RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 PRR33A8MZF0 331 aa7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 CST3P01034 146 aaPredicted RBP7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 CYP7A1P22680 504 aa7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 CDK8P49336 464 aa7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 PKN1Q16512 942 aa7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 EAPPQ56P03 285 aaPredicted RBP7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 AGMOQ6ZNB7 445 aa7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 NPAS4Q8IUM7 802 aa7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 DUSP9Q99956 384 aaKnown RBP7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 SEMA3GQ9NS98 782 aa7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 CTNND2Q9UQB3 1225 aa7.38□□□□□ -1.23
CHMP2B-202ENST00000466696 ANKRD33BA6NCL7 494 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 GFRA2O00451 464 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 RLBP1P12271 317 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 AFMP43652 599 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 LIG3P49916 1009 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 SEPT6Q14141 434 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 KCNMB1Q16558 191 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 CDKAL1Q5VV42 579 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 PRAMEF13Q5VWM6 474 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 KSR1Q8IVT5 923 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 MIR1-1HGQ9H1L0 117 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 CARS2Q9HA77 564 aaKnown RBP7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 ATP13A1Q9HD20 1204 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 PCDHB5Q9Y5E4 795 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 CAPN6Q9Y6Q1 641 aa7.37□□□□□ -1.23
CHMP2B-202ENST00000466696 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
CHMP2B-202ENST00000466696 DIEXFQ68CQ4 756 aaKnown RBP7.36□□□□□ -1.23
CHMP2B-202ENST00000466696 THAP5Q7Z6K1 395 aa7.36□□□□□ -1.23
CHMP2B-202ENST00000466696 RIN3Q8TB24 985 aa7.36□□□□□ -1.23
CHMP2B-202ENST00000466696 SLC38A3Q99624 504 aa7.36□□□□□ -1.23
CHMP2B-202ENST00000466696 ST14Q9Y5Y6 855 aa7.36□□□□□ -1.23
CHMP2B-202ENST00000466696 LRRC10BA6NIK2 292 aa7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 H3BS24 57 aa7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 KIR3DL1P43629 444 aa7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 PDE4BQ07343 736 aa7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 MAP3K11Q16584 847 aa7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 TSNAXIP1Q2TAA8 658 aa7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 SND1Q7KZF4 910 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 MRPL41Q8IXM3 137 aaKnown RBP7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 XAGE3Q8WTP9 111 aa7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 CCDC120Q96HB5 630 aa7.35□□□□□ -1.23
CHMP2B-202ENST00000466696 CBX7O95931 251 aa7.34□□□□□ -1.23
CHMP2B-202ENST00000466696 PGRP06401 933 aa7.34□□□□□ -1.23
CHMP2B-202ENST00000466696 ZNF124Q15973 351 aa7.34□□□□□ -1.23
CHMP2B-202ENST00000466696 SLC6A19Q695T7 634 aa7.34□□□□□ -1.23
CHMP2B-202ENST00000466696 FAM84AQ96KN4 292 aa7.34□□□□□ -1.23
CHMP2B-202ENST00000466696 RNF19AQ9NV58 838 aa7.34□□□□□ -1.23
CHMP2B-202ENST00000466696 ZNF503-AS2A6NEH8 195 aa7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 DBX1A6NMT0 343 aa7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 GDNFP39905 211 aa7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 ETV3P41162 512 aa7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 MEI1Q5TIA1 1274 aa7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 CDH24Q86UP0 819 aa7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 BHLHE22Q8NFJ8 381 aaPredicted RBP7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 TMEM87BQ96K49 555 aa7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 NOC4LQ9BVI4 516 aaKnown RBP7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 TJP2Q9UDY2 1190 aa7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 PARP2Q9UGN5 583 aa7.33□□□□□ -1.24
CHMP2B-202ENST00000466696 GLI1P08151 1106 aa7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 TFE3P19532 575 aaPredicted RBP7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 ST13P50502 369 aaKnown RBP7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 RPL6Q02878 288 aaKnown RBP7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 MESP2Q0VG99 397 aa7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 PSMD2Q13200 908 aa7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 TAF1CQ15572 869 aaPredicted RBP7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 MLANAQ16655 118 aa7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 PIWIL2Q8TC59 973 aaKnown RBP7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 UBE2FQ969M7 185 aa7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 KIRREL1Q96J84 757 aa7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 ADAM30Q9UKF2 790 aa7.32□□□□□ -1.24
CHMP2B-202ENST00000466696 DAB2P98082 770 aa7.31□□□□□ -1.24
CHMP2B-202ENST00000466696 TNK2Q07912 1038 aa7.31□□□□□ -1.24
CHMP2B-202ENST00000466696 FYB2Q5VWT5 728 aa7.31□□□□□ -1.24
CHMP2B-202ENST00000466696 MCATQ8IVS2 390 aaKnown RBP7.31□□□□□ -1.24
CHMP2B-202ENST00000466696 ALPK1Q96QP1 1244 aa7.31□□□□□ -1.24
CHMP2B-202ENST00000466696 DPH2Q9BQC3 489 aaPredicted RBP7.31□□□□□ -1.24
CHMP2B-202ENST00000466696 ZSWIM5Q9P217 1185 aa7.31□□□□□ -1.24
CHMP2B-202ENST00000466696 XPCQ01831 940 aaPredicted RBP7.3□□□□□ -1.24
CHMP2B-202ENST00000466696 TMEM67Q5HYA8 995 aa7.3□□□□□ -1.24
CHMP2B-202ENST00000466696 TMPRSS7Q7RTY8 843 aa7.3□□□□□ -1.24
CHMP2B-202ENST00000466696 CCDC84Q86UT8 332 aaPredicted RBP7.3□□□□□ -1.24
CHMP2B-202ENST00000466696 JARID2Q92833 1246 aaPredicted RBP7.3□□□□□ -1.24
CHMP2B-202ENST00000466696 LIN37Q96GY3 246 aaPredicted RBP7.3□□□□□ -1.24
CHMP2B-202ENST00000466696 C19orf73Q9NVV2 129 aa7.3□□□□□ -1.24
CHMP2B-202ENST00000466696 TLR6Q9Y2C9 796 aa7.3□□□□□ -1.24
CHMP2B-202ENST00000466696 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.29□□□□□ -1.24
CHMP2B-202ENST00000466696 MPZL3Q6UWV2 235 aa7.29□□□□□ -1.24
CHMP2B-202ENST00000466696 PHC3Q8NDX5 983 aa7.29□□□□□ -1.24
CHMP2B-202ENST00000466696 ACSF2Q96CM8 615 aaPredicted RBP7.29□□□□□ -1.24
CHMP2B-202ENST00000466696 TMC4Q7Z404 712 aa7.28□□□□□ -1.24
CHMP2B-202ENST00000466696 AEBP1Q8IUX7 1158 aa7.28□□□□□ -1.24
CHMP2B-202ENST00000466696 CEP131Q9UPN4 1083 aa7.28□□□□□ -1.24
CHMP2B-202ENST00000466696 USP31Q70CQ4 1352 aa7.28□□□□□ -1.24
CHMP2B-202ENST00000466696 BPNT1O95861 308 aa7.27□□□□□ -1.25
CHMP2B-202ENST00000466696 RAC2P15153 192 aa7.27□□□□□ -1.25
CHMP2B-202ENST00000466696 DNAJB8Q8NHS0 232 aa7.27□□□□□ -1.25
CHMP2B-202ENST00000466696 PPP1R16BQ96T49 567 aa7.27□□□□□ -1.25
CHMP2B-202ENST00000466696 TRIT1Q9H3H1 467 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms