RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 PTH1RQ03431 593 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 NMIQ13287 307 aaPredicted RBP6.15□□□□□ -1.42
RIF1-209ENST00000467762 MCMDC2Q4G0Z9 681 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.15□□□□□ -1.42
RIF1-209ENST00000467762 TEX2Q8IWB9 1127 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 FBXL16Q8N461 479 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 SLC43A3Q8NBI5 491 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 PLBD2Q8NHP8 589 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 FAM200AQ8TCP9 573 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 PIBF1Q8WXW3 757 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 EAF2Q96CJ1 260 aaPredicted RBP6.15□□□□□ -1.42
RIF1-209ENST00000467762 SUCLG2Q96I99 432 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 SPACA7Q96KW9 195 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 ASB16Q96NS5 453 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 NEK1Q96PY6 1258 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 HAUS7Q99871 368 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 FSD1Q9BTV5 496 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 FUCA2Q9BTY2 467 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 CCSER2Q9H7U1 834 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 IQSEC3Q9UPP2 1182 aaPredicted RBP6.15□□□□□ -1.42
RIF1-209ENST00000467762 CNPY2Q9Y2B0 182 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 PKD1L3Q7Z443 1732 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 PARP4Q9UKK3 1724 aaKnown RBP6.15□□□□□ -1.42
RIF1-209ENST00000467762 AFDNP55196 1824 aaKnown RBP6.15□□□□□ -1.43
RIF1-209ENST00000467762 COL18A1P39060 1754 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 RGPD5Q99666 1765 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 FAM196BA6NMK8 535 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 NEMFO60524 1076 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 GADD45BO75293 160 aaPredicted RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 TAF5LO75529 589 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 CIAO1O76071 339 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 MAP4K4O95819 1239 aaPredicted RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 ABL1P00519 1130 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 IGKV5-2P06315 115 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 ITGA6P23229 1130 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 IL15P40933 162 aaPredicted RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 RNF144AP50876 292 aaPredicted RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 CHAF1AQ13111 956 aaPredicted RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 MAP3K11Q16584 847 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 ME3Q16798 604 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 RNF187Q5TA31 235 aaPredicted RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 SOGA3Q5TF21 947 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 NAA16Q6N069 864 aaPredicted RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 RBM43Q6ZSC3 357 aaKnown RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 LYSMD3Q7Z3D4 306 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 PRICKLE2Q7Z3G6 844 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 CCDC83Q8IWF9 413 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 LRRC59Q96AG4 307 aaKnown RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 VTI1AQ96AJ9 217 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 KAZALD1Q96I82 304 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 ZNF396Q96N95 335 aaPredicted RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 DSCC1Q9BVC3 393 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 NUP62CLQ9H1M0 184 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 ZSWIM4Q9H7M6 989 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 CAPN10Q9HC96 672 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 ARHGEF10LQ9HCE6 1279 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 SPTLC3Q9NUV7 552 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 EGFL7Q9UHF1 273 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 CTNNA3Q9UI47 895 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 NSFL1CQ9UNZ2 370 aaKnown RBP6.14□□□□□ -1.43
RIF1-209ENST00000467762 SH3TC1Q8TE82 1336 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 CPDO75976 1380 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 ABCC12Q96J65 1359 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 C1orf167Q5SNV9 1468 aa6.14□□□□□ -1.43
RIF1-209ENST00000467762 CDC14CA4D256 554 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 VPS37CA5D8V6 355 aaPredicted RBP6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L3A6NCW0 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L4A6NCW7 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 ERVV-2B6SEH9 535 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L15C9J2P7 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L10C9JJH3 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L13C9JLJ4 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L12C9JPN9 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L11C9JVI0 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L21D6R901 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L18D6R9N7 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L22D6RA61 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L17D6RBQ6 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L19D6RCP7 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L20D6RJB6 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 H3BRB1 525 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 PEX14O75381 377 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 ADCY5O95622 1261 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 ZFYP08048 801 aaPredicted RBP6.13□□□□□ -1.43
RIF1-209ENST00000467762 ATF3P18847 181 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L24Q0WX57 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 CWF19L2Q2TBE0 894 aaKnown RBP6.13□□□□□ -1.43
RIF1-209ENST00000467762 ADCK5Q3MIX3 580 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 TNNI3KQ59H18 835 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L2Q6R6M4 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 COPS6Q7L5N1 327 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 USP17L1Q7RTZ2 530 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 CYP2U1Q7Z449 544 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 NT5DC4Q86YG4 428 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 GLYCTKQ8IVS8 523 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 KBTBD3Q8NAB2 608 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 NFATC2IPQ8NCF5 419 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 CCDC191Q8NCU4 936 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 XAGE3Q8WTP9 111 aa6.13□□□□□ -1.43
RIF1-209ENST00000467762 NANOS1Q8WY41 292 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms