RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 SHTN1A0MZ66 631 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 VPS37CA5D8V6 355 aaPredicted RBP17.81■□□□□ 0.44
SNED1-208ENST00000466618 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 M0R2C6 588 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 H2AFXP16104 143 aaPredicted RBP17.81■□□□□ 0.44
SNED1-208ENST00000466618 MCMDC2Q4G0Z9 681 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 DPY19L2Q6NUT2 758 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 OGFOD1Q8N543 542 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 TEKT1Q969V4 418 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 DACT1Q9NYF0 836 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 SLU7O95391 586 aaKnown RBP17.8■□□□□ 0.44
SNED1-208ENST00000466618 PPP4CP60510 307 aa17.8■□□□□ 0.44
SNED1-208ENST00000466618 APOBEC3HQ6NTF7 200 aaKnown RBP17.8■□□□□ 0.44
SNED1-208ENST00000466618 MTMR14Q8NCE2 650 aa17.8■□□□□ 0.44
SNED1-208ENST00000466618 L3MBTL3Q96JM7 780 aaPredicted RBP17.8■□□□□ 0.44
SNED1-208ENST00000466618 TRERF1Q96PN7 1200 aa17.8■□□□□ 0.44
SNED1-208ENST00000466618 TSPYL1Q9H0U9 437 aa17.8■□□□□ 0.44
SNED1-208ENST00000466618 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
SNED1-208ENST00000466618 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.8■□□□□ 0.44
SNED1-208ENST00000466618 CNOT7Q9UIV1 285 aaKnown RBP17.8■□□□□ 0.44
SNED1-208ENST00000466618 FHOD1Q9Y613 1164 aa17.8■□□□□ 0.44
SNED1-208ENST00000466618 ZNF589Q86UQ0 364 aaPredicted RBP17.8■□□□□ 0.44
SNED1-208ENST00000466618 RUFY2Q8WXA3 655 aa17.8■□□□□ 0.44
SNED1-208ENST00000466618 ZBED3Q96IU2 234 aaPredicted RBP17.8■□□□□ 0.44
SNED1-208ENST00000466618 HDAC9Q9UKV0 1011 aa17.8■□□□□ 0.44
SNED1-208ENST00000466618 PCDHAC2Q9Y5I4 1007 aa17.8■□□□□ 0.44
SNED1-208ENST00000466618 KRT85P78386 507 aa17.79■□□□□ 0.44
SNED1-208ENST00000466618 MICALL2Q8IY33 904 aa17.79■□□□□ 0.44
SNED1-208ENST00000466618 MIGA1Q8NAN2 632 aa17.79■□□□□ 0.44
SNED1-208ENST00000466618 DNAJC25Q9H1X3 360 aa17.79■□□□□ 0.44
SNED1-208ENST00000466618 CLSTN2Q9H4D0 955 aa17.79■□□□□ 0.44
SNED1-208ENST00000466618 ZNF165P49910 485 aa17.79■□□□□ 0.44
SNED1-208ENST00000466618 RAD51AP2Q09MP3 1159 aa17.79■□□□□ 0.44
SNED1-208ENST00000466618 BMS1Q14692 1282 aaKnown RBP17.79■□□□□ 0.44
SNED1-208ENST00000466618 CFAP100Q494V2 611 aa17.79■□□□□ 0.44
SNED1-208ENST00000466618 STRBPQ96SI9 672 aaKnown RBP17.79■□□□□ 0.44
SNED1-208ENST00000466618 GPAA1O43292 621 aa17.78■□□□□ 0.44
SNED1-208ENST00000466618 CASTP20810 708 aaKnown RBP17.78■□□□□ 0.44
SNED1-208ENST00000466618 BTDP43251 543 aa17.78■□□□□ 0.44
SNED1-208ENST00000466618 RHBDL3P58872 404 aa17.78■□□□□ 0.44
SNED1-208ENST00000466618 DYNLL1P63167 89 aaKnown RBP17.78■□□□□ 0.44
SNED1-208ENST00000466618 CCZ1BP86790 482 aa17.78■□□□□ 0.44
SNED1-208ENST00000466618 CCZ1P86791 482 aaPredicted RBP17.78■□□□□ 0.44
SNED1-208ENST00000466618 FAM173BQ6P4H8 233 aa17.78■□□□□ 0.44
SNED1-208ENST00000466618 CCDC129Q6ZRS4 1044 aa17.78■□□□□ 0.44
SNED1-208ENST00000466618 LCORLQ8N3X6 602 aa17.78■□□□□ 0.44
SNED1-208ENST00000466618 GTF3C6Q969F1 213 aa17.78■□□□□ 0.44
SNED1-208ENST00000466618 MYOZ2Q9NPC6 264 aa17.78■□□□□ 0.44
SNED1-208ENST00000466618 AATFQ9NY61 560 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNED1-208ENST00000466618 MAGEB6P1A0A0J9YX57 407 aa17.77■□□□□ 0.44
SNED1-208ENST00000466618 SPDYE2BA6NHP3 402 aa17.77■□□□□ 0.44
SNED1-208ENST00000466618 NEMFO60524 1076 aa17.77■□□□□ 0.44
SNED1-208ENST00000466618 MBD4O95243 580 aa17.77■□□□□ 0.44
SNED1-208ENST00000466618 SPDYE6P0CI01 402 aa17.77■□□□□ 0.44
SNED1-208ENST00000466618 RNF20Q5VTR2 975 aa17.77■□□□□ 0.44
SNED1-208ENST00000466618 SARM1Q6SZW1 724 aa17.77■□□□□ 0.44
SNED1-208ENST00000466618 DDX19AQ9NUU7 478 aaKnown RBP17.77■□□□□ 0.44
SNED1-208ENST00000466618 FOXP2O15409 715 aa17.77■□□□□ 0.43
SNED1-208ENST00000466618 BAG3O95817 575 aa17.77■□□□□ 0.43
SNED1-208ENST00000466618 EGFRP00533 1210 aa17.77■□□□□ 0.43
SNED1-208ENST00000466618 PLA2G4AP47712 749 aa17.77■□□□□ 0.43
SNED1-208ENST00000466618 CDC37L1Q7L3B6 337 aa17.77■□□□□ 0.43
SNED1-208ENST00000466618 CERS3Q8IU89 383 aa17.77■□□□□ 0.43
SNED1-208ENST00000466618 AIDAQ96BJ3 306 aa17.77■□□□□ 0.43
SNED1-208ENST00000466618 PRMT6Q96LA8 375 aaPredicted RBP17.77■□□□□ 0.43
SNED1-208ENST00000466618 ARMT1Q9H993 441 aa17.77■□□□□ 0.43
SNED1-208ENST00000466618 KCND1Q9NSA2 647 aa17.77■□□□□ 0.43
SNED1-208ENST00000466618 MYH7P12883 1935 aa17.76■□□□□ 0.43
SNED1-208ENST00000466618 SKILP12757 684 aa17.76■□□□□ 0.43
SNED1-208ENST00000466618 EPS15P42566 896 aa17.76■□□□□ 0.43
SNED1-208ENST00000466618 CCAR2Q8N163 923 aaKnown RBP17.76■□□□□ 0.43
SNED1-208ENST00000466618 CLCN6P51797 869 aa17.76■□□□□ 0.43
SNED1-208ENST00000466618 DLGAP5Q15398 846 aa17.76■□□□□ 0.43
SNED1-208ENST00000466618 MRFAP1L1Q96HT8 127 aa17.76■□□□□ 0.43
SNED1-208ENST00000466618 SH2B1Q9NRF2 756 aaPredicted RBP17.76■□□□□ 0.43
SNED1-208ENST00000466618 TRMT1Q9NXH9 659 aaKnown RBP17.76■□□□□ 0.43
SNED1-208ENST00000466618 POTECB2RU33 542 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 H7C1D1 291 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 RBM5P52756 815 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNED1-208ENST00000466618 IQCB1Q15051 598 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 ME3Q16798 604 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 CDC42EP5Q6NZY7 148 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 SAMD7Q7Z3H4 446 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 FERMT3Q86UX7 667 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 LRRN4CLQ8ND94 238 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 SH3RF3Q8TEJ3 882 aaPredicted RBP17.75■□□□□ 0.43
SNED1-208ENST00000466618 L2HGDHQ9H9P8 463 aa17.75■□□□□ 0.43
SNED1-208ENST00000466618 WNT10BO00744 389 aa17.74■□□□□ 0.43
SNED1-208ENST00000466618 PNMA6AP0CW24 399 aaPredicted RBP17.74■□□□□ 0.43
SNED1-208ENST00000466618 ERCC6LQ2NKX8 1250 aa17.74■□□□□ 0.43
SNED1-208ENST00000466618 ZSCAN31Q96LW9 406 aaPredicted RBP17.74■□□□□ 0.43
SNED1-208ENST00000466618 PDRG1Q9NUG6 133 aa17.74■□□□□ 0.43
SNED1-208ENST00000466618 ADAMTSL1Q8N6G6 1762 aa17.74■□□□□ 0.43
SNED1-208ENST00000466618 CCDC69A6NI79 296 aa17.74■□□□□ 0.43
SNED1-208ENST00000466618 NR1I2O75469 434 aa17.74■□□□□ 0.43
SNED1-208ENST00000466618 PLCG2P16885 1265 aa17.74■□□□□ 0.43
SNED1-208ENST00000466618 ADCK5Q3MIX3 580 aa17.74■□□□□ 0.43
SNED1-208ENST00000466618 PRKAB2O43741 272 aa17.73■□□□□ 0.43
SNED1-208ENST00000466618 GNAT2P19087 354 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms