RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 DRC7Q8IY82 874 aa20.33■□□□□ 0.84
NELFA-213ENST00000467661 DIS3L2Q8IYB7 885 aaKnown RBP20.33■□□□□ 0.84
NELFA-213ENST00000467661 ENAHQ8N8S7 591 aaPredicted RBP20.33■□□□□ 0.84
NELFA-213ENST00000467661 WDR66Q8TBY9 1149 aa20.33■□□□□ 0.84
NELFA-213ENST00000467661 ZNF830Q96NB3 372 aaPredicted RBP20.33■□□□□ 0.84
NELFA-213ENST00000467661 AATFQ9NY61 560 aaKnown RBP eCLIP20.33■□□□□ 0.84
NELFA-213ENST00000467661 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.33■□□□□ 0.84
NELFA-213ENST00000467661 TAOK2Q9UL54 1235 aa20.33■□□□□ 0.84
NELFA-213ENST00000467661 XDHP47989 1333 aa20.32■□□□□ 0.84
NELFA-213ENST00000467661 FAM237AA0A1B0GTK4 181 aa20.32■□□□□ 0.84
NELFA-213ENST00000467661 USP17L12C9JPN9 530 aa20.32■□□□□ 0.84
NELFA-213ENST00000467661 USP17L21D6R901 530 aa20.32■□□□□ 0.84
NELFA-213ENST00000467661 WDHD1O75717 1129 aaPredicted RBP20.32■□□□□ 0.84
NELFA-213ENST00000467661 DDAH1O94760 285 aa20.32■□□□□ 0.84
NELFA-213ENST00000467661 SYKP43405 635 aa20.32■□□□□ 0.84
NELFA-213ENST00000467661 RILPL1Q5EBL4 403 aa20.32■□□□□ 0.84
NELFA-213ENST00000467661 MPNDQ8N594 471 aa20.32■□□□□ 0.84
NELFA-213ENST00000467661 DCP1AQ9NPI6 582 aaPredicted RBP20.32■□□□□ 0.84
NELFA-213ENST00000467661 UBR3Q6ZT12 1888 aa20.32■□□□□ 0.84
NELFA-213ENST00000467661 PRDX5P30044 214 aa20.31■□□□□ 0.84
NELFA-213ENST00000467661 GUCY1A2P33402 732 aa20.31■□□□□ 0.84
NELFA-213ENST00000467661 ZNF804AQ7Z570 1209 aa20.31■□□□□ 0.84
NELFA-213ENST00000467661 BPIFA3Q9BQP9 254 aa20.31■□□□□ 0.84
NELFA-213ENST00000467661 HPSEQ9Y251 543 aa20.31■□□□□ 0.84
NELFA-213ENST00000467661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.31■□□□□ 0.84
NELFA-213ENST00000467661 MROH7-TTC4A0A0A0MT08 1334 aa20.31■□□□□ 0.84
NELFA-213ENST00000467661 CYP2D7A0A087X1C5 515 aa20.3■□□□□ 0.84
NELFA-213ENST00000467661 GSTO1P78417 241 aa20.3■□□□□ 0.84
NELFA-213ENST00000467661 PDE4BQ07343 736 aa20.3■□□□□ 0.84
NELFA-213ENST00000467661 RESP18Q5W5W9 173 aa20.3■□□□□ 0.84
NELFA-213ENST00000467661 CEP131Q9UPN4 1083 aa20.3■□□□□ 0.84
NELFA-213ENST00000467661 BTBD18B2RXH4 712 aa20.3■□□□□ 0.84
NELFA-213ENST00000467661 ST5P78524 1137 aa20.3■□□□□ 0.84
NELFA-213ENST00000467661 C15orf52Q6ZUT6 534 aaKnown RBP20.3■□□□□ 0.84
NELFA-213ENST00000467661 RPGRQ92834 1020 aaKnown RBP20.3■□□□□ 0.84
NELFA-213ENST00000467661 MRFAP1L1Q96HT8 127 aa20.3■□□□□ 0.84
NELFA-213ENST00000467661 PRPF3O43395 683 aaKnown RBP20.29■□□□□ 0.84
NELFA-213ENST00000467661 LDHBP07195 334 aaKnown RBP20.29■□□□□ 0.84
NELFA-213ENST00000467661 NLRP12P59046 1061 aa20.29■□□□□ 0.84
NELFA-213ENST00000467661 NOLC1Q14978 699 aaKnown RBP eCLIP20.29■□□□□ 0.84
NELFA-213ENST00000467661 TXNRD3Q86VQ6 643 aa20.29■□□□□ 0.84
NELFA-213ENST00000467661 DHX40Q8IX18 779 aaKnown RBP20.29■□□□□ 0.84
NELFA-213ENST00000467661 CCDC82Q8N4S0 544 aa20.29■□□□□ 0.84
NELFA-213ENST00000467661 KRI1Q8N9T8 703 aaKnown RBP20.29■□□□□ 0.84
NELFA-213ENST00000467661 KCNJ14Q9UNX9 436 aa20.29■□□□□ 0.84
NELFA-213ENST00000467661 UBE2Q2LH0YL09 131 aa20.28■□□□□ 0.84
NELFA-213ENST00000467661 SHC4Q6S5L8 630 aa20.28■□□□□ 0.84
NELFA-213ENST00000467661 CLIP2Q9UDT6 1046 aa20.28■□□□□ 0.84
NELFA-213ENST00000467661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.27■□□□□ 0.84
NELFA-213ENST00000467661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.27■□□□□ 0.84
NELFA-213ENST00000467661 PRDM1O75626 825 aa20.27■□□□□ 0.84
NELFA-213ENST00000467661 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
NELFA-213ENST00000467661 TPM4P67936 248 aa20.27■□□□□ 0.84
NELFA-213ENST00000467661 PRR5LQ6MZQ0 368 aa20.27■□□□□ 0.84
NELFA-213ENST00000467661 CERS3Q8IU89 383 aa20.27■□□□□ 0.84
NELFA-213ENST00000467661 NOL10Q9BSC4 688 aaKnown RBP20.27■□□□□ 0.84
NELFA-213ENST00000467661 KCNF1Q9H3M0 494 aa20.27■□□□□ 0.84
NELFA-213ENST00000467661 SPTLC3Q9NUV7 552 aa20.27■□□□□ 0.84
NELFA-213ENST00000467661 R3HCC1Q9Y3T6 440 aaKnown RBP20.27■□□□□ 0.84
NELFA-213ENST00000467661 TROAPQ12815 778 aa20.27■□□□□ 0.83
NELFA-213ENST00000467661 AMOTL1Q8IY63 956 aa20.27■□□□□ 0.83
NELFA-213ENST00000467661 CMTR1Q8N1G2 835 aaKnown RBP20.27■□□□□ 0.83
NELFA-213ENST00000467661 AOPEPQ8N6M6 819 aa20.27■□□□□ 0.83
NELFA-213ENST00000467661 CTCFLQ8NI51 663 aaPredicted RBP20.27■□□□□ 0.83
NELFA-213ENST00000467661 BRMS1Q9HCU9 246 aa20.27■□□□□ 0.83
NELFA-213ENST00000467661 HOOK1Q9UJC3 728 aaKnown RBP20.27■□□□□ 0.83
NELFA-213ENST00000467661 SMTNL1A8MU46 457 aa20.26■□□□□ 0.83
NELFA-213ENST00000467661 SMIM22K7EJ46 135 aa20.26■□□□□ 0.83
NELFA-213ENST00000467661 BAG3O95817 575 aa20.26■□□□□ 0.83
NELFA-213ENST00000467661 LDHCP07864 332 aa20.26■□□□□ 0.83
NELFA-213ENST00000467661 PTGS1P23219 599 aa20.26■□□□□ 0.83
NELFA-213ENST00000467661 ELOA2Q8IYF1 753 aaPredicted RBP20.26■□□□□ 0.83
NELFA-213ENST00000467661 RBM17Q96I25 401 aaKnown RBP20.26■□□□□ 0.83
NELFA-213ENST00000467661 FAM13BQ9NYF5 915 aa20.26■□□□□ 0.83
NELFA-213ENST00000467661 MORC2Q9Y6X9 1032 aaPredicted RBP20.26■□□□□ 0.83
NELFA-213ENST00000467661 QSER1Q2KHR3 1735 aa20.26■□□□□ 0.83
NELFA-213ENST00000467661 KRT2P35908 639 aa20.25■□□□□ 0.83
NELFA-213ENST00000467661 DNTTIP2Q5QJE6 756 aaKnown RBP20.25■□□□□ 0.83
NELFA-213ENST00000467661 CCDC186Q7Z3E2 898 aa20.25■□□□□ 0.83
NELFA-213ENST00000467661 KIAA1524Q8TCG1 905 aa20.25■□□□□ 0.83
NELFA-213ENST00000467661 ERCC4Q92889 916 aaPredicted RBP20.25■□□□□ 0.83
NELFA-213ENST00000467661 NAV1Q8NEY1 1877 aa20.25■□□□□ 0.83
NELFA-213ENST00000467661 ATP2B4P23634 1241 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 USP5P45974 858 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 TOB1P50616 345 aaPredicted RBP20.24■□□□□ 0.83
NELFA-213ENST00000467661 FUT2Q10981 343 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 CCDC178Q5BJE1 867 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 TMTC3Q6ZXV5 915 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 ZNF579Q8NAF0 562 aaKnown RBP20.24■□□□□ 0.83
NELFA-213ENST00000467661 MCM9Q9NXL9 1143 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 TUBE1Q9UJT0 475 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 KCNH3Q9ULD8 1083 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 TSPY2A6NKD2 308 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 PTPREP23469 700 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 DPCR1Q3MIW9 517 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 CRY2Q49AN0 593 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 AKT1S1Q96B36 256 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 CLIC6Q96NY7 704 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 PHF20Q9BVI0 1012 aa20.24■□□□□ 0.83
NELFA-213ENST00000467661 ROBO3Q96MS0 1386 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms