RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 INCENPQ9NQS7 918 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 RBM27Q9P2N5 1060 aaKnown RBP10.86□□□□□ -0.67
SMC1A-205ENST00000469129 PLIN4Q96Q06 1357 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 MYO3BQ8WXR4 1341 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 PRDM1O75626 825 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 CYP2D6P10635 497 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 XBP1P17861 261 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 KIF5BP33176 963 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 ADD1P35611 737 aaKnown RBP10.85□□□□□ -0.67
SMC1A-205ENST00000469129 FOSBP53539 338 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 RHBDL3P58872 404 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 AKAP17AQ02040 695 aaKnown RBP10.85□□□□□ -0.67
SMC1A-205ENST00000469129 GNL2Q13823 731 aaKnown RBP10.85□□□□□ -0.67
SMC1A-205ENST00000469129 NTRK3Q16288 839 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 DOK7Q18PE1 504 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 CCDC183Q5T5S1 534 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 OLFM4Q6UX06 510 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 C16orf86Q6ZW13 317 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 TTC6Q86TZ1 520 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 CCDC144CPQ8IYA2 1237 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 TTLL6Q8N841 843 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 FANCBQ8NB91 859 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 NLGN2Q8NFZ4 835 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 NKX2-3Q8TAU0 364 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 NUP133Q8WUM0 1156 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 MAP3K14Q99558 947 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 MYL10Q9BUA6 226 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 MRIQ9BWK5 157 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 RNF26Q9BY78 433 aaPredicted RBP10.85□□□□□ -0.67
SMC1A-205ENST00000469129 VPS33BQ9H267 617 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 SENP2Q9HC62 589 aa10.85□□□□□ -0.67
SMC1A-205ENST00000469129 COL2A1P02458 1487 aaPredicted RBP10.85□□□□□ -0.67
SMC1A-205ENST00000469129 USP17L3A6NCW0 530 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 USP17L4A6NCW7 530 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 DTNBO60941 627 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 TSPY3P0CV98 308 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 TSPY8P0CW00 308 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 RXRAP19793 462 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 SAFBQ15424 915 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMC1A-205ENST00000469129 USP17L1Q7RTZ2 530 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 DGKHQ86XP1 1220 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 ZNF444Q8N0Y2 327 aaPredicted RBP10.84□□□□□ -0.67
SMC1A-205ENST00000469129 CERS5Q8N5B7 392 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 LEO1Q8WVC0 666 aaPredicted RBP10.84□□□□□ -0.67
SMC1A-205ENST00000469129 C7orf43Q8WVR3 580 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 PSMD1Q99460 953 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 SLC26A6Q9BXS9 759 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 KAT14Q9H8E8 782 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 DBNDD1Q9H9R9 158 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 TCP11L1Q9NUJ3 509 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 TMEM63CQ9P1W3 806 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 SWAP70Q9UH65 585 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 CD2APQ9Y5K6 639 aa10.84□□□□□ -0.67
SMC1A-205ENST00000469129 F8W031 263 aaPredicted RBP10.83□□□□□ -0.68
SMC1A-205ENST00000469129 PPIP5K2O43314 1243 aa10.83□□□□□ -0.68
SMC1A-205ENST00000469129 GADD45BO75293 160 aaPredicted RBP10.83□□□□□ -0.68
SMC1A-205ENST00000469129 HLA-DOAP06340 250 aa10.83□□□□□ -0.68
SMC1A-205ENST00000469129 GUCY1B3Q02153 619 aa10.83□□□□□ -0.68
SMC1A-205ENST00000469129 KIF23Q02241 960 aaPredicted RBP10.83□□□□□ -0.68
SMC1A-205ENST00000469129 PPP4R3BQ5MIZ7 849 aa10.83□□□□□ -0.68
SMC1A-205ENST00000469129 KRT40Q6A162 431 aa10.83□□□□□ -0.68
SMC1A-205ENST00000469129 ANKS1AQ92625 1134 aa10.83□□□□□ -0.68
SMC1A-205ENST00000469129 PHKBQ93100 1093 aa10.83□□□□□ -0.68
SMC1A-205ENST00000469129 FAM217BQ9NTX9 383 aaPredicted RBP10.83□□□□□ -0.68
SMC1A-205ENST00000469129 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.68
SMC1A-205ENST00000469129 SAP30BPQ9UHR5 308 aaKnown RBP10.83□□□□□ -0.68
SMC1A-205ENST00000469129 DICER1Q9UPY3 1922 aaKnown RBP10.82□□□□□ -0.68
SMC1A-205ENST00000469129 YEATS4O95619 227 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 RASA1P20936 1047 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 CRKP46108 304 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 GNAQP50148 359 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 TGFB2P61812 414 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 TFAP4Q01664 338 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 TROAPQ12815 778 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 AOC3Q16853 763 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 FAM47AQ5JRC9 791 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 DACT2Q5SW24 774 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 MYSM1Q5VVJ2 828 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 LRSAM1Q6UWE0 723 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 TMTC3Q6ZXV5 915 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 CRACR2BQ8N4Y2 399 aaPredicted RBP10.82□□□□□ -0.68
SMC1A-205ENST00000469129 BICD2Q8TD16 824 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 KCNG4Q8TDN1 519 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 ZDHHC15Q96MV8 337 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 GRPEL1Q9HAV7 217 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 DDX19AQ9NUU7 478 aaKnown RBP10.82□□□□□ -0.68
SMC1A-205ENST00000469129 POLR3EQ9NVU0 708 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 SERPINA10Q9UK55 444 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 CNTNAP5Q8WYK1 1306 aa10.82□□□□□ -0.68
SMC1A-205ENST00000469129 ATAD5Q96QE3 1844 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 UTRNP46939 3433 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 SMIM22K7EJ46 135 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 PRPF3O43395 683 aaKnown RBP10.81□□□□□ -0.68
SMC1A-205ENST00000469129 C21orf2O43822 256 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 NPM3O75607 178 aaKnown RBP10.81□□□□□ -0.68
SMC1A-205ENST00000469129 MMP1P03956 469 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 CDK8P49336 464 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 PICALMQ13492 652 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 STK38Q15208 465 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 GPR162Q16538 588 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms