RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 CCDC30Q5VVM6 783 aa13.4□□□□□ -0.26
TRAIP-202ENST00000469027 CCDC174Q6PII3 467 aa13.4□□□□□ -0.26
TRAIP-202ENST00000469027 ZNF280CQ8ND82 737 aa13.4□□□□□ -0.26
TRAIP-202ENST00000469027 NDUFB9Q9Y6M9 179 aa13.4□□□□□ -0.26
TRAIP-202ENST00000469027 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
TRAIP-202ENST00000469027 APBB1O00213 710 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 KIAA0355O15063 1070 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 RGS3P49796 1198 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 CASP7P55210 303 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 HERVK_113P62684 666 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 ERVK-9P63128 1117 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 ERVK-24P63145 666 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 KCNH6Q9H252 994 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 COG5Q9UP83 839 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 REV3LO60673 3130 aa13.39□□□□□ -0.27
TRAIP-202ENST00000469027 PRRC2BQ5JSZ5 2229 aaKnown RBP13.39□□□□□ -0.27
TRAIP-202ENST00000469027 GTPBP6O43824 516 aaPredicted RBP13.38□□□□□ -0.27
TRAIP-202ENST00000469027 GLRX3O76003 335 aaKnown RBP13.38□□□□□ -0.27
TRAIP-202ENST00000469027 C1orf53Q5VUE5 145 aa13.38□□□□□ -0.27
TRAIP-202ENST00000469027 LMBR1LQ6UX01 489 aa13.38□□□□□ -0.27
TRAIP-202ENST00000469027 FBXO33Q7Z6M2 555 aa13.38□□□□□ -0.27
TRAIP-202ENST00000469027 SLC44A5Q8NCS7 719 aa13.38□□□□□ -0.27
TRAIP-202ENST00000469027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■□□□ 13.2
TRAIP-202ENST00000469027 CACNA1GO43497 2377 aa13.38□□□□□ -0.27
TRAIP-202ENST00000469027 PPIGQ13427 754 aaKnown RBP eCLIP13.37□□□□□ -0.271e-8■■■□□ 18.4
TRAIP-202ENST00000469027 Q3C1V9 767 aa13.37□□□□□ -0.27
TRAIP-202ENST00000469027 PPP2R2DQ66LE6 453 aa13.37□□□□□ -0.27
TRAIP-202ENST00000469027 TRPV1Q8NER1 839 aa13.37□□□□□ -0.27
TRAIP-202ENST00000469027 PHOX2BQ99453 314 aa13.37□□□□□ -0.27
TRAIP-202ENST00000469027 CD320Q9NPF0 282 aa13.37□□□□□ -0.27
TRAIP-202ENST00000469027 TMOD4Q9NZQ9 345 aa13.37□□□□□ -0.27
TRAIP-202ENST00000469027 CYBAP13498 195 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 SSTR3P32745 418 aaPredicted RBP13.36□□□□□ -0.27
TRAIP-202ENST00000469027 FOXO4P98177 505 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 LRRC41Q15345 812 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 TMEM240Q5SV17 173 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 HLA-CQ95604 372 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 CHMP4AQ9BY43 222 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 IVNS1ABPQ9Y6Y0 642 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 CHD7Q9P2D1 2997 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 WDFY4Q6ZS81 3184 aa13.36□□□□□ -0.27
TRAIP-202ENST00000469027 DDTLA6NHG4 134 aaPredicted RBP13.35□□□□□ -0.27
TRAIP-202ENST00000469027 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
TRAIP-202ENST00000469027 DCDC2CA8MYV0 355 aa13.35□□□□□ -0.27
TRAIP-202ENST00000469027 ENTPD3O75355 529 aa13.35□□□□□ -0.27
TRAIP-202ENST00000469027 PICALMQ13492 652 aa13.35□□□□□ -0.27
TRAIP-202ENST00000469027 MTMR2Q13614 643 aa13.35□□□□□ -0.27
TRAIP-202ENST00000469027 SH3BP5LQ7L8J4 393 aa13.35□□□□□ -0.27
TRAIP-202ENST00000469027 STK31Q9BXU1 1019 aa13.35□□□□□ -0.27
TRAIP-202ENST00000469027 TBC1D2Q9BYX2 928 aa13.35□□□□□ -0.27
TRAIP-202ENST00000469027 AS3MTQ9HBK9 375 aa13.35□□□□□ -0.27
TRAIP-202ENST00000469027 YBX2Q9Y2T7 364 aaKnown RBP13.35□□□□□ -0.27
TRAIP-202ENST00000469027 USP17L5A8MUK1 530 aa13.34□□□□□ -0.27
TRAIP-202ENST00000469027 ACRP10323 421 aa13.34□□□□□ -0.27
TRAIP-202ENST00000469027 ALADP13716 330 aa13.34□□□□□ -0.27
TRAIP-202ENST00000469027 CCNA1P78396 465 aa13.34□□□□□ -0.27
TRAIP-202ENST00000469027 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
TRAIP-202ENST00000469027 PSRC1Q6PGN9 363 aaPredicted RBP13.34□□□□□ -0.27
TRAIP-202ENST00000469027 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
TRAIP-202ENST00000469027 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
TRAIP-202ENST00000469027 PUS3Q9BZE2 481 aaKnown RBP13.34□□□□□ -0.27
TRAIP-202ENST00000469027 MTIF3Q9H2K0 278 aaKnown RBP13.34□□□□□ -0.27
TRAIP-202ENST00000469027 GBF1Q92538 1859 aa13.33□□□□□ -0.27
TRAIP-202ENST00000469027 CFAP54Q96N23 3096 aa13.33□□□□□ -0.27
TRAIP-202ENST00000469027 SPTBN4Q9H254 2564 aa13.33□□□□□ -0.27
TRAIP-202ENST00000469027 SLC15A5A6NIM6 579 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 SEPT4O43236 478 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 TIMP1P01033 207 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 ZNF853P0CG23 659 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 MAP3K10Q02779 954 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 FAM47AQ5JRC9 791 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 MFSD5Q6N075 450 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 GJD3Q8N144 294 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 NPLOC4Q8TAT6 608 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 GTF3C2Q8WUA4 911 aaPredicted RBP13.33□□□□□ -0.28
TRAIP-202ENST00000469027 RUNDC1Q96C34 613 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 OSBPL5Q9H0X9 879 aaPredicted RBP13.33□□□□□ -0.28
TRAIP-202ENST00000469027 MTCH2Q9Y6C9 303 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 CACNA1BQ00975 2339 aa13.33□□□□□ -0.28
TRAIP-202ENST00000469027 RFXAPO00287 272 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 CSF2RAP15509 400 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 PTPREP23469 700 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 PRDX5P30044 214 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
TRAIP-202ENST00000469027 FAAP100Q0VG06 881 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 RALBP1Q15311 655 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 METTL24Q5JXM2 366 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 RASIP1Q5U651 963 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 C16orf59Q7L2K0 433 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 IDI2Q9BXS1 227 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 PHF24Q9UPV7 400 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 MROH5Q6ZUA9 1318 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 ATAD5Q96QE3 1844 aa13.32□□□□□ -0.28
TRAIP-202ENST00000469027 MYH13Q9UKX3 1938 aa13.31□□□□□ -0.28
TRAIP-202ENST00000469027 LDHBP07195 334 aaKnown RBP13.31□□□□□ -0.28
TRAIP-202ENST00000469027 RABGGTBP53611 331 aa13.31□□□□□ -0.28
TRAIP-202ENST00000469027 EPHA10Q5JZY3 1008 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms