RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 TACC3Q9Y6A5 838 aa8.14□□□□□ -1.11
PRPF40A-205ENST00000467114 GFRA2O00451 464 aa8.13□□□□□ -1.11
PRPF40A-205ENST00000467114 CST3P01034 146 aaPredicted RBP8.13□□□□□ -1.11
PRPF40A-205ENST00000467114 FGD1P98174 961 aa8.13□□□□□ -1.11
PRPF40A-205ENST00000467114 CCDC85BQ15834 202 aaPredicted RBP8.13□□□□□ -1.11
PRPF40A-205ENST00000467114 RIN3Q8TB24 985 aa8.13□□□□□ -1.11
PRPF40A-205ENST00000467114 CAPN6Q9Y6Q1 641 aa8.13□□□□□ -1.11
PRPF40A-205ENST00000467114 ZNF503-AS2A6NEH8 195 aa8.12□□□□□ -1.11
PRPF40A-205ENST00000467114 FAM155AB1AL88 458 aaPredicted RBP8.12□□□□□ -1.11
PRPF40A-205ENST00000467114 ZNF746Q6NUN9 644 aaPredicted RBP8.12□□□□□ -1.11
PRPF40A-205ENST00000467114 LETMD1Q6P1Q0 360 aa8.12□□□□□ -1.11
PRPF40A-205ENST00000467114 AGMOQ6ZNB7 445 aa8.12□□□□□ -1.11
PRPF40A-205ENST00000467114 FAM53CQ9NYF3 392 aa8.12□□□□□ -1.11
PRPF40A-205ENST00000467114 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.12□□□□□ -1.11
PRPF40A-205ENST00000467114 PCDHB5Q9Y5E4 795 aa8.12□□□□□ -1.11
PRPF40A-205ENST00000467114 ST14Q9Y5Y6 855 aa8.12□□□□□ -1.11
PRPF40A-205ENST00000467114 DBX1A6NMT0 343 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 GRK4P32298 578 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 MESP2Q0VG99 397 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 SEPT6Q14141 434 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 ZNF124Q15973 351 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 KCNMB1Q16558 191 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 PRAMEF13Q5VWM6 474 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 NPAS4Q8IUM7 802 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 COX4I2Q96KJ9 171 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 CARS2Q9HA77 564 aaKnown RBP8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 ATP13A1Q9HD20 1204 aa8.11□□□□□ -1.11
PRPF40A-205ENST00000467114 AFMP43652 599 aa8.1□□□□□ -1.11
PRPF40A-205ENST00000467114 CDKAL1Q5VV42 579 aa8.1□□□□□ -1.11
PRPF40A-205ENST00000467114 THAP5Q7Z6K1 395 aa8.1□□□□□ -1.11
PRPF40A-205ENST00000467114 DUSP9Q99956 384 aaKnown RBP8.1□□□□□ -1.11
PRPF40A-205ENST00000467114 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
PRPF40A-205ENST00000467114 LRRC10BA6NIK2 292 aa8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 LIG3P49916 1009 aa8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 LCE1DQ5T752 114 aa8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 KSR1Q8IVT5 923 aa8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 MRPL41Q8IXM3 137 aaKnown RBP8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 BHLHE22Q8NFJ8 381 aaPredicted RBP8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 FAM84AQ96KN4 292 aa8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 RNF19AQ9NV58 838 aa8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 C19orf73Q9NVV2 129 aa8.09□□□□□ -1.11
PRPF40A-205ENST00000467114 H3BS24 57 aa8.08□□□□□ -1.12
PRPF40A-205ENST00000467114 LMNB1P20700 586 aa8.08□□□□□ -1.12
PRPF40A-205ENST00000467114 KIR3DL1P43629 444 aa8.08□□□□□ -1.12
PRPF40A-205ENST00000467114 PKN1Q16512 942 aa8.08□□□□□ -1.12
PRPF40A-205ENST00000467114 FYB2Q5VWT5 728 aa8.08□□□□□ -1.12
PRPF40A-205ENST00000467114 DNAJC14Q6Y2X3 702 aaPredicted RBP8.08□□□□□ -1.12
PRPF40A-205ENST00000467114 SLC38A3Q99624 504 aa8.08□□□□□ -1.12
PRPF40A-205ENST00000467114 ANKRD33BA6NCL7 494 aa8.07□□□□□ -1.12
PRPF40A-205ENST00000467114 CBX7O95931 251 aa8.07□□□□□ -1.12
PRPF40A-205ENST00000467114 CYP7A1P22680 504 aa8.07□□□□□ -1.12
PRPF40A-205ENST00000467114 GDNFP39905 211 aa8.07□□□□□ -1.12
PRPF40A-205ENST00000467114 EAPPQ56P03 285 aaPredicted RBP8.07□□□□□ -1.12
PRPF40A-205ENST00000467114 MIR1-1HGQ9H1L0 117 aa8.07□□□□□ -1.12
PRPF40A-205ENST00000467114 TJP2Q9UDY2 1190 aa8.07□□□□□ -1.12
PRPF40A-205ENST00000467114 GLI1P08151 1106 aa8.06□□□□□ -1.12
PRPF40A-205ENST00000467114 TFE3P19532 575 aaPredicted RBP8.06□□□□□ -1.12
PRPF40A-205ENST00000467114 MLANAQ16655 118 aa8.06□□□□□ -1.12
PRPF40A-205ENST00000467114 SLC6A19Q695T7 634 aa8.06□□□□□ -1.12
PRPF40A-205ENST00000467114 CDH24Q86UP0 819 aa8.06□□□□□ -1.12
PRPF40A-205ENST00000467114 XAGE3Q8WTP9 111 aa8.06□□□□□ -1.12
PRPF40A-205ENST00000467114 KIRREL1Q96J84 757 aa8.06□□□□□ -1.12
PRPF40A-205ENST00000467114 PGRP06401 933 aa8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 RLBP1P12271 317 aa8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 RPL6Q02878 288 aaKnown RBP8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 TNK2Q07912 1038 aa8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 MAP3K11Q16584 847 aa8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 TSNAXIP1Q2TAA8 658 aa8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 MEI1Q5TIA1 1274 aa8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 PIWIL2Q8TC59 973 aaKnown RBP8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 UBE2FQ969M7 185 aa8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 LIN37Q96GY3 246 aaPredicted RBP8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 CCDC120Q96HB5 630 aa8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 TMEM87BQ96K49 555 aa8.05□□□□□ -1.12
PRPF40A-205ENST00000467114 ZBTB7CA1YPR0 619 aa8.04□□□□□ -1.12
PRPF40A-205ENST00000467114 MCATQ8IVS2 390 aaKnown RBP8.04□□□□□ -1.12
PRPF40A-205ENST00000467114 NOC4LQ9BVI4 516 aaKnown RBP8.04□□□□□ -1.12
PRPF40A-205ENST00000467114 ADAM30Q9UKF2 790 aa8.04□□□□□ -1.12
PRPF40A-205ENST00000467114 RBAK-RBAKDNI3L0D1 243 aa8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 ETV3P41162 512 aa8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 ST13P50502 369 aaKnown RBP8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 DAB2P98082 770 aa8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 PDE4BQ07343 736 aa8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 TMEM67Q5HYA8 995 aa8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 DNAJB8Q8NHS0 232 aa8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 ALPK1Q96QP1 1244 aa8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 DPH2Q9BQC3 489 aaPredicted RBP8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 ZSWIM5Q9P217 1185 aa8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 PARP2Q9UGN5 583 aa8.03□□□□□ -1.12
PRPF40A-205ENST00000467114 TAF1CQ15572 869 aaPredicted RBP8.02□□□□□ -1.13
PRPF40A-205ENST00000467114 TMPRSS7Q7RTY8 843 aa8.02□□□□□ -1.13
PRPF40A-205ENST00000467114 CCDC84Q86UT8 332 aaPredicted RBP8.02□□□□□ -1.13
PRPF40A-205ENST00000467114 CILP2Q8IUL8 1156 aa8.02□□□□□ -1.13
PRPF40A-205ENST00000467114 ACSF2Q96CM8 615 aaPredicted RBP8.02□□□□□ -1.13
PRPF40A-205ENST00000467114 ESR1P03372 595 aa8.01□□□□□ -1.13
PRPF40A-205ENST00000467114 PHC3Q8NDX5 983 aa8.01□□□□□ -1.13
PRPF40A-205ENST00000467114 Q96M66 194 aa8.01□□□□□ -1.13
PRPF40A-205ENST00000467114 CEP131Q9UPN4 1083 aa8.01□□□□□ -1.13
PRPF40A-205ENST00000467114 TLR6Q9Y2C9 796 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms