RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 DDX60LQ5H9U9 1706 aaKnown RBP20.66■□□□□ 0.9
SSBP1-207ENST00000468267 LOC285556D6RIA3 1793 aa20.66■□□□□ 0.9
SSBP1-207ENST00000468267 GDF11O95390 407 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 GNRH1P01148 92 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 POLR3DP05423 398 aaPredicted RBP20.65■□□□□ 0.9
SSBP1-207ENST00000468267 BCRP11274 1271 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 PLCD1P51178 756 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 HMGCS2P54868 508 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 SOX10P56693 466 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 SHROOM1Q2M3G4 852 aaPredicted RBP20.65■□□□□ 0.9
SSBP1-207ENST00000468267 SH3D19Q5HYK7 790 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 TREML2Q5T2D2 321 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 ZSCAN25Q6NSZ9 544 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 ARMT1Q9H993 441 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 ZBTB21Q9ULJ3 1066 aa20.65■□□□□ 0.9
SSBP1-207ENST00000468267 MBD4O95243 580 aa20.64■□□□□ 0.89
SSBP1-207ENST00000468267 TSHZ3Q63HK5 1081 aa20.64■□□□□ 0.89
SSBP1-207ENST00000468267 SDR42E1Q8WUS8 393 aa20.64■□□□□ 0.89
SSBP1-207ENST00000468267 DCP1AQ9NPI6 582 aaPredicted RBP20.64■□□□□ 0.89
SSBP1-207ENST00000468267 MCM9Q9NXL9 1143 aa20.64■□□□□ 0.89
SSBP1-207ENST00000468267 BRCA2P51587 3418 aa20.63■□□□□ 0.89
SSBP1-207ENST00000468267 BAZ2AQ9UIF9 1905 aaKnown RBP20.63■□□□□ 0.89
SSBP1-207ENST00000468267 CHGBP05060 677 aa20.63■□□□□ 0.89
SSBP1-207ENST00000468267 CTGFP29279 349 aa20.63■□□□□ 0.89
SSBP1-207ENST00000468267 BACE1P56817 501 aa20.63■□□□□ 0.89
SSBP1-207ENST00000468267 MLLT1Q03111 559 aaPredicted RBP20.63■□□□□ 0.89
SSBP1-207ENST00000468267 MGAMO43451 1857 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 GH2P01242 217 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 SHMT1P34896 483 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 PSMC4P43686 418 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 GABPAQ06546 454 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 HDAC1Q13547 482 aaPredicted RBP20.62■□□□□ 0.89
SSBP1-207ENST00000468267 AAMPQ13685 434 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 CERKLQ49MI3 558 aaPredicted RBP20.62■□□□□ 0.89
SSBP1-207ENST00000468267 KBTBD3Q8NAB2 608 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 TRIM47Q96LD4 638 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 ATP8A2Q9NTI2 1148 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 PNMA3Q9UL41 463 aa20.62■□□□□ 0.89
SSBP1-207ENST00000468267 TTC41PQ6P2S7 1318 aa20.61■□□□□ 0.89
SSBP1-207ENST00000468267 C19orf81C9J6K1 198 aa20.61■□□□□ 0.89
SSBP1-207ENST00000468267 USP17L10C9JJH3 530 aa20.61■□□□□ 0.89
SSBP1-207ENST00000468267 PRKAB2O43741 272 aa20.61■□□□□ 0.89
SSBP1-207ENST00000468267 PABPC4Q13310 644 aaKnown RBP eCLIP20.61■□□□□ 0.89
SSBP1-207ENST00000468267 MTMR2Q13614 643 aa20.61■□□□□ 0.89
SSBP1-207ENST00000468267 SMCR8Q8TEV9 937 aaPredicted RBP20.61■□□□□ 0.89
SSBP1-207ENST00000468267 ARMC5Q96C12 935 aa20.61■□□□□ 0.89
SSBP1-207ENST00000468267 PTCH2Q9Y6C5 1203 aa20.61■□□□□ 0.89
SSBP1-207ENST00000468267 PDE4DIPQ5VU43 2346 aa20.61■□□□□ 0.89
SSBP1-207ENST00000468267 DOCK3Q8IZD9 2030 aa20.6■□□□□ 0.89
SSBP1-207ENST00000468267 PRMT2P55345 433 aa20.6■□□□□ 0.89
SSBP1-207ENST00000468267 EVX2Q03828 476 aa20.6■□□□□ 0.89
SSBP1-207ENST00000468267 ABCB5Q2M3G0 1257 aa20.6■□□□□ 0.89
SSBP1-207ENST00000468267 OTUD7AQ8TE49 926 aaPredicted RBP20.6■□□□□ 0.89
SSBP1-207ENST00000468267 PUS7LQ9H0K6 701 aaKnown RBP20.6■□□□□ 0.89
SSBP1-207ENST00000468267 TMOD4Q9NZQ9 345 aa20.6■□□□□ 0.89
SSBP1-207ENST00000468267 ERC2O15083 957 aa20.59■□□□□ 0.89
SSBP1-207ENST00000468267 ECM2O94769 699 aaPredicted RBP20.59■□□□□ 0.89
SSBP1-207ENST00000468267 FMNL1O95466 1100 aaPredicted RBP20.59■□□□□ 0.89
SSBP1-207ENST00000468267 CYP2D6P10635 497 aa20.59■□□□□ 0.89
SSBP1-207ENST00000468267 OSBPP22059 807 aa20.59■□□□□ 0.89
SSBP1-207ENST00000468267 HOXD10P28358 340 aa20.59■□□□□ 0.89
SSBP1-207ENST00000468267 PI4K2BQ8TCG2 481 aa20.59■□□□□ 0.89
SSBP1-207ENST00000468267 GCC1Q96CN9 775 aa20.59■□□□□ 0.89
SSBP1-207ENST00000468267 ASCC2Q9H1I8 757 aaPredicted RBP20.59■□□□□ 0.89
SSBP1-207ENST00000468267 SRRDQ9UH36 339 aa20.59■□□□□ 0.89
SSBP1-207ENST00000468267 TAOK2Q9UL54 1235 aa20.59■□□□□ 0.89
SSBP1-207ENST00000468267 MKI67P46013 3256 aaKnown RBP20.59■□□□□ 0.89
SSBP1-207ENST00000468267 MYH8P13535 1937 aa20.59■□□□□ 0.89
SSBP1-207ENST00000468267 RNF113AO15541 343 aaKnown RBP20.58■□□□□ 0.89
SSBP1-207ENST00000468267 HOXA7P31268 230 aaPredicted RBP20.58■□□□□ 0.89
SSBP1-207ENST00000468267 SLC9C1Q4G0N8 1177 aa20.58■□□□□ 0.89
SSBP1-207ENST00000468267 ANKRD45Q5TZF3 282 aa20.58■□□□□ 0.89
SSBP1-207ENST00000468267 CABP5Q9NP86 173 aa20.58■□□□□ 0.89
SSBP1-207ENST00000468267 SLC4A4Q9Y6R1 1079 aa20.58■□□□□ 0.89
SSBP1-207ENST00000468267 GLRX3O76003 335 aaKnown RBP20.57■□□□□ 0.88
SSBP1-207ENST00000468267 GCLCP48506 637 aaPredicted RBP20.57■□□□□ 0.88
SSBP1-207ENST00000468267 FCGRTP55899 365 aa20.57■□□□□ 0.88
SSBP1-207ENST00000468267 RAB3GAP1Q15042 981 aa20.57■□□□□ 0.88
SSBP1-207ENST00000468267 USP17L2Q6R6M4 530 aa20.57■□□□□ 0.88
SSBP1-207ENST00000468267 NBPF11Q86T75 865 aa20.57■□□□□ 0.88
SSBP1-207ENST00000468267 ANKRD13CQ8N6S4 541 aa20.57■□□□□ 0.88
SSBP1-207ENST00000468267 STRBPQ96SI9 672 aaKnown RBP20.57■□□□□ 0.88
SSBP1-207ENST00000468267 EMILIN3Q9NT22 766 aa20.57■□□□□ 0.88
SSBP1-207ENST00000468267 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
SSBP1-207ENST00000468267 SALL3Q9BXA9 1300 aa20.56■□□□□ 0.88
SSBP1-207ENST00000468267 ZFYP08048 801 aaPredicted RBP20.56■□□□□ 0.88
SSBP1-207ENST00000468267 MX1P20591 662 aa20.56■□□□□ 0.88
SSBP1-207ENST00000468267 GUCY1A2P33402 732 aa20.56■□□□□ 0.88
SSBP1-207ENST00000468267 C12orf60Q5U649 245 aa20.56■□□□□ 0.88
SSBP1-207ENST00000468267 OSBP2Q969R2 916 aa20.56■□□□□ 0.88
SSBP1-207ENST00000468267 DDRGK1Q96HY6 314 aa20.56■□□□□ 0.88
SSBP1-207ENST00000468267 ZNF333Q96JL9 665 aa20.56■□□□□ 0.88
SSBP1-207ENST00000468267 SWAP70Q9UH65 585 aa20.56■□□□□ 0.88
SSBP1-207ENST00000468267 USP17L12C9JPN9 530 aa20.55■□□□□ 0.88
SSBP1-207ENST00000468267 USP17L21D6R901 530 aa20.55■□□□□ 0.88
SSBP1-207ENST00000468267 FAM110CQ1W6H9 321 aa20.55■□□□□ 0.88
SSBP1-207ENST00000468267 AMOTL1Q8IY63 956 aa20.55■□□□□ 0.88
SSBP1-207ENST00000468267 APPBP2Q92624 585 aa20.55■□□□□ 0.88
SSBP1-207ENST00000468267 DYNLL2Q96FJ2 89 aa20.55■□□□□ 0.88
SSBP1-207ENST00000468267 MYPNQ86TC9 1320 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms