RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 H3BS24 57 aa7.5□□□□□ -1.21
SMC4-207ENST00000467263 EAPPQ56P03 285 aaPredicted RBP7.5□□□□□ -1.21
SMC4-207ENST00000467263 FBF1Q8TES7 1133 aa7.5□□□□□ -1.21
SMC4-207ENST00000467263 MIPEPQ99797 713 aa7.5□□□□□ -1.21
SMC4-207ENST00000467263 SAMM50Q9Y512 469 aa7.5□□□□□ -1.21
SMC4-207ENST00000467263 KRT1P04264 644 aa7.49□□□□□ -1.21
SMC4-207ENST00000467263 LRRC14Q15048 493 aa7.49□□□□□ -1.21
SMC4-207ENST00000467263 TMCO4Q5TGY1 634 aa7.49□□□□□ -1.21
SMC4-207ENST00000467263 C1QL4Q86Z23 238 aa7.49□□□□□ -1.21
SMC4-207ENST00000467263 ZNF507Q8TCN5 953 aa7.49□□□□□ -1.21
SMC4-207ENST00000467263 RNF19AQ9NV58 838 aa7.49□□□□□ -1.21
SMC4-207ENST00000467263 TPX2Q9ULW0 747 aaKnown RBP7.49□□□□□ -1.21
SMC4-207ENST00000467263 ST14Q9Y5Y6 855 aa7.49□□□□□ -1.21
SMC4-207ENST00000467263 USP17L7P0C7H9 530 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 ZNF865P0CJ78 1059 aaPredicted RBP7.48□□□□□ -1.21
SMC4-207ENST00000467263 CFPP27918 469 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 ANKRD24Q8TF21 1146 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 XAGE3Q8WTP9 111 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 KIRREL1Q96J84 757 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 SRCIN1Q9C0H9 1055 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 WNT10AQ9GZT5 417 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 LMCD1Q9NZU5 365 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 CYP8B1Q9UNU6 501 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 CAPN6Q9Y6Q1 641 aa7.48□□□□□ -1.21
SMC4-207ENST00000467263 FAM155AB1AL88 458 aaPredicted RBP7.47□□□□□ -1.21
SMC4-207ENST00000467263 GLI1P08151 1106 aa7.47□□□□□ -1.21
SMC4-207ENST00000467263 AFMP43652 599 aa7.47□□□□□ -1.21
SMC4-207ENST00000467263 WIPI1Q5MNZ9 446 aaPredicted RBP7.47□□□□□ -1.21
SMC4-207ENST00000467263 LCNL1Q6ZST4 164 aa7.47□□□□□ -1.21
SMC4-207ENST00000467263 MFSD4AQ8N468 514 aa7.47□□□□□ -1.21
SMC4-207ENST00000467263 KCT2Q8NC54 265 aa7.47□□□□□ -1.21
SMC4-207ENST00000467263 KRTAP4-2Q9BYR5 136 aa7.47□□□□□ -1.21
SMC4-207ENST00000467263 C12orf49Q9H741 205 aa7.47□□□□□ -1.21
SMC4-207ENST00000467263 WASH4PA8MWX3 477 aa7.46□□□□□ -1.22
SMC4-207ENST00000467263 PRPF40AO75400 957 aaKnown RBP7.46□□□□□ -1.22
SMC4-207ENST00000467263 CBX7O95931 251 aa7.46□□□□□ -1.22
SMC4-207ENST00000467263 SFRP5Q5T4F7 317 aa7.46□□□□□ -1.22
SMC4-207ENST00000467263 PRAMEF13Q5VWM6 474 aa7.46□□□□□ -1.22
SMC4-207ENST00000467263 DUSP9Q99956 384 aaKnown RBP7.46□□□□□ -1.22
SMC4-207ENST00000467263 FAM53CQ9NYF3 392 aa7.46□□□□□ -1.22
SMC4-207ENST00000467263 SPG7Q9UQ90 795 aa7.46□□□□□ -1.22
SMC4-207ENST00000467263 PCDHB5Q9Y5E4 795 aa7.46□□□□□ -1.22
SMC4-207ENST00000467263 RAP1GAPP47736 663 aa7.45□□□□□ -1.22
SMC4-207ENST00000467263 ETF1P62495 437 aaKnown RBP7.45□□□□□ -1.22
SMC4-207ENST00000467263 TAGLNQ01995 201 aaKnown RBP7.45□□□□□ -1.22
SMC4-207ENST00000467263 LETMD1Q6P1Q0 360 aa7.45□□□□□ -1.22
SMC4-207ENST00000467263 C22orf34Q6ZV56 151 aa7.45□□□□□ -1.22
SMC4-207ENST00000467263 SYDE1Q6ZW31 735 aaPredicted RBP7.45□□□□□ -1.22
SMC4-207ENST00000467263 HDXQ7Z353 690 aa7.45□□□□□ -1.22
SMC4-207ENST00000467263 C1QTNF9P0C862 333 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 GRK4P32298 578 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 GDNFP39905 211 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 CAP2P40123 477 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 ERVFC1P60507 584 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 SEPT6Q14141 434 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 TMEM67Q5HYA8 995 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 MPZL3Q6UWV2 235 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 FBXO33Q7Z6M2 555 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 CDH24Q86UP0 819 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 BHLHE22Q8NFJ8 381 aaPredicted RBP7.44□□□□□ -1.22
SMC4-207ENST00000467263 UBE2FQ969M7 185 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 DIRC2Q96SL1 478 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 DPH2Q9BQC3 489 aaPredicted RBP7.44□□□□□ -1.22
SMC4-207ENST00000467263 FAM8A1Q9UBU6 413 aa7.44□□□□□ -1.22
SMC4-207ENST00000467263 GIPC1O14908 333 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 TSPAN15O95858 294 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 ERCC3P19447 782 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 GNA15P30679 374 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 MFAP1P55081 439 aaKnown RBP7.43□□□□□ -1.22
SMC4-207ENST00000467263 TNK2Q07912 1038 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 RALGPS1Q5JS13 557 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 SCARA3Q6AZY7 606 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 TTBK2Q6IQ55 1244 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 ZSWIM5Q9P217 1185 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 PARP2Q9UGN5 583 aa7.43□□□□□ -1.22
SMC4-207ENST00000467263 TTF2Q9UNY4 1162 aaKnown RBP7.43□□□□□ -1.22
SMC4-207ENST00000467263 DNAJC25-GNG10A0A024R161 153 aa7.42□□□□□ -1.22
SMC4-207ENST00000467263 GFRA2O00451 464 aa7.42□□□□□ -1.22
SMC4-207ENST00000467263 CST3P01034 146 aaPredicted RBP7.42□□□□□ -1.22
SMC4-207ENST00000467263 HID1Q8IV36 788 aa7.42□□□□□ -1.22
SMC4-207ENST00000467263 MFSD2AQ8NA29 543 aa7.42□□□□□ -1.22
SMC4-207ENST00000467263 FAM161BQ96MY7 647 aa7.42□□□□□ -1.22
SMC4-207ENST00000467263 SLAMF8Q9P0V8 285 aa7.42□□□□□ -1.22
SMC4-207ENST00000467263 ESR1P03372 595 aa7.41□□□□□ -1.22
SMC4-207ENST00000467263 SV2BQ7L1I2 683 aa7.41□□□□□ -1.22
SMC4-207ENST00000467263 LRRC56Q8IYG6 542 aaPredicted RBP7.41□□□□□ -1.22
SMC4-207ENST00000467263 ALPK1Q96QP1 1244 aa7.41□□□□□ -1.22
SMC4-207ENST00000467263 NSUN3Q9H649 340 aaKnown RBP7.41□□□□□ -1.22
SMC4-207ENST00000467263 TJP2Q9UDY2 1190 aa7.41□□□□□ -1.22
SMC4-207ENST00000467263 SNCAIPQ9Y6H5 919 aa7.41□□□□□ -1.22
SMC4-207ENST00000467263 EIF4BP23588 611 aaKnown RBP7.4□□□□□ -1.22
SMC4-207ENST00000467263 XPCQ01831 940 aaPredicted RBP7.4□□□□□ -1.22
SMC4-207ENST00000467263 FRMD6Q96NE9 622 aa7.4□□□□□ -1.22
SMC4-207ENST00000467263 BCL2L13Q9BXK5 485 aa7.4□□□□□ -1.22
SMC4-207ENST00000467263 PSMD2Q13200 908 aa7.39□□□□□ -1.23
SMC4-207ENST00000467263 MAP3K11Q16584 847 aa7.39□□□□□ -1.23
SMC4-207ENST00000467263 THAP5Q7Z6K1 395 aa7.39□□□□□ -1.23
SMC4-207ENST00000467263 TTC6Q86TZ1 520 aa7.39□□□□□ -1.23
SMC4-207ENST00000467263 GIPC2Q8TF65 315 aa7.39□□□□□ -1.23
SMC4-207ENST00000467263 Q96M66 194 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms