RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
MSX1-202ENST00000468421 METTL16Q86W50 562 aaKnown RBP12.65□□□□□ -0.38
MSX1-202ENST00000468421 CSRNP1Q96S65 589 aa12.65□□□□□ -0.38
MSX1-202ENST00000468421 ADARB2Q9NS39 739 aaKnown RBP12.65□□□□□ -0.38
MSX1-202ENST00000468421 GGA3Q9NZ52 723 aa12.65□□□□□ -0.38
MSX1-202ENST00000468421 PI4KBQ9UBF8 816 aa12.65□□□□□ -0.38
MSX1-202ENST00000468421 DAXXQ9UER7 740 aaPredicted RBP12.65□□□□□ -0.38
MSX1-202ENST00000468421 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
MSX1-202ENST00000468421 BRPF3Q9ULD4 1205 aa12.65□□□□□ -0.38
MSX1-202ENST00000468421 ANGEL1Q9UNK9 670 aaKnown RBP12.65□□□□□ -0.38
MSX1-202ENST00000468421 CEP350Q5VT06 3117 aa12.65□□□□□ -0.38
MSX1-202ENST00000468421 PLIN4Q96Q06 1357 aa12.65□□□□□ -0.38
MSX1-202ENST00000468421 KLF18A0A0U1RQI7 1052 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 TSPY2A6NKD2 308 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 AKR1B1P15121 316 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 EVCP57679 992 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 STK3Q13188 491 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 RASA3Q14644 834 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 ZNF444Q8N0Y2 327 aaPredicted RBP12.64□□□□□ -0.39
MSX1-202ENST00000468421 CRACR2BQ8N4Y2 399 aaPredicted RBP12.64□□□□□ -0.39
MSX1-202ENST00000468421 ENAHQ8N8S7 591 aaPredicted RBP12.64□□□□□ -0.39
MSX1-202ENST00000468421 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
MSX1-202ENST00000468421 TEPSINQ96N21 525 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 ZSCAN10Q96SZ4 725 aaPredicted RBP12.64□□□□□ -0.39
MSX1-202ENST00000468421 UBAC1Q9BSL1 405 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 MTA3Q9BTC8 594 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 IL17RBQ9NRM6 502 aa12.64□□□□□ -0.39
MSX1-202ENST00000468421 POTECB2RU33 542 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 DTNBO60941 627 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 TSPY3P0CV98 308 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 TSPY8P0CW00 308 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
MSX1-202ENST00000468421 LIFRP42702 1097 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 TNNI2P48788 182 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 TNFAIP1Q13829 316 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 RRP1BQ14684 758 aaKnown RBP12.63□□□□□ -0.39
MSX1-202ENST00000468421 WTAPQ15007 396 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 SHROOM1Q2M3G4 852 aaPredicted RBP12.63□□□□□ -0.39
MSX1-202ENST00000468421 RCSD1Q6JBY9 416 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 IQCA1Q86XH1 822 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 RAB11FIP4Q86YS3 637 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 FOXP4Q8IVH2 680 aaPredicted RBP12.63□□□□□ -0.39
MSX1-202ENST00000468421 CCDC83Q8IWF9 413 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
MSX1-202ENST00000468421 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 SH2B1Q9NRF2 756 aaPredicted RBP12.63□□□□□ -0.39
MSX1-202ENST00000468421 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
MSX1-202ENST00000468421 OTOFQ9HC10 1997 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 DOCK1Q14185 1865 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 PAPPA2Q9BXP8 1791 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 SSC5DA1L4H1 1573 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 GOLGA8BA8MQT2 603 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 PFKFB2O60825 505 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 EPHX2P34913 555 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 NT5C2P49902 561 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
MSX1-202ENST00000468421 APOA5Q6Q788 366 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 APOBEC3FQ8IUX4 373 aaKnown RBP12.62□□□□□ -0.39
MSX1-202ENST00000468421 NEDD1Q8NHV4 660 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 GTF3C6Q969F1 213 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 ZNF274Q96GC6 653 aaPredicted RBP12.62□□□□□ -0.39
MSX1-202ENST00000468421 MYL10Q9BUA6 226 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 SLKQ9H2G2 1235 aaPredicted RBP12.62□□□□□ -0.39
MSX1-202ENST00000468421 TCP11L1Q9NUJ3 509 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 NAP1L2Q9ULW6 460 aaPredicted RBP12.62□□□□□ -0.39
MSX1-202ENST00000468421 MYH6P13533 1939 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 PITPNM2Q9BZ72 1349 aa12.62□□□□□ -0.39
MSX1-202ENST00000468421 IGKV6D-41A0A0C4DH26 115 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 ERICH2A1L162 156 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 HSP90AA1P07900 732 aaKnown RBP12.61□□□□□ -0.39
MSX1-202ENST00000468421 RXRAP19793 462 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 CCT2P78371 535 aaKnown RBP12.61□□□□□ -0.39
MSX1-202ENST00000468421 JAG1P78504 1218 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 SCRN1Q12765 414 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 TATDN1Q6P1N9 297 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 NFXL1Q6ZNB6 911 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 CLEC10AQ8IUN9 316 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 DEFB129Q9H1M3 183 aa12.61□□□□□ -0.39
MSX1-202ENST00000468421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
MSX1-202ENST00000468421 NCOA5Q9HCD5 579 aaKnown RBP12.61□□□□□ -0.39
MSX1-202ENST00000468421 HERC5Q9UII4 1024 aaKnown RBP12.61□□□□□ -0.39
MSX1-202ENST00000468421 NID2Q14112 1375 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 CCDC69A6NI79 296 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 GDF11O95390 407 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 MAP3K10Q02779 954 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 CERKLQ49MI3 558 aaPredicted RBP12.6□□□□□ -0.39
MSX1-202ENST00000468421 IFIT1BQ5T764 474 aaKnown RBP12.6□□□□□ -0.39
MSX1-202ENST00000468421 NBPF12Q5TAG4 269 aaPredicted RBP12.6□□□□□ -0.39
MSX1-202ENST00000468421 PRAMEF18Q5VWM3 479 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 USP50Q70EL3 339 aaPredicted RBP12.6□□□□□ -0.39
MSX1-202ENST00000468421 MIGA2Q7L4E1 593 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 MICU3Q86XE3 530 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 ZNF654Q8IZM8 581 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 ANKS1AQ92625 1134 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 CEP95Q96GE4 821 aa12.6□□□□□ -0.39
MSX1-202ENST00000468421 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms