RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 DDNO94850 711 aaPredicted RBP15.27■□□□□ 0.04
COL4A1-202ENST00000467182 CTDNEP1O95476 244 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 HLA-DOAP06340 250 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 HSP90AA1P07900 732 aaKnown RBP15.27■□□□□ 0.04
COL4A1-202ENST00000467182 NOVP48745 357 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 KIF4BQ2VIQ3 1234 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 TBC1D10BQ4KMP7 808 aaPredicted RBP15.27■□□□□ 0.04
COL4A1-202ENST00000467182 APOA5Q6Q788 366 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 FAM83AQ86UY5 434 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 NEDD1Q8NHV4 660 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 ANKS1AQ92625 1134 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL4A1-202ENST00000467182 CWC22Q9HCG8 908 aaKnown RBP15.27■□□□□ 0.04
COL4A1-202ENST00000467182 TMOD2Q9NZR1 351 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.04
COL4A1-202ENST00000467182 IGKV6D-41A0A0C4DH26 115 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 TSPY2A6NKD2 308 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 GOLGA8BA8MQT2 603 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 GRIN3BO60391 1043 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 DTNBO60941 627 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 EPS15P42566 896 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 SART3Q15020 963 aaKnown RBP15.26■□□□□ 0.03
COL4A1-202ENST00000467182 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
COL4A1-202ENST00000467182 IQCA1Q86XH1 822 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 FOXP4Q8IVH2 680 aaPredicted RBP15.26■□□□□ 0.03
COL4A1-202ENST00000467182 ZNF444Q8N0Y2 327 aaPredicted RBP15.26■□□□□ 0.03
COL4A1-202ENST00000467182 TRPM4Q8TD43 1214 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 UBAC1Q9BSL1 405 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 VEZTQ9HBM0 779 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 ZNF287Q9HBT7 754 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 CIZ1Q9ULV3 898 aaPredicted RBP15.26■□□□□ 0.03
COL4A1-202ENST00000467182 UTRNP46939 3433 aa15.26■□□□□ 0.03
COL4A1-202ENST00000467182 MYO1BO43795 1136 aa15.25■□□□□ 0.03
COL4A1-202ENST00000467182 AKR1B1P15121 316 aa15.25■□□□□ 0.03
COL4A1-202ENST00000467182 HIRAP54198 1017 aaPredicted RBP15.25■□□□□ 0.03
COL4A1-202ENST00000467182 CCT2P78371 535 aaKnown RBP15.25■□□□□ 0.03
COL4A1-202ENST00000467182 TATDN1Q6P1N9 297 aa15.25■□□□□ 0.03
COL4A1-202ENST00000467182 RAB11FIP4Q86YS3 637 aa15.25■□□□□ 0.03
COL4A1-202ENST00000467182 CDAN1Q8IWY9 1227 aa15.25■□□□□ 0.03
COL4A1-202ENST00000467182 TMTC2Q8N394 836 aa15.25■□□□□ 0.03
COL4A1-202ENST00000467182 NSUN7Q8NE18 718 aaKnown RBP15.25■□□□□ 0.03
COL4A1-202ENST00000467182 SMARCC2Q8TAQ2 1214 aa15.25■□□□□ 0.03
COL4A1-202ENST00000467182 NCOA5Q9HCD5 579 aaKnown RBP15.25■□□□□ 0.03
COL4A1-202ENST00000467182 FAM217BQ9NTX9 383 aaPredicted RBP15.25■□□□□ 0.03
COL4A1-202ENST00000467182 CHMP5Q9NZZ3 219 aa15.25■□□□□ 0.03
COL4A1-202ENST00000467182 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.25■□□□□ 0.03
COL4A1-202ENST00000467182 ZC3H4Q9UPT8 1303 aaKnown RBP15.24■□□□□ 0.03
COL4A1-202ENST00000467182 ERICH2A1L162 156 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 CCDC69A6NI79 296 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 FAM196BA6NMK8 535 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 H7C1D1 291 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 JAK2O60674 1132 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 RCAN1P53805 252 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 NFXL1Q6ZNB6 911 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 DGKHQ86XP1 1220 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 ZSCAN29Q8IWY8 852 aaPredicted RBP15.24■□□□□ 0.03
COL4A1-202ENST00000467182 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 TEPSINQ96N21 525 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 LLPHQ9BRT6 129 aaKnown RBP15.24■□□□□ 0.03
COL4A1-202ENST00000467182 MYL10Q9BUA6 226 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 TMEM39BQ9GZU3 492 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 HACL1Q9UJ83 578 aa15.24■□□□□ 0.03
COL4A1-202ENST00000467182 ZBTB43O43298 467 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 RXRAP19793 462 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 GJB2P29033 226 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 CDC27P30260 824 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 MAP3K10Q02779 954 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 TROAPQ12815 778 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 PKP1Q13835 747 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
COL4A1-202ENST00000467182 CCDC178Q5BJE1 867 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 IFIT1BQ5T764 474 aaKnown RBP15.23■□□□□ 0.03
COL4A1-202ENST00000467182 L3MBTL3Q96JM7 780 aaPredicted RBP15.23■□□□□ 0.03
COL4A1-202ENST00000467182 CSRNP1Q96S65 589 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 SMC3Q9UQE7 1217 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 ZDHHC9Q9Y397 364 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
COL4A1-202ENST00000467182 METAP2P50579 478 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL4A1-202ENST00000467182 JAG1P78504 1218 aa15.22■□□□□ 0.03
COL4A1-202ENST00000467182 RASA3Q14644 834 aa15.22■□□□□ 0.03
COL4A1-202ENST00000467182 NTRK3Q16288 839 aa15.22■□□□□ 0.03
COL4A1-202ENST00000467182 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
COL4A1-202ENST00000467182 MICU3Q86XE3 530 aa15.22■□□□□ 0.03
COL4A1-202ENST00000467182 HERC5Q9UII4 1024 aaKnown RBP15.22■□□□□ 0.03
COL4A1-202ENST00000467182 NAP1L2Q9ULW6 460 aaPredicted RBP15.22■□□□□ 0.03
COL4A1-202ENST00000467182 SCAF8Q9UPN6 1271 aaKnown RBP15.22■□□□□ 0.03
COL4A1-202ENST00000467182 WDR90Q96KV7 1748 aa15.22■□□□□ 0.03
COL4A1-202ENST00000467182 PTPDC1A2A3K4 754 aa15.21■□□□□ 0.03
COL4A1-202ENST00000467182 GOLGA8AA7E2F4 631 aa15.21■□□□□ 0.03
COL4A1-202ENST00000467182 TBC1D12O60347 775 aa15.21■□□□□ 0.03
COL4A1-202ENST00000467182 DDAH1O94760 285 aa15.21■□□□□ 0.03
COL4A1-202ENST00000467182 FDPSP14324 419 aaKnown RBP15.21■□□□□ 0.03
COL4A1-202ENST00000467182 GUCY1A2P33402 732 aa15.21■□□□□ 0.03
COL4A1-202ENST00000467182 ADD1P35611 737 aaKnown RBP15.21■□□□□ 0.03
COL4A1-202ENST00000467182 TNNI2P48788 182 aa15.21■□□□□ 0.03
COL4A1-202ENST00000467182 RAB3GAP1Q15042 981 aa15.21■□□□□ 0.03
COL4A1-202ENST00000467182 CRACR2BQ8N4Y2 399 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms