RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 RING1Q06587 406 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 TMEM201Q5SNT2 666 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 MRM1Q6IN84 353 aaKnown RBP6□□□□□ -1.45
VPS13A-209ENST00000467124 Q6ZS46 218 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 KIAA1211Q6ZU35 1233 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 SPATC1Q76KD6 591 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 UBE3DQ7Z6J8 389 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 FAM178BQ8IXR5 827 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 TAB3Q8N5C8 712 aaPredicted RBP6□□□□□ -1.45
VPS13A-209ENST00000467124 KCT2Q8NC54 265 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 LENG1Q96BZ8 264 aaPredicted RBP6□□□□□ -1.45
VPS13A-209ENST00000467124 ATG4CQ96DT6 458 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 CEP41Q9BYV8 373 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 FANCLQ9NW38 375 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 CRIM1Q9NZV1 1036 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 PPP1R9AQ9ULJ8 1098 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 AP4E1Q9UPM8 1137 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 LEMD3Q9Y2U8 911 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 MSRB2Q9Y3D2 182 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 LTBP3Q9NS15 1303 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 FAM181BA6NEQ2 426 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 RNF225M0QZC1 329 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-209ENST00000467124 TMPRSS2O15393 492 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 TIAF1O95411 115 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 HMGB1P09429 215 aaKnown RBP5.99□□□□□ -1.45
VPS13A-209ENST00000467124 GUCY2CP25092 1073 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 UVSSAQ2YD98 709 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 MTERF2Q49AM1 385 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 FDX2Q6P4F2 183 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 UNC5AQ6ZN44 842 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 RNF214Q8ND24 703 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 SLC9A7Q96T83 725 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 TM9SF2Q99805 663 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 GSX1Q9H4S2 264 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-209ENST00000467124 GMIPQ9P107 970 aa5.99□□□□□ -1.45
VPS13A-209ENST00000467124 C9orf172C9J069 976 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 F8W735 103 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-209ENST00000467124 DRD2P14416 443 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 NME1P15531 152 aaKnown RBP5.98□□□□□ -1.45
VPS13A-209ENST00000467124 CASP7P55210 303 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 C21orf62-AS1Q17RA5 79 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 ZBTB37Q5TC79 503 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
VPS13A-209ENST00000467124 NLRC3Q7RTR2 1065 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 FAM13CQ8NE31 585 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 XAGE3Q8WTP9 111 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 ACSF2Q96CM8 615 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-209ENST00000467124 WNT10AQ9GZT5 417 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 CCDC113Q9H0I3 377 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 FBRSQ9HAH7 460 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 SLC12A7Q9Y666 1083 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 KDM2BQ8NHM5 1336 aa5.98□□□□□ -1.45
VPS13A-209ENST00000467124 APBA3O96018 575 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 HCLS1P14317 486 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-209ENST00000467124 RAG1P15918 1043 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 NCLP19338 710 aaKnown RBP5.97□□□□□ -1.45
VPS13A-209ENST00000467124 CDK11BP21127 795 aaKnown RBP5.97□□□□□ -1.45
VPS13A-209ENST00000467124 CAP2P40123 477 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 SOX4Q06945 474 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-209ENST00000467124 RASGRF1Q13972 1273 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 KIAA1211LQ6NV74 962 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 VHLLQ6RSH7 139 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 AGGF1Q8N302 714 aaeCLIP5.97□□□□□ -1.45
VPS13A-209ENST00000467124 GPATCH3Q96I76 525 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 KIF2CQ99661 725 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 AKTIPQ9H8T0 292 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 TJP2Q9UDY2 1190 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 ADAMTS8Q9UP79 889 aa5.97□□□□□ -1.45
VPS13A-209ENST00000467124 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-209ENST00000467124 RNGTTO60942 597 aaKnown RBP5.96□□□□□ -1.46
VPS13A-209ENST00000467124 CDC45O75419 566 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 TP53P04637 393 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-209ENST00000467124 HSD3B2P26439 372 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 SSRP1Q08945 709 aaKnown RBP5.96□□□□□ -1.46
VPS13A-209ENST00000467124 SQSTM1Q13501 440 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 TTLL4Q14679 1199 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 NKG7Q16617 165 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 DYMQ7RTS9 669 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 LRP10Q7Z4F1 713 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 MRPL41Q8IXM3 137 aaKnown RBP5.96□□□□□ -1.46
VPS13A-209ENST00000467124 PHACTR4Q8IZ21 702 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 ZNF507Q8TCN5 953 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 ZNF512BQ96KM6 892 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-209ENST00000467124 FANCD2OSQ96PS1 177 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 YIPF2Q9BWQ6 316 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 CNNM2Q9H8M5 875 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 PIDD1Q9HB75 910 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 LGR6Q9HBX8 967 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 DISC1Q9NRI5 854 aa5.96□□□□□ -1.46
VPS13A-209ENST00000467124 CLSTN1O94985 981 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 NEFMP07197 916 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 CCNFP41002 786 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 YARSP54577 528 aaKnown RBP5.95□□□□□ -1.46
VPS13A-209ENST00000467124 GNPTABQ3T906 1256 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 CDCP2Q5VXM1 449 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 INTS3Q68E01 1043 aaKnown RBP5.95□□□□□ -1.46
VPS13A-209ENST00000467124 SLC6A19Q695T7 634 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 HID1Q8IV36 788 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 SLFN12Q8IYM2 578 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 BAHD1Q8TBE0 780 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms