RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 KIF16BQ96L93 1317 aa15.86■□□□□ 0.13
HDAC6-217ENST00000469223 KBTBD13C9JR72 458 aa15.85■□□□□ 0.13
HDAC6-217ENST00000469223 LDHBP07195 334 aaKnown RBP15.85■□□□□ 0.13
HDAC6-217ENST00000469223 ITGB8P26012 769 aa15.85■□□□□ 0.13
HDAC6-217ENST00000469223 ERVK-9P63128 1117 aa15.85■□□□□ 0.13
HDAC6-217ENST00000469223 ERVK-24P63145 666 aa15.85■□□□□ 0.13
HDAC6-217ENST00000469223 RALBP1Q15311 655 aa15.85■□□□□ 0.13
HDAC6-217ENST00000469223 ZNF236Q9UL36 1845 aa15.84■□□□□ 0.13
HDAC6-217ENST00000469223 IFIT1P09914 478 aaKnown RBP15.84■□□□□ 0.13
HDAC6-217ENST00000469223 MAP2K5Q13163 448 aa15.84■□□□□ 0.13
HDAC6-217ENST00000469223 MTMR2Q13614 643 aa15.84■□□□□ 0.13
HDAC6-217ENST00000469223 PUM3Q15397 648 aaKnown RBP15.84■□□□□ 0.13
HDAC6-217ENST00000469223 SH3D19Q5HYK7 790 aa15.84■□□□□ 0.13
HDAC6-217ENST00000469223 TRPV1Q8NER1 839 aa15.84■□□□□ 0.13
HDAC6-217ENST00000469223 SUCLG2Q96I99 432 aa15.84■□□□□ 0.13
HDAC6-217ENST00000469223 EPHX3Q9H6B9 360 aa15.84■□□□□ 0.13
HDAC6-217ENST00000469223 BRWD1Q9NSI6 2320 aa15.84■□□□□ 0.13
HDAC6-217ENST00000469223 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-217ENST00000469223 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-217ENST00000469223 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-217ENST00000469223 ADGRE1Q14246 886 aa15.83■□□□□ 0.12
HDAC6-217ENST00000469223 TMEM31Q5JXX7 168 aa15.83■□□□□ 0.12
HDAC6-217ENST00000469223 TBC1D2Q9BYX2 928 aa15.83■□□□□ 0.12
HDAC6-217ENST00000469223 OSBPL5Q9H0X9 879 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-217ENST00000469223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.83■□□□□ 0.12
HDAC6-217ENST00000469223 C9orf78Q9NZ63 289 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-217ENST00000469223 RBPJLQ9UBG7 517 aa15.83■□□□□ 0.12
HDAC6-217ENST00000469223 NDUFB9Q9Y6M9 179 aa15.83■□□□□ 0.12
HDAC6-217ENST00000469223 GAKO14976 1311 aa15.83■□□□□ 0.12
HDAC6-217ENST00000469223 MYBBP1AQ9BQG0 1328 aaKnown RBP15.83■□□□□ 0.12
HDAC6-217ENST00000469223 PRRC2BQ5JSZ5 2229 aaKnown RBP15.83■□□□□ 0.12
HDAC6-217ENST00000469223 CDK5RAP2Q96SN8 1893 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 FGFR2P21802 821 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 IGFBP4P22692 258 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 CYP2C19P33261 490 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 TLE2Q04725 743 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 FPGSQ05932 587 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 Q3C1V9 767 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
HDAC6-217ENST00000469223 ANO1Q5XXA6 986 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 FERMT2Q96AC1 680 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 KAZALD1Q96I82 304 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 SMCHD1A6NHR9 2005 aa15.82■□□□□ 0.12
HDAC6-217ENST00000469223 FAM86C2PA6NEL3 165 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 USP17L5A8MUK1 530 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 BMP1P13497 986 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 CYBAP13498 195 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 PBX2P40425 430 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 ADCYAP1R1P41586 468 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 KCNQ1P51787 676 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 TFF2Q03403 129 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 RRP1BQ14684 758 aaKnown RBP15.81■□□□□ 0.12
HDAC6-217ENST00000469223 ARRDC4Q8NCT1 418 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 KLHDC4Q8TBB5 520 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 EDC3Q96F86 508 aaKnown RBP15.81■□□□□ 0.12
HDAC6-217ENST00000469223 TMOD4Q9NZQ9 345 aa15.81■□□□□ 0.12
HDAC6-217ENST00000469223 CXXC1Q9P0U4 656 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-217ENST00000469223 ZDBF2Q9HCK1 2354 aa15.8■□□□□ 0.12
HDAC6-217ENST00000469223 CLTBP09497 229 aa15.8■□□□□ 0.12
HDAC6-217ENST00000469223 SLC5A1P13866 664 aa15.8■□□□□ 0.12
HDAC6-217ENST00000469223 HOXA7P31268 230 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-217ENST00000469223 WDR78Q5VTH9 848 aa15.8■□□□□ 0.12
HDAC6-217ENST00000469223 CCDC129Q6ZRS4 1044 aa15.8■□□□□ 0.12
HDAC6-217ENST00000469223 PBX4Q9BYU1 374 aa15.8■□□□□ 0.12
HDAC6-217ENST00000469223 AS3MTQ9HBK9 375 aa15.8■□□□□ 0.12
HDAC6-217ENST00000469223 GRXCR1A8MXD5 290 aa15.79■□□□□ 0.12
HDAC6-217ENST00000469223 TBC1D12O60347 775 aa15.79■□□□□ 0.12
HDAC6-217ENST00000469223 RAG1P15918 1043 aa15.79■□□□□ 0.12
HDAC6-217ENST00000469223 CAP2P40123 477 aa15.79■□□□□ 0.12
HDAC6-217ENST00000469223 BTDP43251 543 aa15.79■□□□□ 0.12
HDAC6-217ENST00000469223 ATP2B2Q01814 1243 aa15.79■□□□□ 0.12
HDAC6-217ENST00000469223 MICALL1Q8N3F8 863 aa15.79■□□□□ 0.12
HDAC6-217ENST00000469223 BICC1Q9H694 974 aaKnown RBP15.79■□□□□ 0.12
HDAC6-217ENST00000469223 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
HDAC6-217ENST00000469223 SALL1Q9NSC2 1324 aa15.78■□□□□ 0.12
HDAC6-217ENST00000469223 SPTBN4Q9H254 2564 aa15.78■□□□□ 0.12
HDAC6-217ENST00000469223 BACE1P56817 501 aa15.78■□□□□ 0.12
HDAC6-217ENST00000469223 C1orf53Q5VUE5 145 aa15.78■□□□□ 0.12
HDAC6-217ENST00000469223 DZIP1Q86YF9 867 aaKnown RBP15.78■□□□□ 0.12
HDAC6-217ENST00000469223 NPLOC4Q8TAT6 608 aa15.78■□□□□ 0.12
HDAC6-217ENST00000469223 TSPYL2Q9H2G4 693 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-217ENST00000469223 C11orf16Q9NQ32 467 aa15.78■□□□□ 0.12
HDAC6-217ENST00000469223 TACC3Q9Y6A5 838 aa15.78■□□□□ 0.12
HDAC6-217ENST00000469223 SLC15A5A6NIM6 579 aa15.77■□□□□ 0.12
HDAC6-217ENST00000469223 KIAA0355O15063 1070 aa15.77■□□□□ 0.12
HDAC6-217ENST00000469223 PQBP1O60828 265 aaKnown RBP15.77■□□□□ 0.12
HDAC6-217ENST00000469223 GLRX3O76003 335 aaKnown RBP15.77■□□□□ 0.12
HDAC6-217ENST00000469223 MRE11P49959 708 aa15.77■□□□□ 0.12
HDAC6-217ENST00000469223 ANKRD44Q8N8A2 993 aa15.77■□□□□ 0.12
HDAC6-217ENST00000469223 GTF3C2Q8WUA4 911 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-217ENST00000469223 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.77■□□□□ 0.125e-7■■■□□ 15.3
HDAC6-217ENST00000469223 WDR18Q9BV38 432 aa15.77■□□□□ 0.12
HDAC6-217ENST00000469223 CFAP54Q96N23 3096 aa15.76■□□□□ 0.11
HDAC6-217ENST00000469223 CNMDO75829 334 aa15.76■□□□□ 0.11
HDAC6-217ENST00000469223 NBPF7P0C2Y1 421 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-217ENST00000469223 LRRC41Q15345 812 aa15.76■□□□□ 0.11
HDAC6-217ENST00000469223 RABL6Q3YEC7 729 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-217ENST00000469223 LPIN2Q92539 896 aa15.76■□□□□ 0.11
HDAC6-217ENST00000469223 USP34Q70CQ2 3546 aa15.76■□□□□ 0.11
HDAC6-217ENST00000469223 MROH7-TTC4A0A0A0MT08 1334 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms