RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 SYNE3Q6ZMZ3 975 aa11.89□□□□□ -0.51
CDCA7-206ENST00000467411 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
CDCA7-206ENST00000467411 C8orf76Q96K31 380 aa11.89□□□□□ -0.51
CDCA7-206ENST00000467411 ATRNL1Q5VV63 1379 aa11.89□□□□□ -0.51
CDCA7-206ENST00000467411 DEXIO95424 95 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 CCDC93Q567U6 631 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 IFIT1BQ5T764 474 aaKnown RBP11.88□□□□□ -0.51
CDCA7-206ENST00000467411 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 NEDD1Q8NHV4 660 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 POLR3EQ9NVU0 708 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 CPLX1O14810 134 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 DTNBO60941 627 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 IARSP41252 1262 aaKnown RBP11.88□□□□□ -0.51
CDCA7-206ENST00000467411 SSRP1Q08945 709 aaKnown RBP11.88□□□□□ -0.51
CDCA7-206ENST00000467411 PKN1Q16512 942 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 DOK7Q18PE1 504 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 RBM43Q6ZSC3 357 aaKnown RBP11.88□□□□□ -0.51
CDCA7-206ENST00000467411 TMTC3Q6ZXV5 915 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 AMOTL1Q8IY63 956 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 GMLQ99445 158 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 MTFR1LQ9H019 292 aa11.88□□□□□ -0.51
CDCA7-206ENST00000467411 YDJCA8MPS7 323 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 SMARCA1P28370 1054 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 MMP14P50281 582 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 L1TD1Q5T7N2 865 aaKnown RBP11.87□□□□□ -0.51
CDCA7-206ENST00000467411 CDC42EP5Q6NZY7 148 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 MICU3Q86XE3 530 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 TEKT1Q969V4 418 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 SWAP70Q9UH65 585 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 DICER1Q9UPY3 1922 aaKnown RBP11.87□□□□□ -0.51
CDCA7-206ENST00000467411 CNTNAP5Q8WYK1 1306 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 LETM1O95202 739 aaPredicted RBP11.87□□□□□ -0.51
CDCA7-206ENST00000467411 CRKP46108 304 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 CDK8P49336 464 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 RRP12Q5JTH9 1297 aaKnown RBP11.87□□□□□ -0.51
CDCA7-206ENST00000467411 CATIPQ7Z7H3 387 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 GAS2L3Q86XJ1 694 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 ZNF396Q96N95 335 aaPredicted RBP11.87□□□□□ -0.51
CDCA7-206ENST00000467411 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 DDX4Q9NQI0 724 aaKnown RBP11.87□□□□□ -0.51
CDCA7-206ENST00000467411 TTF2Q9UNY4 1162 aaKnown RBP11.87□□□□□ -0.51
CDCA7-206ENST00000467411 LTBP3Q9NS15 1303 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 KIF28PB7ZC32 967 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 VIL1P09327 827 aaKnown RBP11.87□□□□□ -0.51
CDCA7-206ENST00000467411 DPEP1P16444 411 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 GRM4Q14833 912 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 LRSAM1Q6UWE0 723 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 MAPKAPK5Q8IW41 473 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 MTMR14Q8NCE2 650 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 OSBPL5Q9H0X9 879 aaPredicted RBP11.87□□□□□ -0.51
CDCA7-206ENST00000467411 GDPD2Q9HCC8 539 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 KCNQ5Q9NR82 932 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 MYH4Q9Y623 1939 aa11.87□□□□□ -0.51
CDCA7-206ENST00000467411 MMP1P03956 469 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 CAVIN1Q6NZI2 390 aaKnown RBP11.86□□□□□ -0.51
CDCA7-206ENST00000467411 SYAP1Q96A49 352 aaPredicted RBP11.86□□□□□ -0.51
CDCA7-206ENST00000467411 SHISA4Q96DD7 197 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 FOXP1Q9H334 677 aaPredicted RBP11.86□□□□□ -0.51
CDCA7-206ENST00000467411 YEATS4O95619 227 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 AOC3Q16853 763 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 CCDC183Q5T5S1 534 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 KRT40Q6A162 431 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 DYNLL2Q96FJ2 89 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 PGBD1Q96JS3 809 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 FUCA2Q9BTY2 467 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDCA7-206ENST00000467411 DBNDD1Q9H9R9 158 aa11.86□□□□□ -0.51
CDCA7-206ENST00000467411 GOLGA6L3A6NEY3 463 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 PRDM1O75626 825 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 MRE11P49959 708 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 TFAP4Q01664 338 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 FERMT3Q86UX7 667 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 PHKBQ93100 1093 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 SPATA32Q96LK8 384 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 PHF20Q9BVI0 1012 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 FAM237AA0A1B0GTK4 181 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 RXRAP19793 462 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 MXD3Q9BW11 206 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 MAD2L2Q9UI95 211 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 A0A1W2PQ27 194 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 A0A1W2PQ64 194 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 A0A1W2PQD8 194 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 FIBPO43427 364 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 NMT2O60551 498 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 GUCY1A2P33402 732 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 FAM47AQ5JRC9 791 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 LINC00301Q8NCQ3 95 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 ZBED3Q96IU2 234 aaPredicted RBP11.85□□□□□ -0.51
CDCA7-206ENST00000467411 SH3GLB2Q9NR46 395 aa11.85□□□□□ -0.51
CDCA7-206ENST00000467411 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
CDCA7-206ENST00000467411 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
CDCA7-206ENST00000467411 TSPY2A6NKD2 308 aa11.84□□□□□ -0.51
CDCA7-206ENST00000467411 SNHG28P0DPA3 235 aa11.84□□□□□ -0.51
CDCA7-206ENST00000467411 NCLP19338 710 aaKnown RBP11.84□□□□□ -0.51
CDCA7-206ENST00000467411 TNFRSF25Q93038 417 aa11.84□□□□□ -0.51
CDCA7-206ENST00000467411 USP28Q96RU2 1077 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms