469585 TMEM130Q8N3G9 435 aa8.69□□□□□ -1.02
PTCD3-208ENST00000469585 KCNB2Q92953 911 aa8.69□□□□□ -1.02
PTCD3-208ENST00000469585 GAL3ST3Q96A11 431 aa8.69□□□□□ -1.02
PTCD3-208ENST00000469585 LENG1Q96BZ8 264 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms