RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PDE6AP16499 860 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 OSBPP22059 807 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 DYNLL1P63167 89 aaKnown RBP13.53□□□□□ -0.24
COL4A6-205ENST00000468338 HIC1Q14526 733 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
COL4A6-205ENST00000468338 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
COL4A6-205ENST00000468338 TGFBRAP1Q8WUH2 860 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
COL4A6-205ENST00000468338 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 DDRGK1Q96HY6 314 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 DHX36Q9H2U1 1008 aaKnown RBP13.53□□□□□ -0.24
COL4A6-205ENST00000468338 ECHDC1Q9NTX5 307 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 PAG1Q9NWQ8 432 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 FLT1P17948 1338 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 SLC9C2Q5TAH2 1124 aa13.52□□□□□ -0.25
COL4A6-205ENST00000468338 SCYL3Q8IZE3 742 aa13.52□□□□□ -0.25
COL4A6-205ENST00000468338 DNAJC2Q99543 621 aaKnown RBP13.52□□□□□ -0.25
COL4A6-205ENST00000468338 ZCCHC17Q9NP64 241 aaKnown RBP13.52□□□□□ -0.25
COL4A6-205ENST00000468338 PI4KBQ9UBF8 816 aa13.52□□□□□ -0.25
COL4A6-205ENST00000468338 HERC5Q9UII4 1024 aaKnown RBP13.52□□□□□ -0.25
COL4A6-205ENST00000468338 PHIPQ8WWQ0 1821 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 CCL15-CCL14A0A0B4J2E2 113 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 GPR25O00155 361 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 PTPRAP18433 802 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 ADD2P35612 726 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 SNAPC2Q13487 334 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 CCL15Q16663 113 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 OTUD7BQ6GQQ9 843 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 FOXP4Q8IVH2 680 aaPredicted RBP13.51□□□□□ -0.25
COL4A6-205ENST00000468338 MAPKAPK5Q8IW41 473 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 MIGA1Q8NAN2 632 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 OXER1Q8TDS5 423 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 FAM117AQ9C073 453 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 MYH1P12882 1939 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 MYH7P12883 1935 aa13.51□□□□□ -0.25
COL4A6-205ENST00000468338 DOCK1Q14185 1865 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 SALL3Q9BXA9 1300 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 ZNF532Q9HCE3 1301 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 CXCL11O14625 94 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 CETPP11597 493 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 MOGSQ13724 837 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 RRP1BQ14684 758 aaKnown RBP13.5□□□□□ -0.25
COL4A6-205ENST00000468338 FAM43AQ8N2R8 423 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 ZNF296Q8WUU4 475 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-205ENST00000468338 GCC1Q96CN9 775 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 ZMYND15Q9H091 742 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 DNAJC18Q9H819 358 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL4A6-205ENST00000468338 PTPRFP10586 1907 aa13.5□□□□□ -0.25
COL4A6-205ENST00000468338 TTC41PQ6P2S7 1318 aa13.49□□□□□ -0.25
COL4A6-205ENST00000468338 FAM196BA6NMK8 535 aa13.49□□□□□ -0.25
COL4A6-205ENST00000468338 CRHR2Q13324 411 aa13.49□□□□□ -0.25
COL4A6-205ENST00000468338 UBE3CQ15386 1083 aa13.49□□□□□ -0.25
COL4A6-205ENST00000468338 AMHR2Q16671 573 aa13.49□□□□□ -0.25
COL4A6-205ENST00000468338 DDX12PQ92771 950 aa13.49□□□□□ -0.25
COL4A6-205ENST00000468338 BCL11AQ9H165 835 aa13.49□□□□□ -0.25
COL4A6-205ENST00000468338 PALD1Q9ULE6 856 aa13.49□□□□□ -0.25
COL4A6-205ENST00000468338 AFG3L2Q9Y4W6 797 aa13.49□□□□□ -0.25
COL4A6-205ENST00000468338 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
COL4A6-205ENST00000468338 DDX60LQ5H9U9 1706 aaKnown RBP13.48□□□□□ -0.25
COL4A6-205ENST00000468338 MAGEB6P1A0A0J9YX57 407 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 BTBD19C9JJ37 291 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 CAP2P40123 477 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 EXOC6Q8TAG9 804 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 PI4K2BQ8TCG2 481 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 OTUD7AQ8TE49 926 aaPredicted RBP13.48□□□□□ -0.25
COL4A6-205ENST00000468338 GPATCH3Q96I76 525 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL4A6-205ENST00000468338 EHD4Q9H223 541 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 PICK1Q9NRD5 415 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 ZHX2Q9Y6X8 837 aa13.48□□□□□ -0.25
COL4A6-205ENST00000468338 A0A0G2JLL6 359 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-205ENST00000468338 FKTNO75072 461 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 CHGBP05060 677 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 USP5P45974 858 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 SLFNL1Q499Z3 407 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 TSHZ3Q63HK5 1081 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 PRRT2Q7Z6L0 340 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-205ENST00000468338 CTU1Q7Z7A3 348 aaKnown RBP13.47□□□□□ -0.25
COL4A6-205ENST00000468338 ANKRD23Q86SG2 305 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 LCORLQ8N3X6 602 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 KBTBD3Q8NAB2 608 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 ABHD8Q96I13 439 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 MCOLN1Q9GZU1 580 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 ATAD5Q96QE3 1844 aa13.47□□□□□ -0.25
COL4A6-205ENST00000468338 JAG1P78504 1218 aa13.46□□□□□ -0.25
COL4A6-205ENST00000468338 DGKZQ13574 1117 aa13.46□□□□□ -0.25
COL4A6-205ENST00000468338 GPAT2Q6NUI2 795 aa13.46□□□□□ -0.25
COL4A6-205ENST00000468338 TATDN1Q6P1N9 297 aa13.46□□□□□ -0.25
COL4A6-205ENST00000468338 TBC1D2Q9BYX2 928 aa13.46□□□□□ -0.25
COL4A6-205ENST00000468338 CRNKL1Q9BZJ0 848 aaKnown RBP13.46□□□□□ -0.25
COL4A6-205ENST00000468338 DCP1AQ9NPI6 582 aaPredicted RBP13.46□□□□□ -0.25
COL4A6-205ENST00000468338 GINM1Q9NU53 330 aa13.46□□□□□ -0.25
COL4A6-205ENST00000468338 STAP2Q9UGK3 403 aa13.46□□□□□ -0.25
COL4A6-205ENST00000468338 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.25
COL4A6-205ENST00000468338 ERC2O15083 957 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 EVI5O60447 810 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 TLR2O60603 784 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms